EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000471 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3555 bases
Position: chrKV879811.1:324-3878
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013551	RVT_1	PF00078.27	5.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020934	-	3555	-	ENSHCOP00000013551	1184 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000000471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000471	-	83	52.480	ENSHCOG00000007389	-	93	52.480
ENSHCOG00000000471	-	83	70.000	ENSHCOG00000007436	-	96	70.000
ENSHCOG00000000471	-	91	48.435	ENSHCOG00000007397	-	93	48.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000471	-	73	38.990	ENSACIG00000010787	-	86	38.990	Amphilophus_citrinellus
ENSHCOG00000000471	-	76	38.594	ENSACIG00000007038	-	90	34.495	Amphilophus_citrinellus
ENSHCOG00000000471	-	69	38.655	ENSACIG00000009025	-	93	38.655	Amphilophus_citrinellus
ENSHCOG00000000471	-	68	38.348	ENSACIG00000013116	-	80	38.300	Amphilophus_citrinellus
ENSHCOG00000000471	-	80	33.663	ENSACIG00000012161	-	86	33.663	Amphilophus_citrinellus
ENSHCOG00000000471	-	91	39.964	ENSAMXG00000042811	-	92	39.964	Astyanax_mexicanus
ENSHCOG00000000471	-	92	36.629	ENSCPBG00000003842	-	86	36.629	Chrysemys_picta_bellii
ENSHCOG00000000471	-	91	33.180	ENSCVAG00000004138	-	98	33.180	Cyprinodon_variegatus
ENSHCOG00000000471	-	84	36.449	ENSELUG00000004618	-	87	36.503	Esox_lucius
ENSHCOG00000000471	-	68	39.829	ENSELUG00000004597	-	84	39.856	Esox_lucius
ENSHCOG00000000471	-	62	38.904	ENSFHEG00000007211	-	74	37.927	Fundulus_heteroclitus
ENSHCOG00000000471	-	77	36.919	ENSFHEG00000002853	-	85	36.919	Fundulus_heteroclitus
ENSHCOG00000000471	-	76	38.177	ENSFHEG00000022106	-	85	38.177	Fundulus_heteroclitus
ENSHCOG00000000471	-	77	33.333	ENSFHEG00000002865	-	79	33.333	Fundulus_heteroclitus
ENSHCOG00000000471	-	60	37.500	ENSLBEG00000006732	-	81	37.500	Labrus_bergylta
ENSHCOG00000000471	-	57	37.972	ENSLBEG00000004576	-	81	37.972	Labrus_bergylta
ENSHCOG00000000471	-	67	36.510	ENSLBEG00000003745	-	91	36.510	Labrus_bergylta
ENSHCOG00000000471	-	66	35.544	ENSLACG00000006357	-	98	35.544	Latimeria_chalumnae
ENSHCOG00000000471	-	90	36.685	ENSLOCG00000017064	-	98	36.685	Lepisosteus_oculatus
ENSHCOG00000000471	-	90	35.256	ENSLOCG00000011928	-	99	35.256	Lepisosteus_oculatus
ENSHCOG00000000471	-	88	36.116	ENSMAMG00000019985	-	89	36.210	Mastacembelus_armatus
ENSHCOG00000000471	-	68	40.123	ENSONIG00000020875	-	70	40.123	Oreochromis_niloticus
ENSHCOG00000000471	-	68	35.165	ENSOMEG00000015368	-	87	35.043	Oryzias_melastigma
ENSHCOG00000000471	-	71	34.483	ENSPMGG00000017392	-	89	34.483	Periophthalmus_magnuspinnatus
ENSHCOG00000000471	-	52	37.258	ENSPMGG00000001593	-	63	37.258	Periophthalmus_magnuspinnatus
ENSHCOG00000000471	-	69	37.653	ENSPLAG00000022994	-	77	37.653	Poecilia_latipinna
ENSHCOG00000000471	-	69	37.424	ENSPLAG00000011810	-	77	37.424	Poecilia_latipinna
ENSHCOG00000000471	-	68	37.189	ENSPLAG00000023379	-	96	37.189	Poecilia_latipinna
ENSHCOG00000000471	-	73	38.028	ENSPLAG00000011817	-	87	36.712	Poecilia_latipinna
ENSHCOG00000000471	-	79	36.483	ENSPMEG00000003431	-	90	36.962	Poecilia_mexicana
ENSHCOG00000000471	-	68	34.572	ENSPMEG00000008574	-	74	34.572	Poecilia_mexicana
ENSHCOG00000000471	-	95	31.838	ENSPREG00000005456	-	92	31.838	Poecilia_reticulata
ENSHCOG00000000471	-	76	37.607	ENSPREG00000012484	-	82	37.500	Poecilia_reticulata
ENSHCOG00000000471	-	95	31.634	ENSPREG00000005756	-	98	31.634	Poecilia_reticulata
ENSHCOG00000000471	-	91	35.000	ENSPNAG00000016635	-	90	35.000	Pygocentrus_nattereri
ENSHCOG00000000471	-	91	35.409	ENSPNAG00000003539	-	90	35.409	Pygocentrus_nattereri
ENSHCOG00000000471	-	91	34.775	ENSPNAG00000007038	-	91	34.775	Pygocentrus_nattereri
ENSHCOG00000000471	-	63	39.242	ENSPNAG00000017596	-	80	39.242	Pygocentrus_nattereri
ENSHCOG00000000471	-	91	36.146	ENSPNAG00000021754	-	91	36.146	Pygocentrus_nattereri
ENSHCOG00000000471	-	84	34.609	ENSPNAG00000014625	-	88	34.609	Pygocentrus_nattereri
ENSHCOG00000000471	-	91	37.569	ENSXCOG00000013093	-	93	37.569	Xiphophorus_couchianus
ENSHCOG00000000471	-	68	37.748	ENSXCOG00000008881	-	90	37.748	Xiphophorus_couchianus
ENSHCOG00000000471	-	82	35.835	ENSXMAG00000028672	-	90	35.835	Xiphophorus_maculatus