EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000478 (Gene tree)
Gene ID: 109522120
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2160 bases
Position: chrKV880150.1:7085860-7088019
Accession: 109522120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014054	Ribosomal_L29e	PF01779.17	4.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021570	-	237	XM_019880417	ENSHCOP00000014054	78 (aa)	XP_019735976	UPI00094E051D

Gene Model

Click here to download ENSHCOG00000000478's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000478	rpl29	59	95.652	ENSG00000162244	RPL29	97	88.889	Homo_sapiens
ENSHCOG00000000478	rpl29	69	90.741	ENSAPOG00000002586	rpl29	78	94.000	Acanthochromis_polyacanthus
ENSHCOG00000000478	rpl29	81	96.825	ENSACIG00000018340	rpl29	98	96.825	Amphilophus_citrinellus
ENSHCOG00000000478	rpl29	69	94.444	ENSAOCG00000016652	rpl29	78	98.000	Amphiprion_ocellaris
ENSHCOG00000000478	rpl29	69	94.444	ENSAPEG00000005754	rpl29	78	98.000	Amphiprion_percula
ENSHCOG00000000478	rpl29	59	95.652	ENSACAG00000006888	RPL29	77	96.000	Anolis_carolinensis
ENSHCOG00000000478	rpl29	59	95.652	ENSANAG00000024147	-	77	78.261	Aotus_nancymaae
ENSHCOG00000000478	rpl29	78	96.721	ENSACLG00000017820	rpl29	95	96.721	Astatotilapia_calliptera
ENSHCOG00000000478	rpl29	82	87.692	ENSAMXG00000038794	rpl29	78	96.000	Astyanax_mexicanus
ENSHCOG00000000478	rpl29	69	62.963	WBGene00004443	rpl-29	81	66.000	Caenorhabditis_elegans
ENSHCOG00000000478	rpl29	59	95.652	ENSCJAG00000042339	-	77	78.261	Callithrix_jacchus
ENSHCOG00000000478	rpl29	59	95.652	ENSCCAG00000027980	-	58	94.286	Cebus_capucinus
ENSHCOG00000000478	rpl29	67	76.923	ENSCING00000018496	-	86	78.000	Ciona_intestinalis
ENSHCOG00000000478	rpl29	67	80.769	ENSCSAVG00000005231	-	85	82.000	Ciona_savignyi
ENSHCOG00000000478	rpl29	71	96.364	ENSCGRG00001016452	-	81	96.364	Cricetulus_griseus_chok1gshd
ENSHCOG00000000478	rpl29	64	96.000	ENSCSEG00000010267	rpl29	76	96.000	Cynoglossus_semilaevis
ENSHCOG00000000478	rpl29	79	96.774	ENSCVAG00000023098	rpl29	97	96.774	Cyprinodon_variegatus
ENSHCOG00000000478	rpl29	79	88.889	ENSDARG00000077717	rpl29	78	96.000	Danio_rerio
ENSHCOG00000000478	rpl29	64	66.000	FBgn0016726	RpL29	66	66.000	Drosophila_melanogaster
ENSHCOG00000000478	rpl29	55	86.047	ENSEASG00005005507	-	66	86.047	Equus_asinus_asinus
ENSHCOG00000000478	rpl29	82	82.812	ENSELUG00000015592	RL29	71	90.000	Esox_lucius
ENSHCOG00000000478	rpl29	96	48.684	ENSFCAG00000035470	-	58	65.909	Felis_catus
ENSHCOG00000000478	rpl29	87	60.294	ENSFCAG00000043006	-	62	70.000	Felis_catus
ENSHCOG00000000478	rpl29	59	93.478	ENSFALG00000008925	RPL29	74	94.000	Ficedula_albicollis
ENSHCOG00000000478	rpl29	79	93.548	ENSFHEG00000015425	rpl29	78	96.000	Fundulus_heteroclitus
ENSHCOG00000000478	rpl29	69	88.889	ENSGMOG00000003626	rpl29	66	88.000	Gadus_morhua
ENSHCOG00000000478	rpl29	59	97.826	ENSGALG00000026978	RPL29	70	98.000	Gallus_gallus
ENSHCOG00000000478	rpl29	79	95.161	ENSGAFG00000012868	rpl29	78	96.000	Gambusia_affinis
ENSHCOG00000000478	rpl29	90	84.507	ENSGACG00000007041	rpl29	65	94.000	Gasterosteus_aculeatus
ENSHCOG00000000478	rpl29	59	75.000	ENSGAGG00000024203	-	89	75.000	Gopherus_agassizii
ENSHCOG00000000478	rpl29	59	95.652	ENSGGOG00000024691	RPL29	62	89.189	Gorilla_gorilla
ENSHCOG00000000478	rpl29	78	96.721	ENSHBUG00000010519	rpl29	95	96.721	Haplochromis_burtoni
ENSHCOG00000000478	rpl29	81	88.889	ENSIPUG00000001196	rpl29	78	98.000	Ictalurus_punctatus
ENSHCOG00000000478	rpl29	69	96.296	ENSKMAG00000011291	rpl29	78	96.000	Kryptolebias_marmoratus
ENSHCOG00000000478	rpl29	69	92.593	ENSLBEG00000016213	rpl29	74	94.000	Labrus_bergylta
ENSHCOG00000000478	rpl29	78	86.885	ENSLACG00000018622	rpl29	78	90.000	Latimeria_chalumnae
ENSHCOG00000000478	rpl29	74	87.931	ENSLACG00000018031	-	74	90.000	Latimeria_chalumnae
ENSHCOG00000000478	rpl29	59	93.478	ENSLOCG00000013798	rpl29	77	94.000	Lepisosteus_oculatus
ENSHCOG00000000478	rpl29	69	96.296	ENSMAMG00000014274	rpl29	53	98.000	Mastacembelus_armatus
ENSHCOG00000000478	rpl29	78	96.721	ENSMZEG00005013519	rpl29	95	96.721	Maylandia_zebra
ENSHCOG00000000478	rpl29	59	97.826	ENSMGAG00000001213	RPL29	70	98.000	Meleagris_gallopavo
ENSHCOG00000000478	rpl29	63	81.633	ENSMICG00000049466	-	74	81.633	Microcebus_murinus
ENSHCOG00000000478	rpl29	78	96.721	ENSMMOG00000010430	rpl29	95	96.721	Mola_mola
ENSHCOG00000000478	rpl29	69	96.296	ENSMALG00000009023	rpl29	64	98.000	Monopterus_albus
ENSHCOG00000000478	rpl29	71	96.364	ENSMUSG00000048758	Rpl29	81	96.364	Mus_musculus
ENSHCOG00000000478	rpl29	78	96.721	ENSNBRG00000022109	rpl29	95	96.721	Neolamprologus_brichardi
ENSHCOG00000000478	rpl29	78	96.721	ENSONIG00000014377	rpl29	97	96.721	Oreochromis_niloticus
ENSHCOG00000000478	rpl29	78	96.721	ENSORLG00000023610	rpl29	64	96.721	Oryzias_latipes
ENSHCOG00000000478	rpl29	78	96.721	ENSORLG00020018665	rpl29	64	96.721	Oryzias_latipes_hni
ENSHCOG00000000478	rpl29	78	96.721	ENSORLG00015014455	rpl29	64	96.721	Oryzias_latipes_hsok
ENSHCOG00000000478	rpl29	78	98.361	ENSOMEG00000019919	rpl29	95	98.361	Oryzias_melastigma
ENSHCOG00000000478	rpl29	87	61.765	ENSPPRG00000011689	-	75	73.469	Panthera_pardus
ENSHCOG00000000478	rpl29	67	71.154	ENSPTIG00000011913	-	61	70.000	Panthera_tigris_altaica
ENSHCOG00000000478	rpl29	59	95.652	ENSPTRG00000043237	RPL29	63	89.189	Pan_troglodytes
ENSHCOG00000000478	rpl29	59	97.826	ENSPKIG00000025048	rpl29	76	98.000	Paramormyrops_kingsleyae
ENSHCOG00000000478	rpl29	59	95.652	ENSPSIG00000014699	RPL29	79	96.000	Pelodiscus_sinensis
ENSHCOG00000000478	rpl29	100	75.641	ENSPMGG00000005361	rpl29	74	92.000	Periophthalmus_magnuspinnatus
ENSHCOG00000000478	rpl29	78	96.721	ENSPFOG00000011385	rpl29	100	96.721	Poecilia_formosa
ENSHCOG00000000478	rpl29	64	94.000	ENSPLAG00000012042	rpl29	78	94.000	Poecilia_latipinna
ENSHCOG00000000478	rpl29	79	96.774	ENSPMEG00000018297	rpl29	97	96.774	Poecilia_mexicana
ENSHCOG00000000478	rpl29	79	96.774	ENSPREG00000007066	rpl29	97	96.774	Poecilia_reticulata
ENSHCOG00000000478	rpl29	78	96.721	ENSPNYG00000019481	rpl29	95	96.721	Pundamilia_nyererei
ENSHCOG00000000478	rpl29	81	87.302	ENSPNAG00000007550	rpl29	78	96.000	Pygocentrus_nattereri
ENSHCOG00000000478	rpl29	67	86.538	ENSRNOG00000025794	AABR07021239.1	67	86.000	Rattus_norvegicus
ENSHCOG00000000478	rpl29	59	76.087	YFR032C-A	RPL29	78	76.087	Saccharomyces_cerevisiae
ENSHCOG00000000478	rpl29	69	94.444	ENSSMAG00000013571	rpl29	78	98.000	Scophthalmus_maximus
ENSHCOG00000000478	rpl29	64	96.000	ENSSDUG00000016140	rpl29	78	96.000	Seriola_dumerili
ENSHCOG00000000478	rpl29	59	68.085	ENSSDUG00000020458	-	76	68.085	Seriola_dumerili
ENSHCOG00000000478	rpl29	64	96.000	ENSSLDG00000003932	rpl29	78	96.000	Seriola_lalandi_dorsalis
ENSHCOG00000000478	rpl29	59	97.826	ENSSPUG00000003760	RPL29	79	98.000	Sphenodon_punctatus
ENSHCOG00000000478	rpl29	69	88.889	ENSSPAG00000020292	rpl29	78	90.000	Stegastes_partitus
ENSHCOG00000000478	rpl29	50	89.744	ENSSSCG00000037047	-	86	90.476	Sus_scrofa
ENSHCOG00000000478	rpl29	69	68.519	ENSSSCG00000031314	-	75	68.750	Sus_scrofa
ENSHCOG00000000478	rpl29	59	93.478	ENSTGUG00000006027	RPL29	79	94.000	Taeniopygia_guttata
ENSHCOG00000000478	rpl29	79	88.710	ENSTRUG00000022273	rpl29	77	90.000	Takifugu_rubripes
ENSHCOG00000000478	rpl29	68	96.226	ENSTNIG00000014816	rpl29	74	96.000	Tetraodon_nigroviridis
ENSHCOG00000000478	rpl29	79	74.194	ENSTBEG00000000807	-	60	82.000	Tupaia_belangeri
ENSHCOG00000000478	rpl29	62	91.667	ENSUAMG00000002601	-	84	91.667	Ursus_americanus
ENSHCOG00000000478	rpl29	59	89.130	ENSVVUG00000012400	-	88	90.000	Vulpes_vulpes
ENSHCOG00000000478	rpl29	59	95.652	ENSXETG00000010811	rpl29	67	96.000	Xenopus_tropicalis
ENSHCOG00000000478	rpl29	78	95.082	ENSXCOG00000013543	rpl29	95	95.082	Xiphophorus_couchianus
ENSHCOG00000000478	rpl29	79	95.161	ENSXMAG00000020948	rpl29	78	96.000	Xiphophorus_maculatus