EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000000351 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Plus strand
Length
8051 bases
Position
chrKV879709.1:255809-263859
Accession
109517068
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000009787tRNA_anti-codonPF01336.251.3e-1111
ENSHCOP00000009780tRNA_anti-codonPF01336.251.3e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000015985RPA1 (1 of many)-2011701-ENSHCOP00000009780566 (aa)--
ENSHCOT00000016023RPA1 (1 of many)-2021719XM_019871981ENSHCOP00000009787572 (aa)XP_019727540-
Gene Model
Click here to download ENSHCOG00000000351's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000351's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000000351RPA19842.020ENSHCOG00000001401rpa19942.414
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000000351RPA19844.868ENSAPOG00000011658rpa19947.048Acanthochromis_polyacanthus
ENSHCOG00000000351RPA19555.896ENSAPOG00000019409RPA18555.896Acanthochromis_polyacanthus
ENSHCOG00000000351RPA19744.828ENSAMEG00000007706RPA19844.828Ailuropoda_melanoleuca
ENSHCOG00000000351RPA19350.427ENSACIG00000012881RPA19850.427Amphilophus_citrinellus
ENSHCOG00000000351RPA19341.536ENSACIG00000007277rpa19841.536Amphilophus_citrinellus
ENSHCOG00000000351RPA19844.868ENSAOCG00000023376rpa19946.702Amphiprion_ocellaris
ENSHCOG00000000351RPA19953.132ENSAOCG00000009003RPA19353.132Amphiprion_ocellaris
ENSHCOG00000000351RPA19953.780ENSAPEG00000019132RPA19153.780Amphiprion_percula
ENSHCOG00000000351RPA19844.868ENSAPEG00000008634rpa19946.881Amphiprion_percula
ENSHCOG00000000351RPA19345.745ENSATEG00000022024rpa19945.745Anabas_testudineus
ENSHCOG00000000351RPA19857.783ENSATEG00000006443RPA18957.783Anabas_testudineus
ENSHCOG00000000351RPA18647.647ENSAPLG00000012442RPA18047.904Anas_platyrhynchos
ENSHCOG00000000351RPA19943.023ENSACAG00000014490RPA19943.927Anolis_carolinensis
ENSHCOG00000000351RPA19647.368ENSANAG00000023456RPA19947.368Aotus_nancymaae
ENSHCOG00000000351RPA19857.042ENSACLG00000005223RPA110048.223Astatotilapia_calliptera
ENSHCOG00000000351RPA19346.619ENSACLG00000006640rpa19946.786Astatotilapia_calliptera
ENSHCOG00000000351RPA19945.888ENSAMXG00000008418rpa19948.649Astyanax_mexicanus
ENSHCOG00000000351RPA19843.902ENSBTAG00000009711RPA19943.902Bos_taurus
ENSHCOG00000000351RPA17430.374WBGene00017546rpa-16430.374Caenorhabditis_elegans
ENSHCOG00000000351RPA19944.516ENSCJAG00000001848RPA19944.677Callithrix_jacchus
ENSHCOG00000000351RPA19844.318ENSCAFG00000019249RPA19944.318Canis_familiaris
ENSHCOG00000000351RPA19844.318ENSCAFG00020009847RPA19944.318Canis_lupus_dingo
ENSHCOG00000000351RPA19844.065ENSCHIG00000026308RPA19944.065Capra_hircus
ENSHCOG00000000351RPA19943.710ENSTSYG00000003482-9943.710Carlito_syrichta
ENSHCOG00000000351RPA19945.161ENSCPOG00000000035RPA19945.161Cavia_porcellus
ENSHCOG00000000351RPA19938.149ENSCCAG00000010981RPA19938.312Cebus_capucinus
ENSHCOG00000000351RPA19941.789ENSCLAG00000015045-9941.789Chinchilla_lanigera
ENSHCOG00000000351RPA19944.212ENSCLAG00000005185-9944.212Chinchilla_lanigera
ENSHCOG00000000351RPA19938.636ENSCSAG00000013833RPA19938.149Chlorocebus_sabaeus
ENSHCOG00000000351RPA17850.111ENSCHOG00000009454-9950.111Choloepus_hoffmanni
ENSHCOG00000000351RPA19244.905ENSCHOG00000013540-9844.905Choloepus_hoffmanni
ENSHCOG00000000351RPA19944.194ENSCPBG00000020377RPA19945.043Chrysemys_picta_bellii
ENSHCOG00000000351RPA19834.323ENSCING00000023482-9934.375Ciona_intestinalis
ENSHCOG00000000351RPA19747.260ENSCANG00000030911RPA19947.260Colobus_angolensis_palliatus
ENSHCOG00000000351RPA19844.355ENSCGRG00001008197Rpa19944.516Cricetulus_griseus_chok1gshd
ENSHCOG00000000351RPA18049.569ENSCGRG00000000582Rpa18849.569Cricetulus_griseus_crigri
ENSHCOG00000000351RPA19845.194ENSCSEG00000013066rpa19945.408Cynoglossus_semilaevis
ENSHCOG00000000351RPA19854.933ENSCSEG00000012726RPA19848.034Cynoglossus_semilaevis
ENSHCOG00000000351RPA19550.455ENSCVAG00000013446-8851.270Cyprinodon_variegatus
ENSHCOG00000000351RPA19844.463ENSCVAG00000019431rpa19946.057Cyprinodon_variegatus
ENSHCOG00000000351RPA19946.040ENSDARG00000003938rpa19946.446Danio_rerio
ENSHCOG00000000351RPA19744.715ENSDNOG00000017218RPA19844.715Dasypus_novemcinctus
ENSHCOG00000000351RPA19944.103ENSDORG00000006199Rpa19944.194Dipodomys_ordii
ENSHCOG00000000351RPA19135.009FBgn0010173RpA-709135.368Drosophila_melanogaster
ENSHCOG00000000351RPA17952.688ENSETEG00000017608RPA18252.688Echinops_telfairi
ENSHCOG00000000351RPA19646.585ENSEASG00005009372RPA19946.847Equus_asinus_asinus
ENSHCOG00000000351RPA19844.228ENSECAG00000023886RPA19944.228Equus_caballus
ENSHCOG00000000351RPA17351.190ENSEEUG00000002186-6850.827Erinaceus_europaeus
ENSHCOG00000000351RPA18748.425ENSELUG00000006136RPA19949.209Esox_lucius
ENSHCOG00000000351RPA19944.992ENSELUG00000021071rpa19945.320Esox_lucius
ENSHCOG00000000351RPA19844.246ENSFCAG00000006306RPA19944.246Felis_catus
ENSHCOG00000000351RPA19942.926ENSFALG00000006575RPA19943.528Ficedula_albicollis
ENSHCOG00000000351RPA19943.730ENSFDAG00000007720RPA110043.730Fukomys_damarensis
ENSHCOG00000000351RPA19344.930ENSFHEG00000003580rpa19445.026Fundulus_heteroclitus
ENSHCOG00000000351RPA19945.517ENSGMOG00000010382rpa19945.517Gadus_morhua
ENSHCOG00000000351RPA19943.639ENSGALG00000003072RPA19943.922Gallus_gallus
ENSHCOG00000000351RPA19744.500ENSGAFG00000012916rpa19944.500Gambusia_affinis
ENSHCOG00000000351RPA19855.079ENSGAFG00000020953RPA19452.743Gambusia_affinis
ENSHCOG00000000351RPA19844.949ENSGACG00000010856rpa19945.008Gasterosteus_aculeatus
ENSHCOG00000000351RPA19943.800ENSGAGG00000013611RPA19943.800Gopherus_agassizii
ENSHCOG00000000351RPA19946.599ENSGGOG00000014186RPA19946.599Gorilla_gorilla
ENSHCOG00000000351RPA19944.737ENSHBUG00000017773rpa19944.737Haplochromis_burtoni
ENSHCOG00000000351RPA19546.516ENSHBUG00000009348RPA19946.516Haplochromis_burtoni
ENSHCOG00000000351RPA19944.051ENSHGLG00000008846RPA110044.051Heterocephalus_glaber_female
ENSHCOG00000000351RPA19944.051ENSHGLG00100017755-10044.051Heterocephalus_glaber_male
ENSHCOG00000000351RPA19940.000ENSHGLG00100000799-9940.000Heterocephalus_glaber_male
ENSHCOG00000000351RPA19239.085ENSHGLG00100002005-9338.840Heterocephalus_glaber_male
ENSHCOG00000000351RPA19945.188ENSIPUG00000004400rpa110045.514Ictalurus_punctatus
ENSHCOG00000000351RPA19342.373ENSSTOG00000022475RPA19842.373Ictidomys_tridecemlineatus
ENSHCOG00000000351RPA19246.034ENSJJAG00000000876Rpa19646.034Jaculus_jaculus
ENSHCOG00000000351RPA19843.586ENSKMAG00000005605rpa19944.171Kryptolebias_marmoratus
ENSHCOG00000000351RPA19949.592ENSKMAG00000000234RPA19949.592Kryptolebias_marmoratus
ENSHCOG00000000351RPA19945.470ENSLBEG00000021604rpa19945.517Labrus_bergylta
ENSHCOG00000000351RPA19856.368ENSLBEG00000002281RPA18453.132Labrus_bergylta
ENSHCOG00000000351RPA18047.122ENSLACG00000007210RPA19347.122Latimeria_chalumnae
ENSHCOG00000000351RPA19944.918ENSLOCG00000006397rpa19944.918Lepisosteus_oculatus
ENSHCOG00000000351RPA19843.780ENSLAFG00000015354RPA19843.780Loxodonta_africana
ENSHCOG00000000351RPA18044.379ENSMFAG00000036138-9944.379Macaca_fascicularis
ENSHCOG00000000351RPA19942.276ENSMMUG00000002442-9942.276Macaca_mulatta
ENSHCOG00000000351RPA19844.845ENSMMUG00000011604-9944.845Macaca_mulatta
ENSHCOG00000000351RPA19943.229ENSMNEG00000029837-9943.229Macaca_nemestrina
ENSHCOG00000000351RPA19246.447ENSMNEG00000031632-9646.447Macaca_nemestrina
ENSHCOG00000000351RPA19547.921ENSMLEG00000038768-9943.167Mandrillus_leucophaeus
ENSHCOG00000000351RPA19956.440ENSMAMG00000020097RPA18356.840Mastacembelus_armatus
ENSHCOG00000000351RPA19743.688ENSMAMG00000017993rpa19947.339Mastacembelus_armatus
ENSHCOG00000000351RPA19944.737ENSMZEG00005007551rpa19945.611Maylandia_zebra
ENSHCOG00000000351RPA19857.042ENSMZEG00005024731RPA110048.223Maylandia_zebra
ENSHCOG00000000351RPA19344.274ENSMGAG00000005315RPA19444.274Meleagris_gallopavo
ENSHCOG00000000351RPA19644.850ENSMAUG00000010474Rpa19944.850Mesocricetus_auratus
ENSHCOG00000000351RPA19943.942ENSMICG00000012867RPA19944.156Microcebus_murinus
ENSHCOG00000000351RPA19943.548ENSMOCG00000013019Rpa19943.548Microtus_ochrogaster
ENSHCOG00000000351RPA19751.845ENSMMOG00000010868RPA19851.845Mola_mola
ENSHCOG00000000351RPA19843.927ENSMMOG00000014292rpa19943.927Mola_mola
ENSHCOG00000000351RPA19943.317ENSMODG00000010549RPA19943.317Monodelphis_domestica
ENSHCOG00000000351RPA19951.797ENSMALG00000001208RPA18451.797Monopterus_albus
ENSHCOG00000000351RPA19844.352ENSMALG00000011453rpa19944.983Monopterus_albus
ENSHCOG00000000351RPA19943.499MGP_CAROLIEiJ_G0016734Rpa19944.051Mus_caroli
ENSHCOG00000000351RPA19943.720ENSMUSG00000000751Rpa19943.700Mus_musculus
ENSHCOG00000000351RPA19943.450MGP_PahariEiJ_G0017871Rpa19943.730Mus_pahari
ENSHCOG00000000351RPA19943.651MGP_SPRETEiJ_G0017577Rpa19943.631Mus_spretus
ENSHCOG00000000351RPA19944.426ENSMPUG00000013119RPA19944.553Mustela_putorius_furo
ENSHCOG00000000351RPA19742.628ENSMLUG00000006113RPA19942.628Myotis_lucifugus
ENSHCOG00000000351RPA19245.862ENSNGAG00000004522Rpa19245.862Nannospalax_galili
ENSHCOG00000000351RPA19346.277ENSNBRG00000020595rpa19946.441Neolamprologus_brichardi
ENSHCOG00000000351RPA19349.648ENSNBRG00000009672RPA19249.648Neolamprologus_brichardi
ENSHCOG00000000351RPA19943.942ENSNLEG00000017149RPA19944.156Nomascus_leucogenys
ENSHCOG00000000351RPA18547.423ENSMEUG00000006714RPA18648.936Notamacropus_eugenii
ENSHCOG00000000351RPA19244.218ENSODEG00000009038RPA19444.218Octodon_degus
ENSHCOG00000000351RPA19943.891ENSONIG00000013135rpa19944.318Oreochromis_niloticus
ENSHCOG00000000351RPA19346.392ENSOANG00000010880RPA19546.392Ornithorhynchus_anatinus
ENSHCOG00000000351RPA19942.989ENSOCUG00000001504RPA19942.527Oryctolagus_cuniculus
ENSHCOG00000000351RPA19856.674ENSORLG00000003368RPA18656.674Oryzias_latipes
ENSHCOG00000000351RPA19844.776ENSORLG00000004856rpa19945.167Oryzias_latipes
ENSHCOG00000000351RPA19845.108ENSORLG00020008980rpa19945.500Oryzias_latipes_hni
ENSHCOG00000000351RPA19856.440ENSORLG00020015284RPA18556.440Oryzias_latipes_hni
ENSHCOG00000000351RPA16954.453ENSORLG00015005867-8954.453Oryzias_latipes_hsok
ENSHCOG00000000351RPA19845.108ENSORLG00015013982rpa19945.500Oryzias_latipes_hsok
ENSHCOG00000000351RPA19656.132ENSORLG00015020383RPA19946.995Oryzias_latipes_hsok
ENSHCOG00000000351RPA19841.887ENSOMEG00000004704rpa19942.263Oryzias_melastigma
ENSHCOG00000000351RPA19449.738ENSOMEG00000011040RPA19949.738Oryzias_melastigma
ENSHCOG00000000351RPA19944.588ENSOGAG00000005581-9944.588Otolemur_garnettii
ENSHCOG00000000351RPA16950.311ENSOGAG00000029379-9350.311Otolemur_garnettii
ENSHCOG00000000351RPA19843.902ENSOARG00000014479RPA19943.902Ovis_aries
ENSHCOG00000000351RPA19944.265ENSPPAG00000039680RPA19944.318Pan_paniscus
ENSHCOG00000000351RPA19944.373ENSPPRG00000011807RPA19944.373Panthera_pardus
ENSHCOG00000000351RPA19844.498ENSPTIG00000007898RPA19944.498Panthera_tigris_altaica
ENSHCOG00000000351RPA19944.265ENSPTRG00000008539RPA19944.318Pan_troglodytes
ENSHCOG00000000351RPA19944.677ENSPANG00000024592RPA19944.677Papio_anubis
ENSHCOG00000000351RPA19845.033ENSPKIG00000008053rpa19944.426Paramormyrops_kingsleyae
ENSHCOG00000000351RPA19544.352ENSPSIG00000015617RPA19844.352Pelodiscus_sinensis
ENSHCOG00000000351RPA19845.983ENSPMGG00000011589rpa19946.325Periophthalmus_magnuspinnatus
ENSHCOG00000000351RPA19852.211ENSPMGG00000000543RPA19952.793Periophthalmus_magnuspinnatus
ENSHCOG00000000351RPA19843.669ENSPEMG00000021061Rpa19943.669Peromyscus_maniculatus_bairdii
ENSHCOG00000000351RPA19943.619ENSPCIG00000019049RPA19943.780Phascolarctos_cinereus
ENSHCOG00000000351RPA19246.316ENSPFOG00000003987rpa19446.316Poecilia_formosa
ENSHCOG00000000351RPA19253.641ENSPLAG00000008844-9746.400Poecilia_latipinna
ENSHCOG00000000351RPA19246.113ENSPLAG00000004984rpa19446.046Poecilia_latipinna
ENSHCOG00000000351RPA19254.126ENSPMEG00000003627-9746.720Poecilia_mexicana
ENSHCOG00000000351RPA19246.316ENSPMEG00000020602rpa19946.195Poecilia_mexicana
ENSHCOG00000000351RPA19956.440ENSPREG00000010119RPA18855.305Poecilia_reticulata
ENSHCOG00000000351RPA18742.857ENSPREG00000010174rpa19142.857Poecilia_reticulata
ENSHCOG00000000351RPA19944.426ENSPCOG00000001799RPA19944.426Propithecus_coquereli
ENSHCOG00000000351RPA19942.834ENSPVAG00000002149RPA19942.834Pteropus_vampyrus
ENSHCOG00000000351RPA19856.808ENSPNYG00000024165RPA110048.068Pundamilia_nyererei
ENSHCOG00000000351RPA19944.901ENSPNYG00000016316rpa19946.786Pundamilia_nyererei
ENSHCOG00000000351RPA19940.813ENSPNAG00000008599rpa19940.976Pygocentrus_nattereri
ENSHCOG00000000351RPA19944.355ENSRNOG00000003123Rpa19944.498Rattus_norvegicus
ENSHCOG00000000351RPA19944.677ENSRBIG00000036587RPA19944.677Rhinopithecus_bieti
ENSHCOG00000000351RPA19941.452ENSRROG00000043278RPA19941.452Rhinopithecus_roxellana
ENSHCOG00000000351RPA17335.294YAR007CRFA16835.116Saccharomyces_cerevisiae
ENSHCOG00000000351RPA19045.133ENSSBOG00000030233RPA19745.310Saimiri_boliviensis_boliviensis
ENSHCOG00000000351RPA19643.947ENSSHAG00000007969RPA19644.113Sarcophilus_harrisii
ENSHCOG00000000351RPA19846.346ENSSFOG00015005362rpa19246.346Scleropages_formosus
ENSHCOG00000000351RPA19954.329ENSSMAG00000019746RPA18954.329Scophthalmus_maximus
ENSHCOG00000000351RPA19557.547ENSSDUG00000016358RPA18954.967Seriola_dumerili
ENSHCOG00000000351RPA19844.132ENSSDUG00000011949rpa19944.186Seriola_dumerili
ENSHCOG00000000351RPA19843.802ENSSLDG00000011806rpa19944.020Seriola_lalandi_dorsalis
ENSHCOG00000000351RPA19557.547ENSSLDG00000020784RPA18754.989Seriola_lalandi_dorsalis
ENSHCOG00000000351RPA18042.262ENSSARG00000007506RPA18342.262Sorex_araneus
ENSHCOG00000000351RPA19444.597ENSSPUG00000007223RPA19644.597Sphenodon_punctatus
ENSHCOG00000000351RPA19843.543ENSSPAG00000009903rpa19943.760Stegastes_partitus
ENSHCOG00000000351RPA19852.261ENSSPAG00000011165RPA19952.261Stegastes_partitus
ENSHCOG00000000351RPA19846.575ENSSSCG00000017822RPA19946.575Sus_scrofa
ENSHCOG00000000351RPA19943.226ENSTGUG00000005775RPA19943.831Taeniopygia_guttata
ENSHCOG00000000351RPA19854.953ENSTRUG00000000405RPA18254.953Takifugu_rubripes
ENSHCOG00000000351RPA19846.090ENSTRUG00000003616rpa19946.090Takifugu_rubripes
ENSHCOG00000000351RPA19844.715ENSTNIG00000016199rpa19944.935Tetraodon_nigroviridis
ENSHCOG00000000351RPA17849.011ENSTBEG00000002709RPA17349.011Tupaia_belangeri
ENSHCOG00000000351RPA19843.252ENSTTRG00000001169RPA19943.252Tursiops_truncatus
ENSHCOG00000000351RPA18765.385ENSUAMG00000015676RPA19765.385Ursus_americanus
ENSHCOG00000000351RPA19749.024ENSUMAG00000009328RPA19946.949Ursus_maritimus
ENSHCOG00000000351RPA19243.351ENSVPAG00000009443RPA19343.351Vicugna_pacos
ENSHCOG00000000351RPA19844.805ENSVVUG00000021715RPA19944.805Vulpes_vulpes
ENSHCOG00000000351RPA19843.607ENSXETG00000013538rpa19943.934Xenopus_tropicalis
ENSHCOG00000000351RPA18944.364ENSXCOG00000010068rpa19444.364Xiphophorus_couchianus
ENSHCOG00000000351RPA19351.268ENSXCOG00000009899-9951.268Xiphophorus_couchianus
ENSHCOG00000000351RPA19744.684ENSXMAG00000004102rpa19945.907Xiphophorus_maculatus
ENSHCOG00000000351RPA19952.743ENSXMAG00000010333RPA18852.743Xiphophorus_maculatus

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