EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000539 (Gene tree)
Gene ID: 109525171
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 13165 bases
Position: chrKV879659.1:134350-147514
Accession: 109525171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027958	AF-4	PF05110.13	2e-215	1	3
ENSHCOP00000027958	AF-4	PF05110.13	2e-215	2	3
ENSHCOP00000027958	AF-4	PF05110.13	2e-215	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000024635	-	6796	XM_019885864	ENSHCOP00000027958	1035 (aa)	XP_019741423	UPI00094E9550

Gene Model

Click here to download ENSHCOG00000000539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000539	-	68	33.724	ENSG00000144218	AFF3	83	41.420	Homo_sapiens
ENSHCOG00000000539	-	99	47.970	ENSAPOG00000002994	-	100	48.646	Acanthochromis_polyacanthus
ENSHCOG00000000539	-	50	49.858	ENSACIG00000021066	-	94	43.810	Amphilophus_citrinellus
ENSHCOG00000000539	-	99	48.863	ENSAOCG00000020283	-	100	49.662	Amphiprion_ocellaris
ENSHCOG00000000539	-	99	48.904	ENSAPEG00000018794	-	100	49.620	Amphiprion_percula
ENSHCOG00000000539	-	99	48.305	ENSATEG00000015552	-	99	48.644	Anabas_testudineus
ENSHCOG00000000539	-	99	44.310	ENSACLG00000002905	-	99	44.857	Astatotilapia_calliptera
ENSHCOG00000000539	-	98	44.180	ENSCVAG00000015626	-	99	44.850	Cyprinodon_variegatus
ENSHCOG00000000539	-	99	37.333	ENSELUG00000019953	-	94	50.847	Esox_lucius
ENSHCOG00000000539	-	69	37.452	ENSFHEG00000003521	-	88	38.177	Fundulus_heteroclitus
ENSHCOG00000000539	-	70	33.425	ENSGALG00000016767	AFF3	50	40.167	Gallus_gallus
ENSHCOG00000000539	-	99	43.237	ENSGACG00000016333	-	100	49.721	Gasterosteus_aculeatus
ENSHCOG00000000539	-	99	44.166	ENSHBUG00000005828	-	100	44.646	Haplochromis_burtoni
ENSHCOG00000000539	-	54	50.794	ENSSTOG00000012140	AFF3	57	53.226	Ictidomys_tridecemlineatus
ENSHCOG00000000539	-	53	50.794	ENSJJAG00000013155	Aff3	61	53.226	Jaculus_jaculus
ENSHCOG00000000539	-	89	57.692	ENSKMAG00000013113	-	94	57.692	Kryptolebias_marmoratus
ENSHCOG00000000539	-	99	46.438	ENSLBEG00000016928	-	100	46.387	Labrus_bergylta
ENSHCOG00000000539	-	88	36.686	ENSLOCG00000004025	AFF1	99	34.366	Lepisosteus_oculatus
ENSHCOG00000000539	-	99	49.658	ENSMAMG00000016189	-	99	49.377	Mastacembelus_armatus
ENSHCOG00000000539	-	99	44.262	ENSMZEG00005020442	-	99	44.857	Maylandia_zebra
ENSHCOG00000000539	-	53	43.182	ENSMAUG00000010241	Aff1	50	63.934	Mesocricetus_auratus
ENSHCOG00000000539	-	55	36.275	ENSMODG00000013842	AFF4	58	41.221	Monodelphis_domestica
ENSHCOG00000000539	-	99	47.163	ENSMALG00000002436	-	99	47.163	Monopterus_albus
ENSHCOG00000000539	-	54	35.424	ENSMUSG00000037138	Aff3	52	53.226	Mus_musculus
ENSHCOG00000000539	-	68	34.706	ENSNGAG00000002408	Aff3	52	54.839	Nannospalax_galili
ENSHCOG00000000539	-	99	42.036	ENSONIG00000007636	-	100	41.824	Oreochromis_niloticus
ENSHCOG00000000539	-	70	72.857	ENSORLG00000006428	-	98	72.857	Oryzias_latipes
ENSHCOG00000000539	-	83	72.857	ENSORLG00020003991	-	98	72.857	Oryzias_latipes_hni
ENSHCOG00000000539	-	83	72.857	ENSORLG00015009287	-	98	72.857	Oryzias_latipes_hsok
ENSHCOG00000000539	-	87	59.048	ENSOMEG00000005799	-	100	59.048	Oryzias_melastigma
ENSHCOG00000000539	-	55	53.125	ENSPPRG00000014330	AFF3	50	52.381	Panthera_pardus
ENSHCOG00000000539	-	99	34.882	ENSPKIG00000007777	-	100	34.860	Paramormyrops_kingsleyae
ENSHCOG00000000539	-	59	64.516	ENSPSIG00000003759	AFF1	52	44.622	Pelodiscus_sinensis
ENSHCOG00000000539	-	54	47.619	ENSPEMG00000014802	Aff3	61	50.000	Peromyscus_maniculatus_bairdii
ENSHCOG00000000539	-	99	42.919	ENSPFOG00000004581	-	99	43.031	Poecilia_formosa
ENSHCOG00000000539	-	94	41.009	ENSPLAG00000012910	-	99	41.122	Poecilia_latipinna
ENSHCOG00000000539	-	99	48.226	ENSSMAG00000007062	-	99	48.354	Scophthalmus_maximus
ENSHCOG00000000539	-	56	45.557	ENSSDUG00000023775	-	95	47.234	Seriola_dumerili
ENSHCOG00000000539	-	99	48.225	ENSSLDG00000006836	-	99	49.793	Seriola_lalandi_dorsalis
ENSHCOG00000000539	-	96	48.300	ENSSPAG00000003972	-	97	49.302	Stegastes_partitus
ENSHCOG00000000539	-	99	43.061	ENSTRUG00000014005	-	99	43.834	Takifugu_rubripes
ENSHCOG00000000539	-	99	38.795	ENSTNIG00000007537	-	56	64.794	Tetraodon_nigroviridis
ENSHCOG00000000539	-	53	61.194	ENSVPAG00000004007	AFF1	51	61.194	Vicugna_pacos
ENSHCOG00000000539	-	99	40.838	ENSXMAG00000004657	-	99	41.667	Xiphophorus_maculatus