EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000232 (Gene tree)
Gene ID: 109521024
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: ras-related protein Rab-11A-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 9192 bases
Position: chrKV880104.1:750045-759236
Accession: 109521024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000020794	MMR_HSR1	PF01926.23	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000005268	-	3228	XM_019878626	ENSHCOP00000020794	216 (aa)	XP_019734185	UPI00094E1779

Gene Model

Click here to download ENSHCOG00000000232's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000232	rab11al	99	80.275	ENSHCOG00000000985	-	99	80.275
ENSHCOG00000000232	rab11al	95	35.349	ENSHCOG00000015692	si:dkey-34d22.5	97	35.349
ENSHCOG00000000232	rab11al	81	40.000	ENSHCOG00000012376	rab12	81	38.693
ENSHCOG00000000232	rab11al	80	50.289	ENSHCOG00000013180	-	80	50.289
ENSHCOG00000000232	rab11al	79	35.912	ENSHCOG00000003569	rab33ba	75	35.912
ENSHCOG00000000232	rab11al	75	36.646	ENSHCOG00000004404	rab41	76	36.646
ENSHCOG00000000232	rab11al	77	34.940	ENSHCOG00000013130	rab6bb	80	34.940
ENSHCOG00000000232	rab11al	73	40.491	ENSHCOG00000004726	rab33a	70	40.491
ENSHCOG00000000232	rab11al	71	30.909	ENSHCOG00000019709	rasl11a	66	30.909
ENSHCOG00000000232	rab11al	77	53.012	ENSHCOG00000019224	rab14	77	53.012
ENSHCOG00000000232	rab11al	94	33.971	ENSHCOG00000004086	rab9a	97	33.971
ENSHCOG00000000232	rab11al	79	34.503	ENSHCOG00000014711	rab6ba	82	34.503
ENSHCOG00000000232	rab11al	58	44.800	ENSHCOG00000010707	rab30	68	44.800
ENSHCOG00000000232	rab11al	73	42.038	ENSHCOG00000001145	rab22a	81	42.038
ENSHCOG00000000232	rab11al	55	30.894	ENSHCOG00000014829	-	60	30.894
ENSHCOG00000000232	rab11al	82	45.251	ENSHCOG00000007440	rab13	97	45.455
ENSHCOG00000000232	rab11al	78	38.728	ENSHCOG00000004225	-	83	38.728
ENSHCOG00000000232	rab11al	75	42.593	ENSHCOG00000017086	RAB15	76	42.593
ENSHCOG00000000232	rab11al	95	38.835	ENSHCOG00000017123	-	93	38.835
ENSHCOG00000000232	rab11al	78	38.728	ENSHCOG00000016322	RAB7A	82	38.728
ENSHCOG00000000232	rab11al	82	38.333	ENSHCOG00000009133	zgc:101559	76	38.333
ENSHCOG00000000232	rab11al	64	34.965	ENSHCOG00000013468	rab20	53	34.965
ENSHCOG00000000232	rab11al	96	46.377	ENSHCOG00000019468	rab1ba	99	46.377
ENSHCOG00000000232	rab11al	76	39.412	ENSHCOG00000005802	RAB9A	79	39.412
ENSHCOG00000000232	rab11al	94	33.005	ENSHCOG00000006550	-	93	33.005
ENSHCOG00000000232	rab11al	75	46.914	ENSHCOG00000002217	rab18b	79	46.914
ENSHCOG00000000232	rab11al	73	48.408	ENSHCOG00000004662	rab5c	70	48.408
ENSHCOG00000000232	rab11al	94	42.233	ENSHCOG00000003981	RAB39B	96	42.233
ENSHCOG00000000232	rab11al	79	53.216	ENSHCOG00000014428	rab2a	99	46.698
ENSHCOG00000000232	rab11al	99	86.047	ENSHCOG00000005652	rab11a	99	86.047
ENSHCOG00000000232	rab11al	69	34.667	ENSHCOG00000011080	kras	85	35.802
ENSHCOG00000000232	rab11al	96	46.154	ENSHCOG00000001137	rab1ab	99	46.154
ENSHCOG00000000232	rab11al	75	39.521	ENSHCOG00000005024	rab9b	82	39.521
ENSHCOG00000000232	rab11al	94	41.262	ENSHCOG00000019732	-	96	41.262
ENSHCOG00000000232	rab11al	69	40.909	ENSHCOG00000012834	-	64	41.333
ENSHCOG00000000232	rab11al	95	40.777	ENSHCOG00000020238	-	87	40.777
ENSHCOG00000000232	rab11al	98	64.319	ENSHCOG00000013095	rab25a	99	64.319
ENSHCOG00000000232	rab11al	99	82.028	ENSHCOG00000002423	rab11bb	99	82.028
ENSHCOG00000000232	rab11al	99	38.785	ENSHCOG00000006538	si:dkey-16l2.16	100	38.785
ENSHCOG00000000232	rab11al	96	47.343	ENSHCOG00000010023	-	99	47.343
ENSHCOG00000000232	rab11al	64	34.783	ENSHCOG00000013919	rab23	90	33.511
ENSHCOG00000000232	rab11al	72	31.013	ENSHCOG00000018456	si:ch73-116o1.2	81	32.941
ENSHCOG00000000232	rab11al	79	32.955	ENSHCOG00000020527	rab34a	67	32.955
ENSHCOG00000000232	rab11al	94	66.337	ENSHCOG00000007187	rab25b	84	66.337
ENSHCOG00000000232	rab11al	99	82.870	ENSHCOG00000000954	-	99	82.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000232	rab11al	100	93.981	ENSAPOG00000008251	rab11al	100	93.981	Acanthochromis_polyacanthus
ENSHCOG00000000232	rab11al	100	96.296	ENSACIG00000017403	rab11al	100	96.296	Amphilophus_citrinellus
ENSHCOG00000000232	rab11al	100	96.296	ENSAOCG00000015678	rab11al	100	96.296	Amphiprion_ocellaris
ENSHCOG00000000232	rab11al	100	96.296	ENSAPEG00000022135	rab11al	100	96.296	Amphiprion_percula
ENSHCOG00000000232	rab11al	100	95.833	ENSATEG00000006156	rab11al	100	95.833	Anabas_testudineus
ENSHCOG00000000232	rab11al	100	96.296	ENSACLG00000010268	rab11al	100	96.296	Astatotilapia_calliptera
ENSHCOG00000000232	rab11al	94	84.729	ENSAMXG00000024632	rab11al	93	84.729	Astyanax_mexicanus
ENSHCOG00000000232	rab11al	94	79.208	ENSCPBG00000025819	-	99	79.208	Chrysemys_picta_bellii
ENSHCOG00000000232	rab11al	100	94.907	ENSCSEG00000011996	rab11al	100	94.907	Cynoglossus_semilaevis
ENSHCOG00000000232	rab11al	100	93.981	ENSCVAG00000020016	rab11al	100	93.981	Cyprinodon_variegatus
ENSHCOG00000000232	rab11al	100	90.741	ENSDARG00000014340	rab11al	100	90.741	Danio_rerio
ENSHCOG00000000232	rab11al	100	93.519	ENSELUG00000012035	rab11al	100	93.519	Esox_lucius
ENSHCOG00000000232	rab11al	99	80.465	ENSFALG00000002594	-	91	80.465	Ficedula_albicollis
ENSHCOG00000000232	rab11al	96	93.750	ENSFHEG00000000832	rab11al	99	93.750	Fundulus_heteroclitus
ENSHCOG00000000232	rab11al	94	88.614	ENSGMOG00000006450	rab11al	100	88.614	Gadus_morhua
ENSHCOG00000000232	rab11al	99	78.140	ENSGALG00000037802	-	50	78.140	Gallus_gallus
ENSHCOG00000000232	rab11al	100	93.056	ENSGAFG00000021725	rab11al	100	93.056	Gambusia_affinis
ENSHCOG00000000232	rab11al	100	95.370	ENSGACG00000013259	rab11al	100	95.370	Gasterosteus_aculeatus
ENSHCOG00000000232	rab11al	99	80.000	ENSGAGG00000020702	-	99	80.000	Gopherus_agassizii
ENSHCOG00000000232	rab11al	100	96.296	ENSHBUG00000009333	rab11al	100	96.296	Haplochromis_burtoni
ENSHCOG00000000232	rab11al	100	91.667	ENSIPUG00000006091	RAB11A	100	91.667	Ictalurus_punctatus
ENSHCOG00000000232	rab11al	100	90.278	ENSKMAG00000015516	rab11al	100	90.278	Kryptolebias_marmoratus
ENSHCOG00000000232	rab11al	100	93.519	ENSLBEG00000016417	rab11al	100	93.519	Labrus_bergylta
ENSHCOG00000000232	rab11al	99	78.605	ENSLACG00000011380	rab11al	99	78.605	Latimeria_chalumnae
ENSHCOG00000000232	rab11al	100	92.593	ENSLOCG00000008865	rab11al	100	92.593	Lepisosteus_oculatus
ENSHCOG00000000232	rab11al	100	96.296	ENSMAMG00000010278	rab11al	100	96.296	Mastacembelus_armatus
ENSHCOG00000000232	rab11al	100	96.296	ENSMZEG00005017514	rab11al	100	96.296	Maylandia_zebra
ENSHCOG00000000232	rab11al	75	88.820	ENSMGAG00000004720	-	95	88.820	Meleagris_gallopavo
ENSHCOG00000000232	rab11al	79	95.906	ENSMMOG00000017117	rab11al	84	95.906	Mola_mola
ENSHCOG00000000232	rab11al	100	93.519	ENSMALG00000004093	rab11al	100	93.519	Monopterus_albus
ENSHCOG00000000232	rab11al	100	95.833	ENSNBRG00000005116	rab11al	100	95.833	Neolamprologus_brichardi
ENSHCOG00000000232	rab11al	100	96.759	ENSONIG00000002281	rab11al	100	96.759	Oreochromis_niloticus
ENSHCOG00000000232	rab11al	100	95.370	ENSORLG00000016126	rab11al	100	95.370	Oryzias_latipes
ENSHCOG00000000232	rab11al	100	95.370	ENSORLG00020013747	rab11al	100	95.370	Oryzias_latipes_hni
ENSHCOG00000000232	rab11al	100	95.370	ENSORLG00015019591	rab11al	100	95.370	Oryzias_latipes_hsok
ENSHCOG00000000232	rab11al	100	93.981	ENSOMEG00000020271	rab11al	100	93.981	Oryzias_melastigma
ENSHCOG00000000232	rab11al	100	89.815	ENSPKIG00000020893	rab11al	100	89.815	Paramormyrops_kingsleyae
ENSHCOG00000000232	rab11al	99	78.605	ENSPSIG00000013143	-	99	78.605	Pelodiscus_sinensis
ENSHCOG00000000232	rab11al	100	90.278	ENSPMGG00000004220	rab11al	100	90.278	Periophthalmus_magnuspinnatus
ENSHCOG00000000232	rab11al	100	93.056	ENSPFOG00000011316	rab11al	100	93.056	Poecilia_formosa
ENSHCOG00000000232	rab11al	100	93.056	ENSPLAG00000007986	rab11al	100	93.056	Poecilia_latipinna
ENSHCOG00000000232	rab11al	100	93.056	ENSPMEG00000000804	rab11al	100	93.056	Poecilia_mexicana
ENSHCOG00000000232	rab11al	100	93.056	ENSPREG00000017324	rab11al	100	93.056	Poecilia_reticulata
ENSHCOG00000000232	rab11al	100	96.296	ENSPNYG00000018244	rab11al	100	96.296	Pundamilia_nyererei
ENSHCOG00000000232	rab11al	100	91.204	ENSPNAG00000029085	rab11al	100	91.204	Pygocentrus_nattereri
ENSHCOG00000000232	rab11al	100	91.204	ENSSFOG00015008618	rab11al	100	91.204	Scleropages_formosus
ENSHCOG00000000232	rab11al	100	95.370	ENSSMAG00000016206	rab11al	100	95.370	Scophthalmus_maximus
ENSHCOG00000000232	rab11al	100	96.296	ENSSDUG00000006278	rab11al	100	96.296	Seriola_dumerili
ENSHCOG00000000232	rab11al	100	96.296	ENSSLDG00000012116	rab11al	100	96.296	Seriola_lalandi_dorsalis
ENSHCOG00000000232	rab11al	98	78.302	ENSSPUG00000002526	-	98	78.302	Sphenodon_punctatus
ENSHCOG00000000232	rab11al	100	95.370	ENSSPAG00000012044	rab11al	100	95.370	Stegastes_partitus
ENSHCOG00000000232	rab11al	94	82.673	ENSTGUG00000003680	-	99	82.673	Taeniopygia_guttata
ENSHCOG00000000232	rab11al	99	94.836	ENSTRUG00000007556	rab11al	99	94.836	Takifugu_rubripes
ENSHCOG00000000232	rab11al	100	93.056	ENSXCOG00000004226	rab11al	100	93.056	Xiphophorus_couchianus
ENSHCOG00000000232	rab11al	100	93.056	ENSXMAG00000027071	rab11al	100	93.056	Xiphophorus_maculatus