EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000536 (Gene tree)
Gene ID: 109532146
Gene Symbol: mrpl54
Alias: si:dkeyp-70f9.5
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 969 bases
Position: chrKV880451.1:3235239-3236207
Accession: 109532146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027819	Ribosomal_L37	PF08561.10	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000024407	-	429	XM_019896814	ENSHCOP00000027819	142 (aa)	XP_019752373	-

Gene Model

Click here to download ENSHCOG00000000536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000536	mrpl54	76	54.955	ENSG00000183617	MRPL54	64	59.091	Homo_sapiens
ENSHCOG00000000536	mrpl54	96	69.853	ENSAPOG00000022643	mrpl54	98	69.853	Acanthochromis_polyacanthus
ENSHCOG00000000536	mrpl54	77	56.250	ENSAMEG00000005908	MRPL54	64	60.227	Ailuropoda_melanoleuca
ENSHCOG00000000536	mrpl54	97	68.841	ENSACIG00000006438	mrpl54	99	68.841	Amphilophus_citrinellus
ENSHCOG00000000536	mrpl54	97	68.841	ENSAOCG00000006430	mrpl54	99	68.841	Amphiprion_ocellaris
ENSHCOG00000000536	mrpl54	97	68.841	ENSAPEG00000023406	mrpl54	99	68.841	Amphiprion_percula
ENSHCOG00000000536	mrpl54	80	72.566	ENSATEG00000004969	mrpl54	82	72.566	Anabas_testudineus
ENSHCOG00000000536	mrpl54	71	53.465	ENSACAG00000017747	-	82	53.409	Anolis_carolinensis
ENSHCOG00000000536	mrpl54	71	60.577	ENSANAG00000028692	MRPL54	64	59.091	Aotus_nancymaae
ENSHCOG00000000536	mrpl54	97	66.906	ENSACLG00000001877	mrpl54	99	66.906	Astatotilapia_calliptera
ENSHCOG00000000536	mrpl54	58	68.293	ENSAMXG00000018143	mrpl54	62	65.909	Astyanax_mexicanus
ENSHCOG00000000536	mrpl54	61	60.920	ENSBTAG00000008396	MRPL54	63	60.920	Bos_taurus
ENSHCOG00000000536	mrpl54	54	41.250	WBGene00009128	mrpl-54	59	41.250	Caenorhabditis_elegans
ENSHCOG00000000536	mrpl54	71	59.615	ENSCJAG00000014998	MRPL54	64	57.955	Callithrix_jacchus
ENSHCOG00000000536	mrpl54	72	53.333	ENSCAFG00000019192	MRPL54	64	55.682	Canis_familiaris
ENSHCOG00000000536	mrpl54	72	53.333	ENSCAFG00020018333	MRPL54	64	55.682	Canis_lupus_dingo
ENSHCOG00000000536	mrpl54	61	60.920	ENSCHIG00000026538	MRPL54	63	60.920	Capra_hircus
ENSHCOG00000000536	mrpl54	67	55.789	ENSCAPG00000012166	MRPL54	89	60.000	Cavia_aperea
ENSHCOG00000000536	mrpl54	77	55.752	ENSCPOG00000031082	MRPL54	62	60.000	Cavia_porcellus
ENSHCOG00000000536	mrpl54	77	57.522	ENSCCAG00000000138	MRPL54	64	57.955	Cebus_capucinus
ENSHCOG00000000536	mrpl54	71	59.615	ENSCATG00000014066	MRPL54	62	62.353	Cercocebus_atys
ENSHCOG00000000536	mrpl54	77	54.545	ENSCLAG00000007908	MRPL54	65	59.091	Chinchilla_lanigera
ENSHCOG00000000536	mrpl54	71	59.615	ENSCSAG00000010950	MRPL54	62	62.353	Chlorocebus_sabaeus
ENSHCOG00000000536	mrpl54	99	47.857	ENSCPBG00000017103	MRPL54	79	47.857	Chrysemys_picta_bellii
ENSHCOG00000000536	mrpl54	82	34.746	ENSCING00000019896	-	56	38.750	Ciona_intestinalis
ENSHCOG00000000536	mrpl54	87	33.065	ENSCSAVG00000009604	-	61	37.500	Ciona_savignyi
ENSHCOG00000000536	mrpl54	71	57.692	ENSCANG00000027841	MRPL54	64	60.227	Colobus_angolensis_palliatus
ENSHCOG00000000536	mrpl54	71	60.577	ENSCGRG00001019482	Mrpl54	64	61.364	Cricetulus_griseus_chok1gshd
ENSHCOG00000000536	mrpl54	71	60.577	ENSCGRG00000010923	Mrpl54	64	61.364	Cricetulus_griseus_crigri
ENSHCOG00000000536	mrpl54	94	61.194	ENSCSEG00000019883	mrpl54	88	61.194	Cynoglossus_semilaevis
ENSHCOG00000000536	mrpl54	80	77.876	ENSCVAG00000002210	mrpl54	81	77.876	Cyprinodon_variegatus
ENSHCOG00000000536	mrpl54	72	70.588	ENSDARG00000071468	mrpl54	65	71.591	Danio_rerio
ENSHCOG00000000536	mrpl54	60	57.647	ENSDNOG00000007387	MRPL54	64	55.682	Dasypus_novemcinctus
ENSHCOG00000000536	mrpl54	62	59.091	ENSDORG00000005326	Mrpl54	66	59.091	Dipodomys_ordii
ENSHCOG00000000536	mrpl54	55	47.436	FBgn0034579	mRpL54	59	47.436	Drosophila_melanogaster
ENSHCOG00000000536	mrpl54	71	57.692	ENSETEG00000017500	MRPL54	66	57.955	Echinops_telfairi
ENSHCOG00000000536	mrpl54	66	50.000	ENSEBUG00000003179	mrpl54	75	50.575	Eptatretus_burgeri
ENSHCOG00000000536	mrpl54	61	59.770	ENSEASG00005022283	MRPL54	64	59.770	Equus_asinus_asinus
ENSHCOG00000000536	mrpl54	61	59.770	ENSECAG00000001515	MRPL54	64	59.770	Equus_caballus
ENSHCOG00000000536	mrpl54	96	56.618	ENSELUG00000022358	mrpl54	98	56.618	Esox_lucius
ENSHCOG00000000536	mrpl54	72	58.095	ENSFCAG00000007144	MRPL54	64	61.364	Felis_catus
ENSHCOG00000000536	mrpl54	68	54.639	ENSFALG00000011660	MRPL54	80	54.651	Ficedula_albicollis
ENSHCOG00000000536	mrpl54	71	56.731	ENSFDAG00000020803	MRPL54	64	59.091	Fukomys_damarensis
ENSHCOG00000000536	mrpl54	82	52.137	ENSGALG00000027611	MRPL54	99	51.667	Gallus_gallus
ENSHCOG00000000536	mrpl54	89	70.866	ENSGAFG00000016193	mrpl54	91	70.866	Gambusia_affinis
ENSHCOG00000000536	mrpl54	68	57.732	ENSGAGG00000020238	MRPL54	68	59.302	Gopherus_agassizii
ENSHCOG00000000536	mrpl54	76	55.856	ENSGGOG00000014722	MRPL54	64	60.227	Gorilla_gorilla
ENSHCOG00000000536	mrpl54	87	73.171	ENSHBUG00000009028	mrpl54	72	73.171	Haplochromis_burtoni
ENSHCOG00000000536	mrpl54	71	57.426	ENSHGLG00000006157	MRPL54	66	57.955	Heterocephalus_glaber_female
ENSHCOG00000000536	mrpl54	71	57.426	ENSHGLG00100000788	MRPL54	66	57.955	Heterocephalus_glaber_male
ENSHCOG00000000536	mrpl54	62	70.455	ENSIPUG00000024854	mrpl54	73	72.549	Ictalurus_punctatus
ENSHCOG00000000536	mrpl54	68	58.333	ENSSTOG00000022378	MRPL54	90	60.227	Ictidomys_tridecemlineatus
ENSHCOG00000000536	mrpl54	72	59.048	ENSJJAG00000020405	Mrpl54	63	62.069	Jaculus_jaculus
ENSHCOG00000000536	mrpl54	89	67.188	ENSKMAG00000022310	mrpl54	91	63.281	Kryptolebias_marmoratus
ENSHCOG00000000536	mrpl54	95	68.889	ENSLBEG00000005935	mrpl54	97	68.889	Labrus_bergylta
ENSHCOG00000000536	mrpl54	71	64.356	ENSLACG00000013912	MRPL54	66	63.636	Latimeria_chalumnae
ENSHCOG00000000536	mrpl54	81	58.261	ENSLOCG00000003860	mrpl54	100	50.725	Lepisosteus_oculatus
ENSHCOG00000000536	mrpl54	63	59.551	ENSLAFG00000029657	MRPL54	63	60.227	Loxodonta_africana
ENSHCOG00000000536	mrpl54	71	59.615	ENSMFAG00000003311	MRPL54	62	62.353	Macaca_fascicularis
ENSHCOG00000000536	mrpl54	71	59.615	ENSMMUG00000044080	MRPL54	62	62.353	Macaca_mulatta
ENSHCOG00000000536	mrpl54	71	59.615	ENSMNEG00000039499	MRPL54	62	62.353	Macaca_nemestrina
ENSHCOG00000000536	mrpl54	96	67.647	ENSMAMG00000003291	mrpl54	98	67.647	Mastacembelus_armatus
ENSHCOG00000000536	mrpl54	87	73.171	ENSMZEG00005009023	mrpl54	72	73.171	Maylandia_zebra
ENSHCOG00000000536	mrpl54	68	53.125	ENSMGAG00000000951	MRPL54	89	55.814	Meleagris_gallopavo
ENSHCOG00000000536	mrpl54	71	62.376	ENSMAUG00000009543	Mrpl54	65	64.773	Mesocricetus_auratus
ENSHCOG00000000536	mrpl54	60	60.000	ENSMICG00000034581	MRPL54	54	60.000	Microcebus_murinus
ENSHCOG00000000536	mrpl54	71	62.500	ENSMOCG00000017895	Mrpl54	64	62.500	Microtus_ochrogaster
ENSHCOG00000000536	mrpl54	92	67.176	ENSMMOG00000020370	mrpl54	94	67.176	Mola_mola
ENSHCOG00000000536	mrpl54	72	54.369	ENSMODG00000000602	MRPL54	63	55.294	Monodelphis_domestica
ENSHCOG00000000536	mrpl54	80	75.221	ENSMALG00000020280	mrpl54	94	67.424	Monopterus_albus
ENSHCOG00000000536	mrpl54	71	59.406	MGP_CAROLIEiJ_G0015629	Mrpl54	65	60.227	Mus_caroli
ENSHCOG00000000536	mrpl54	60	61.176	ENSMUSG00000034932	Mrpl54	65	59.091	Mus_musculus
ENSHCOG00000000536	mrpl54	71	57.426	MGP_PahariEiJ_G0031042	Mrpl54	65	57.955	Mus_pahari
ENSHCOG00000000536	mrpl54	71	59.406	MGP_SPRETEiJ_G0016447	Mrpl54	65	60.227	Mus_spretus
ENSHCOG00000000536	mrpl54	58	63.855	ENSMLUG00000010801	MRPL54	83	61.364	Myotis_lucifugus
ENSHCOG00000000536	mrpl54	62	54.545	ENSNGAG00000021044	Mrpl54	63	54.545	Nannospalax_galili
ENSHCOG00000000536	mrpl54	80	77.876	ENSNBRG00000000568	mrpl54	82	77.876	Neolamprologus_brichardi
ENSHCOG00000000536	mrpl54	71	56.436	ENSMEUG00000013033	MRPL54	64	59.524	Notamacropus_eugenii
ENSHCOG00000000536	mrpl54	82	52.586	ENSOPRG00000010035	-	65	56.322	Ochotona_princeps
ENSHCOG00000000536	mrpl54	71	54.808	ENSODEG00000013969	MRPL54	64	56.818	Octodon_degus
ENSHCOG00000000536	mrpl54	93	68.939	ENSONIG00000002312	mrpl54	82	68.939	Oreochromis_niloticus
ENSHCOG00000000536	mrpl54	68	79.167	ENSORLG00000016960	mrpl54	71	78.409	Oryzias_latipes
ENSHCOG00000000536	mrpl54	70	78.000	ENSORLG00020014934	mrpl54	85	79.545	Oryzias_latipes_hni
ENSHCOG00000000536	mrpl54	98	60.432	ENSORLG00015010788	mrpl54	100	59.712	Oryzias_latipes_hsok
ENSHCOG00000000536	mrpl54	97	65.942	ENSOMEG00000009005	mrpl54	99	65.942	Oryzias_melastigma
ENSHCOG00000000536	mrpl54	62	63.636	ENSOGAG00000033519	-	64	63.636	Otolemur_garnettii
ENSHCOG00000000536	mrpl54	61	63.218	ENSOGAG00000026254	-	64	63.218	Otolemur_garnettii
ENSHCOG00000000536	mrpl54	76	54.955	ENSPPAG00000042418	MRPL54	64	59.091	Pan_paniscus
ENSHCOG00000000536	mrpl54	72	59.223	ENSPPRG00000012325	MRPL54	66	62.500	Panthera_pardus
ENSHCOG00000000536	mrpl54	62	62.500	ENSPTIG00000017727	MRPL54	62	62.500	Panthera_tigris_altaica
ENSHCOG00000000536	mrpl54	76	54.955	ENSPTRG00000010276	MRPL54	64	59.091	Pan_troglodytes
ENSHCOG00000000536	mrpl54	71	59.615	ENSPANG00000033944	MRPL54	62	62.353	Papio_anubis
ENSHCOG00000000536	mrpl54	75	67.593	ENSPKIG00000009984	mrpl54	63	62.963	Paramormyrops_kingsleyae
ENSHCOG00000000536	mrpl54	67	53.684	ENSPSIG00000013587	MRPL54	93	53.409	Pelodiscus_sinensis
ENSHCOG00000000536	mrpl54	96	64.964	ENSPMGG00000015972	mrpl54	89	64.964	Periophthalmus_magnuspinnatus
ENSHCOG00000000536	mrpl54	71	59.615	ENSPEMG00000022929	Mrpl54	64	60.227	Peromyscus_maniculatus_bairdii
ENSHCOG00000000536	mrpl54	70	54.000	ENSPCIG00000025383	MRPL54	61	56.627	Phascolarctos_cinereus
ENSHCOG00000000536	mrpl54	89	70.866	ENSPFOG00000007409	mrpl54	91	70.866	Poecilia_formosa
ENSHCOG00000000536	mrpl54	92	70.229	ENSPLAG00000001640	mrpl54	94	70.229	Poecilia_latipinna
ENSHCOG00000000536	mrpl54	89	70.866	ENSPLAG00000001633	mrpl54	91	70.866	Poecilia_latipinna
ENSHCOG00000000536	mrpl54	89	70.866	ENSPMEG00000021068	mrpl54	91	70.866	Poecilia_mexicana
ENSHCOG00000000536	mrpl54	89	70.866	ENSPMEG00000021078	mrpl54	91	70.866	Poecilia_mexicana
ENSHCOG00000000536	mrpl54	89	70.079	ENSPREG00000012425	mrpl54	94	67.939	Poecilia_reticulata
ENSHCOG00000000536	mrpl54	75	56.364	ENSPPYG00000009386	MRPL54	64	60.227	Pongo_abelii
ENSHCOG00000000536	mrpl54	78	53.509	ENSPCAG00000000690	MRPL54	62	58.824	Procavia_capensis
ENSHCOG00000000536	mrpl54	62	62.500	ENSPCOG00000027550	MRPL54	64	62.500	Propithecus_coquereli
ENSHCOG00000000536	mrpl54	87	72.358	ENSPNYG00000022006	mrpl54	72	72.358	Pundamilia_nyererei
ENSHCOG00000000536	mrpl54	72	67.647	ENSPNAG00000000077	mrpl54	73	67.647	Pygocentrus_nattereri
ENSHCOG00000000536	mrpl54	71	56.436	ENSRNOG00000020464	Mrpl54	65	56.818	Rattus_norvegicus
ENSHCOG00000000536	mrpl54	71	57.692	ENSRBIG00000027038	MRPL54	65	60.227	Rhinopithecus_bieti
ENSHCOG00000000536	mrpl54	71	57.692	ENSRROG00000018776	MRPL54	65	60.227	Rhinopithecus_roxellana
ENSHCOG00000000536	mrpl54	71	60.577	ENSSBOG00000028081	MRPL54	64	57.955	Saimiri_boliviensis_boliviensis
ENSHCOG00000000536	mrpl54	60	60.000	ENSSHAG00000002557	MRPL54	63	60.000	Sarcophilus_harrisii
ENSHCOG00000000536	mrpl54	63	69.663	ENSSFOG00015008073	mrpl54	90	54.478	Scleropages_formosus
ENSHCOG00000000536	mrpl54	92	70.992	ENSSMAG00000009226	mrpl54	94	70.992	Scophthalmus_maximus
ENSHCOG00000000536	mrpl54	93	71.970	ENSSDUG00000009545	mrpl54	94	70.455	Seriola_dumerili
ENSHCOG00000000536	mrpl54	93	74.242	ENSSLDG00000001781	mrpl54	94	72.727	Seriola_lalandi_dorsalis
ENSHCOG00000000536	mrpl54	68	55.670	ENSSPUG00000015361	MRPL54	67	56.818	Sphenodon_punctatus
ENSHCOG00000000536	mrpl54	90	65.625	ENSSPAG00000003775	-	94	64.122	Stegastes_partitus
ENSHCOG00000000536	mrpl54	90	65.625	ENSSPAG00000015601	mrpl54	94	64.122	Stegastes_partitus
ENSHCOG00000000536	mrpl54	63	59.551	ENSSSCG00000024242	MRPL54	64	60.227	Sus_scrofa
ENSHCOG00000000536	mrpl54	95	63.971	ENSTRUG00000004609	mrpl54	99	63.971	Takifugu_rubripes
ENSHCOG00000000536	mrpl54	76	77.778	ENSTNIG00000015468	mrpl54	94	68.702	Tetraodon_nigroviridis
ENSHCOG00000000536	mrpl54	71	58.416	ENSTTRG00000004410	MRPL54	65	61.364	Tursiops_truncatus
ENSHCOG00000000536	mrpl54	77	56.250	ENSUAMG00000021572	MRPL54	64	60.227	Ursus_americanus
ENSHCOG00000000536	mrpl54	77	57.143	ENSUMAG00000007416	MRPL54	64	60.227	Ursus_maritimus
ENSHCOG00000000536	mrpl54	72	53.333	ENSVVUG00000004420	MRPL54	64	55.682	Vulpes_vulpes
ENSHCOG00000000536	mrpl54	71	57.426	ENSXETG00000033250	MRPL54	65	57.471	Xenopus_tropicalis
ENSHCOG00000000536	mrpl54	89	70.079	ENSXMAG00000003500	mrpl54	94	67.939	Xiphophorus_maculatus