EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000449 (Gene tree)
Gene ID: 109519346
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 7945 bases
Position: chrKV880069.1:823818-831762
Accession: 109519346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012880	RRM_1	PF00076.22	1.4e-29	1	3
ENSHCOP00000012880	RRM_1	PF00076.22	1.4e-29	2	3
ENSHCOP00000012880	RRM_1	PF00076.22	1.4e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020041	-	2437	XM_019875800	ENSHCOP00000012880	737 (aa)	XP_019731359	UPI00094E6868

Gene Model

Click here to download ENSHCOG00000000449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000449	raver1	91	50.543	ENSG00000161847	RAVER1	98	49.932	Homo_sapiens
ENSHCOG00000000449	raver1	96	76.634	ENSAPOG00000017267	raver1	92	76.639	Acanthochromis_polyacanthus
ENSHCOG00000000449	raver1	78	57.143	ENSAMEG00000011738	RAVER1	77	62.963	Ailuropoda_melanoleuca
ENSHCOG00000000449	raver1	96	77.159	ENSAOCG00000005128	raver1	97	77.397	Amphiprion_ocellaris
ENSHCOG00000000449	raver1	96	77.178	ENSAPEG00000010854	raver1	100	77.415	Amphiprion_percula
ENSHCOG00000000449	raver1	96	78.255	ENSATEG00000021004	raver1	100	76.944	Anabas_testudineus
ENSHCOG00000000449	raver1	65	55.620	ENSACAG00000008386	-	77	55.198	Anolis_carolinensis
ENSHCOG00000000449	raver1	79	58.513	ENSANAG00000028226	RAVER1	77	60.494	Aotus_nancymaae
ENSHCOG00000000449	raver1	98	76.223	ENSACLG00000018492	raver1	100	71.644	Astatotilapia_calliptera
ENSHCOG00000000449	raver1	95	62.207	ENSAMXG00000005132	raver1	100	60.992	Astyanax_mexicanus
ENSHCOG00000000449	raver1	61	82.000	ENSBTAG00000015721	RAVER1	98	52.354	Bos_taurus
ENSHCOG00000000449	raver1	66	58.268	ENSCJAG00000005671	RAVER1	96	50.000	Callithrix_jacchus
ENSHCOG00000000449	raver1	91	51.681	ENSCAFG00000017861	RAVER1	96	51.831	Canis_familiaris
ENSHCOG00000000449	raver1	91	51.681	ENSCAFG00020024449	RAVER1	98	51.831	Canis_lupus_dingo
ENSHCOG00000000449	raver1	67	65.770	ENSCHIG00000006718	RAVER1	79	65.333	Capra_hircus
ENSHCOG00000000449	raver1	84	49.407	ENSCAPG00000002269	RAVER1	79	60.494	Cavia_aperea
ENSHCOG00000000449	raver1	91	50.204	ENSCCAG00000031723	RAVER1	96	50.340	Cebus_capucinus
ENSHCOG00000000449	raver1	91	50.679	ENSCATG00000043863	RAVER1	96	50.068	Cercocebus_atys
ENSHCOG00000000449	raver1	89	49.930	ENSCLAG00000009336	RAVER1	96	50.345	Chinchilla_lanigera
ENSHCOG00000000449	raver1	89	51.272	ENSCPBG00000005349	-	96	50.604	Chrysemys_picta_bellii
ENSHCOG00000000449	raver1	89	50.413	ENSCGRG00001013260	-	98	49.932	Cricetulus_griseus_chok1gshd
ENSHCOG00000000449	raver1	89	50.413	ENSCGRG00000015138	-	98	49.932	Cricetulus_griseus_crigri
ENSHCOG00000000449	raver1	96	73.066	ENSCSEG00000021092	raver1	100	71.603	Cynoglossus_semilaevis
ENSHCOG00000000449	raver1	98	72.925	ENSCVAG00000013971	raver1	100	71.623	Cyprinodon_variegatus
ENSHCOG00000000449	raver1	96	63.245	ENSDARG00000052617	raver1	100	62.295	Danio_rerio
ENSHCOG00000000449	raver1	55	61.465	ENSDNOG00000035742	-	55	62.963	Dasypus_novemcinctus
ENSHCOG00000000449	raver1	55	61.314	ENSDORG00000010106	-	98	46.649	Dipodomys_ordii
ENSHCOG00000000449	raver1	50	50.538	ENSETEG00000008201	-	67	50.538	Echinops_telfairi
ENSHCOG00000000449	raver1	52	66.753	ENSEASG00005010544	-	65	68.524	Equus_asinus_asinus
ENSHCOG00000000449	raver1	67	65.441	ENSECAG00000024966	RAVER1	77	61.728	Equus_caballus
ENSHCOG00000000449	raver1	96	69.306	ENSELUG00000023287	raver1	100	68.587	Esox_lucius
ENSHCOG00000000449	raver1	55	64.390	ENSFCAG00000009435	RAVER1	67	64.390	Felis_catus
ENSHCOG00000000449	raver1	88	49.096	ENSFDAG00000015113	RAVER1	96	49.862	Fukomys_damarensis
ENSHCOG00000000449	raver1	92	66.478	ENSGMOG00000003649	raver1	99	66.667	Gadus_morhua
ENSHCOG00000000449	raver1	63	40.710	ENSGALG00000050608	-	51	39.832	Gallus_gallus
ENSHCOG00000000449	raver1	98	72.358	ENSGAFG00000015944	raver1	100	71.274	Gambusia_affinis
ENSHCOG00000000449	raver1	86	74.606	ENSGACG00000013818	raver1	88	76.969	Gasterosteus_aculeatus
ENSHCOG00000000449	raver1	87	61.503	ENSGAGG00000011748	-	96	68.280	Gopherus_agassizii
ENSHCOG00000000449	raver1	91	50.408	ENSGGOG00000006015	RAVER1	96	49.796	Gorilla_gorilla
ENSHCOG00000000449	raver1	97	76.197	ENSHBUG00000021210	raver1	100	71.721	Haplochromis_burtoni
ENSHCOG00000000449	raver1	96	64.266	ENSIPUG00000013153	raver1	100	64.071	Ictalurus_punctatus
ENSHCOG00000000449	raver1	91	50.479	ENSSTOG00000003241	RAVER1	98	50.612	Ictidomys_tridecemlineatus
ENSHCOG00000000449	raver1	91	51.015	ENSJJAG00000018219	-	98	50.270	Jaculus_jaculus
ENSHCOG00000000449	raver1	98	75.951	ENSKMAG00000017355	raver1	100	75.272	Kryptolebias_marmoratus
ENSHCOG00000000449	raver1	91	76.316	ENSLBEG00000008268	raver1	97	75.146	Labrus_bergylta
ENSHCOG00000000449	raver1	83	50.363	ENSLACG00000005809	-	80	63.855	Latimeria_chalumnae
ENSHCOG00000000449	raver1	90	61.633	ENSLOCG00000007500	raver1	100	59.466	Lepisosteus_oculatus
ENSHCOG00000000449	raver1	89	51.296	ENSLAFG00000003664	-	78	62.963	Loxodonta_africana
ENSHCOG00000000449	raver1	91	50.340	ENSMFAG00000037977	RAVER1	96	49.728	Macaca_fascicularis
ENSHCOG00000000449	raver1	91	50.340	ENSMMUG00000014897	RAVER1	96	49.728	Macaca_mulatta
ENSHCOG00000000449	raver1	91	50.340	ENSMNEG00000028390	RAVER1	96	49.728	Macaca_nemestrina
ENSHCOG00000000449	raver1	91	50.815	ENSMLEG00000041959	RAVER1	96	50.204	Mandrillus_leucophaeus
ENSHCOG00000000449	raver1	96	76.796	ENSMAMG00000012059	raver1	100	76.495	Mastacembelus_armatus
ENSHCOG00000000449	raver1	98	76.294	ENSMZEG00005019002	raver1	100	76.327	Maylandia_zebra
ENSHCOG00000000449	raver1	91	52.321	ENSMICG00000010326	RAVER1	98	52.192	Microcebus_murinus
ENSHCOG00000000449	raver1	89	50.617	ENSMOCG00000015553	-	98	49.523	Microtus_ochrogaster
ENSHCOG00000000449	raver1	96	76.796	ENSMMOG00000012093	raver1	100	75.886	Mola_mola
ENSHCOG00000000449	raver1	86	51.684	ENSMODG00000005584	-	86	51.556	Monodelphis_domestica
ENSHCOG00000000449	raver1	98	73.171	ENSMALG00000016569	raver1	100	73.777	Monopterus_albus
ENSHCOG00000000449	raver1	91	49.665	MGP_CAROLIEiJ_G0031860	-	98	49.933	Mus_caroli
ENSHCOG00000000449	raver1	89	49.658	ENSMUSG00000010205	Raver1	98	49.933	Mus_musculus
ENSHCOG00000000449	raver1	89	49.521	MGP_SPRETEiJ_G0032984	-	98	49.798	Mus_spretus
ENSHCOG00000000449	raver1	88	51.528	ENSMPUG00000006712	RAVER1	77	62.963	Mustela_putorius_furo
ENSHCOG00000000449	raver1	53	66.919	ENSMLUG00000012328	RAVER1	96	52.347	Myotis_lucifugus
ENSHCOG00000000449	raver1	53	63.224	ENSNGAG00000001260	-	98	48.626	Nannospalax_galili
ENSHCOG00000000449	raver1	98	67.439	ENSNBRG00000010139	raver1	100	67.439	Neolamprologus_brichardi
ENSHCOG00000000449	raver1	83	51.108	ENSMEUG00000003281	-	81	65.432	Notamacropus_eugenii
ENSHCOG00000000449	raver1	60	82.000	ENSODEG00000016260	RAVER1	68	63.990	Octodon_degus
ENSHCOG00000000449	raver1	90	76.036	ENSONIG00000001559	raver1	99	80.000	Oreochromis_niloticus
ENSHCOG00000000449	raver1	91	50.068	ENSOCUG00000020918	RAVER1	98	50.205	Oryctolagus_cuniculus
ENSHCOG00000000449	raver1	98	73.569	ENSORLG00000005458	raver1	100	72.207	Oryzias_latipes
ENSHCOG00000000449	raver1	98	73.706	ENSORLG00020004392	raver1	100	72.343	Oryzias_latipes_hni
ENSHCOG00000000449	raver1	98	73.978	ENSORLG00015017222	raver1	100	72.616	Oryzias_latipes_hsok
ENSHCOG00000000449	raver1	93	94.118	ENSOMEG00000023956	raver1	100	94.118	Oryzias_melastigma
ENSHCOG00000000449	raver1	91	50.405	ENSOGAG00000011071	RAVER1	96	50.609	Otolemur_garnettii
ENSHCOG00000000449	raver1	61	82.000	ENSOARG00000015886	RAVER1	96	48.529	Ovis_aries
ENSHCOG00000000449	raver1	91	50.543	ENSPPAG00000002611	RAVER1	96	49.932	Pan_paniscus
ENSHCOG00000000449	raver1	55	64.390	ENSPPRG00000009912	RAVER1	96	50.000	Panthera_pardus
ENSHCOG00000000449	raver1	91	50.543	ENSPTRG00000010466	RAVER1	96	49.932	Pan_troglodytes
ENSHCOG00000000449	raver1	66	58.431	ENSPANG00000004122	RAVER1	96	49.731	Papio_anubis
ENSHCOG00000000449	raver1	90	53.968	ENSPCIG00000018695	-	97	53.723	Phascolarctos_cinereus
ENSHCOG00000000449	raver1	98	69.920	ENSPFOG00000007016	raver1	100	71.658	Poecilia_formosa
ENSHCOG00000000449	raver1	93	70.959	ENSPLAG00000020793	raver1	99	70.959	Poecilia_latipinna
ENSHCOG00000000449	raver1	98	73.171	ENSPMEG00000011220	raver1	100	72.087	Poecilia_mexicana
ENSHCOG00000000449	raver1	98	70.109	ENSPREG00000006864	raver1	100	69.074	Poecilia_reticulata
ENSHCOG00000000449	raver1	91	51.156	ENSPPYG00000010514	RAVER1	82	50.205	Pongo_abelii
ENSHCOG00000000449	raver1	79	58.268	ENSPCOG00000026605	RAVER1	77	61.728	Propithecus_coquereli
ENSHCOG00000000449	raver1	98	70.845	ENSPNYG00000013284	raver1	100	70.845	Pundamilia_nyererei
ENSHCOG00000000449	raver1	96	66.804	ENSPNAG00000015476	raver1	100	66.397	Pygocentrus_nattereri
ENSHCOG00000000449	raver1	89	50.205	ENSRNOG00000020710	Raver1	98	49.866	Rattus_norvegicus
ENSHCOG00000000449	raver1	91	52.743	ENSRBIG00000034702	RAVER1	96	52.039	Rhinopithecus_bieti
ENSHCOG00000000449	raver1	91	52.883	ENSRROG00000031186	RAVER1	96	52.254	Rhinopithecus_roxellana
ENSHCOG00000000449	raver1	91	52.514	ENSSBOG00000023423	RAVER1	96	52.321	Saimiri_boliviensis_boliviensis
ENSHCOG00000000449	raver1	83	53.893	ENSSHAG00000008181	-	90	53.478	Sarcophilus_harrisii
ENSHCOG00000000449	raver1	96	77.273	ENSSMAG00000004546	raver1	100	77.476	Scophthalmus_maximus
ENSHCOG00000000449	raver1	96	78.867	ENSSDUG00000021063	raver1	100	78.912	Seriola_dumerili
ENSHCOG00000000449	raver1	96	78.729	ENSSLDG00000014505	raver1	100	78.776	Seriola_lalandi_dorsalis
ENSHCOG00000000449	raver1	96	77.486	ENSSPAG00000000688	raver1	100	77.959	Stegastes_partitus
ENSHCOG00000000449	raver1	91	51.120	ENSSSCG00000013650	-	98	52.039	Sus_scrofa
ENSHCOG00000000449	raver1	96	73.306	ENSTRUG00000025641	raver1	100	72.169	Takifugu_rubripes
ENSHCOG00000000449	raver1	78	58.498	ENSUAMG00000020385	RAVER1	77	62.963	Ursus_americanus
ENSHCOG00000000449	raver1	91	51.821	ENSVVUG00000028976	RAVER1	96	51.972	Vulpes_vulpes
ENSHCOG00000000449	raver1	91	50.418	ENSXETG00000011622	raver1	98	48.883	Xenopus_tropicalis
ENSHCOG00000000449	raver1	98	73.171	ENSXCOG00000016368	raver1	100	71.854	Xiphophorus_couchianus
ENSHCOG00000000449	raver1	98	73.171	ENSXMAG00000000217	raver1	100	71.854	Xiphophorus_maculatus