EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000542 (Gene tree)
Gene ID: 109511145
Gene Symbol: -
Alias: -
Full Name: G-patch domain and ankyrin repeats 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2496 bases
Position: chrKV880534.1:6223207-6225702
Accession: 109511145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000016582	G-patch	PF01585.23	5.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000028535	-	1756	XM_019861968	ENSHCOP00000016582	360 (aa)	XP_019717527	UPI00094E8931

Gene Model

Click here to download ENSHCOG00000000542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000542's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000542	-	99	34.783	ENSG00000204438	GPANK1	98	34.699	Homo_sapiens
ENSHCOG00000000542	-	100	50.134	ENSAPOG00000010685	-	99	48.525	Acanthochromis_polyacanthus
ENSHCOG00000000542	-	100	50.134	ENSAPOG00000014355	-	99	48.525	Acanthochromis_polyacanthus
ENSHCOG00000000542	-	68	40.856	ENSAMEG00000009290	GPANK1	87	34.174	Ailuropoda_melanoleuca
ENSHCOG00000000542	-	100	59.893	ENSAOCG00000024034	GPANK1	100	60.160	Amphiprion_ocellaris
ENSHCOG00000000542	-	100	59.211	ENSAPEG00000000530	GPANK1	100	60.163	Amphiprion_percula
ENSHCOG00000000542	-	99	58.592	ENSATEG00000008243	-	97	58.310	Anabas_testudineus
ENSHCOG00000000542	-	68	41.473	ENSANAG00000026356	GPANK1	91	37.069	Aotus_nancymaae
ENSHCOG00000000542	-	100	55.801	ENSACLG00000001320	GPANK1	99	56.044	Astatotilapia_calliptera
ENSHCOG00000000542	-	74	51.095	ENSAMXG00000012581	-	86	44.324	Astyanax_mexicanus
ENSHCOG00000000542	-	94	38.968	ENSBTAG00000008835	GPANK1	92	37.607	Bos_taurus
ENSHCOG00000000542	-	67	34.274	WBGene00014256	ZK1320.7	64	33.871	Caenorhabditis_elegans
ENSHCOG00000000542	-	68	40.856	ENSCJAG00000003002	GPANK1	92	36.522	Callithrix_jacchus
ENSHCOG00000000542	-	99	34.511	ENSCAFG00000000601	GPANK1	98	34.146	Canis_familiaris
ENSHCOG00000000542	-	99	34.511	ENSCAFG00020020706	GPANK1	98	34.146	Canis_lupus_dingo
ENSHCOG00000000542	-	68	41.569	ENSCHIG00000024637	GPANK1	92	35.143	Capra_hircus
ENSHCOG00000000542	-	56	45.327	ENSTSYG00000028288	GPANK1	92	34.770	Carlito_syrichta
ENSHCOG00000000542	-	99	34.153	ENSCAPG00000005661	GPANK1	93	33.062	Cavia_aperea
ENSHCOG00000000542	-	99	33.333	ENSCPOG00000031872	GPANK1	98	33.062	Cavia_porcellus
ENSHCOG00000000542	-	68	41.860	ENSCCAG00000019583	GPANK1	91	37.644	Cebus_capucinus
ENSHCOG00000000542	-	68	41.176	ENSCATG00000036761	GPANK1	98	33.607	Cercocebus_atys
ENSHCOG00000000542	-	93	36.994	ENSCLAG00000014639	GPANK1	91	35.465	Chinchilla_lanigera
ENSHCOG00000000542	-	68	41.176	ENSCSAG00000008570	GPANK1	98	33.880	Chlorocebus_sabaeus
ENSHCOG00000000542	-	69	44.269	ENSCPBG00000014706	GPANK1	73	42.292	Chrysemys_picta_bellii
ENSHCOG00000000542	-	92	36.842	ENSCANG00000038862	GPANK1	98	34.699	Colobus_angolensis_palliatus
ENSHCOG00000000542	-	68	39.764	ENSCGRG00001007828	Gpank1	95	32.615	Cricetulus_griseus_chok1gshd
ENSHCOG00000000542	-	68	39.764	ENSCGRG00000014676	Gpank1	98	32.615	Cricetulus_griseus_crigri
ENSHCOG00000000542	-	99	55.738	ENSCVAG00000020672	-	99	55.402	Cyprinodon_variegatus
ENSHCOG00000000542	-	69	52.734	ENSDARG00000053995	gpank1	97	43.923	Danio_rerio
ENSHCOG00000000542	-	80	39.934	ENSDNOG00000018727	GPANK1	98	35.753	Dasypus_novemcinctus
ENSHCOG00000000542	-	91	36.578	ENSDORG00000024662	Gpank1	89	34.971	Dipodomys_ordii
ENSHCOG00000000542	-	66	32.245	FBgn0034008	CG8152	71	32.245	Drosophila_melanogaster
ENSHCOG00000000542	-	91	36.982	ENSETEG00000015166	GPANK1	91	35.362	Echinops_telfairi
ENSHCOG00000000542	-	68	42.520	ENSEASG00005016313	GPANK1	98	34.584	Equus_asinus_asinus
ENSHCOG00000000542	-	99	36.141	ENSECAG00000019093	GPANK1	98	34.232	Equus_caballus
ENSHCOG00000000542	-	88	40.771	ENSELUG00000009653	-	93	40.260	Esox_lucius
ENSHCOG00000000542	-	99	36.631	ENSFCAG00000023899	GPANK1	98	34.865	Felis_catus
ENSHCOG00000000542	-	91	38.095	ENSFDAG00000018857	GPANK1	98	35.676	Fukomys_damarensis
ENSHCOG00000000542	-	99	54.444	ENSFHEG00000013343	-	99	54.167	Fundulus_heteroclitus
ENSHCOG00000000542	-	99	50.685	ENSGMOG00000007797	GPANK1	99	50.685	Gadus_morhua
ENSHCOG00000000542	-	99	54.821	ENSGAFG00000012817	-	99	54.098	Gambusia_affinis
ENSHCOG00000000542	-	100	58.127	ENSGACG00000016703	-	99	57.650	Gasterosteus_aculeatus
ENSHCOG00000000542	-	69	44.882	ENSGAGG00000011085	GPANK1	73	42.913	Gopherus_agassizii
ENSHCOG00000000542	-	99	35.946	ENSGGOG00000005539	GPANK1	98	34.973	Gorilla_gorilla
ENSHCOG00000000542	-	100	60.497	ENSHBUG00000018924	-	100	60.440	Haplochromis_burtoni
ENSHCOG00000000542	-	92	38.053	ENSHGLG00000011853	GPANK1	96	34.973	Heterocephalus_glaber_female
ENSHCOG00000000542	-	92	36.873	ENSHGLG00100018021	GPANK1	98	34.426	Heterocephalus_glaber_male
ENSHCOG00000000542	-	99	34.688	ENSSTOG00000024202	GPANK1	98	33.512	Ictidomys_tridecemlineatus
ENSHCOG00000000542	-	99	34.699	ENSJJAG00000015387	Gpank1	98	33.515	Jaculus_jaculus
ENSHCOG00000000542	-	100	53.333	ENSLBEG00000006075	-	91	52.688	Labrus_bergylta
ENSHCOG00000000542	-	99	48.663	ENSLBEG00000006109	-	98	46.791	Labrus_bergylta
ENSHCOG00000000542	-	89	52.336	ENSLBEG00000005751	GPANK1	100	52.336	Labrus_bergylta
ENSHCOG00000000542	-	81	38.644	ENSLACG00000008055	GPANK1	72	39.130	Latimeria_chalumnae
ENSHCOG00000000542	-	88	45.679	ENSLOCG00000008972	GPANK1	99	43.526	Lepisosteus_oculatus
ENSHCOG00000000542	-	56	42.991	ENSLAFG00000009499	GPANK1	84	33.529	Loxodonta_africana
ENSHCOG00000000542	-	68	41.406	ENSMFAG00000037562	GPANK1	98	34.426	Macaca_fascicularis
ENSHCOG00000000542	-	68	40.784	ENSMNEG00000040965	GPANK1	98	34.699	Macaca_nemestrina
ENSHCOG00000000542	-	68	41.176	ENSMLEG00000034247	GPANK1	98	33.607	Mandrillus_leucophaeus
ENSHCOG00000000542	-	100	59.517	ENSMAMG00000008470	-	100	59.517	Mastacembelus_armatus
ENSHCOG00000000542	-	100	61.050	ENSMZEG00005012135	GPANK1	100	61.264	Maylandia_zebra
ENSHCOG00000000542	-	91	36.095	ENSMAUG00000014293	Gpank1	98	32.514	Mesocricetus_auratus
ENSHCOG00000000542	-	81	37.542	ENSMICG00000037690	GPANK1	98	33.607	Microcebus_murinus
ENSHCOG00000000542	-	99	35.870	ENSMOCG00000000141	Gpank1	98	34.153	Microtus_ochrogaster
ENSHCOG00000000542	-	100	56.906	ENSMMOG00000003606	-	96	57.061	Mola_mola
ENSHCOG00000000542	-	71	38.403	ENSMODG00000015291	GPANK1	74	37.037	Monodelphis_domestica
ENSHCOG00000000542	-	78	67.845	ENSMALG00000002757	-	85	67.845	Monopterus_albus
ENSHCOG00000000542	-	91	37.574	MGP_CAROLIEiJ_G0021506	Gpank1	89	37.500	Mus_caroli
ENSHCOG00000000542	-	91	37.574	ENSMUSG00000092417	Gpank1	89	37.202	Mus_musculus
ENSHCOG00000000542	-	99	34.688	MGP_PahariEiJ_G0020501	Gpank1	98	35.054	Mus_pahari
ENSHCOG00000000542	-	91	37.278	MGP_SPRETEiJ_G0022411	Gpank1	89	36.905	Mus_spretus
ENSHCOG00000000542	-	99	33.060	ENSMPUG00000011149	GPANK1	98	34.417	Mustela_putorius_furo
ENSHCOG00000000542	-	99	36.486	ENSMLUG00000009408	GPANK1	91	35.054	Myotis_lucifugus
ENSHCOG00000000542	-	92	37.719	ENSNLEG00000006201	GPANK1	98	34.699	Nomascus_leucogenys
ENSHCOG00000000542	-	69	37.838	ENSMEUG00000004082	GPANK1	90	34.421	Notamacropus_eugenii
ENSHCOG00000000542	-	99	36.685	ENSOPRG00000012134	GPANK1	98	34.501	Ochotona_princeps
ENSHCOG00000000542	-	94	35.244	ENSODEG00000017947	GPANK1	93	35.613	Octodon_degus
ENSHCOG00000000542	-	80	39.262	ENSOCUG00000021491	GPANK1	92	35.530	Oryctolagus_cuniculus
ENSHCOG00000000542	-	100	56.131	ENSORLG00000009014	-	100	56.131	Oryzias_latipes
ENSHCOG00000000542	-	100	54.987	ENSORLG00020012082	-	100	55.978	Oryzias_latipes_hni
ENSHCOG00000000542	-	100	54.813	ENSORLG00015011561	-	100	54.595	Oryzias_latipes_hsok
ENSHCOG00000000542	-	68	43.191	ENSOGAG00000010276	GPANK1	98	36.119	Otolemur_garnettii
ENSHCOG00000000542	-	68	41.569	ENSOARG00000006913	GPANK1	89	35.143	Ovis_aries
ENSHCOG00000000542	-	99	35.054	ENSPPAG00000035166	GPANK1	98	36.314	Pan_paniscus
ENSHCOG00000000542	-	99	35.054	ENSPPRG00000001737	GPANK1	98	35.598	Panthera_pardus
ENSHCOG00000000542	-	99	35.054	ENSPTIG00000014920	GPANK1	98	35.326	Panthera_tigris_altaica
ENSHCOG00000000542	-	99	35.326	ENSPTRG00000017973	GPANK1	98	36.585	Pan_troglodytes
ENSHCOG00000000542	-	68	41.176	ENSPANG00000007625	GPANK1	98	33.607	Papio_anubis
ENSHCOG00000000542	-	69	52.941	ENSPKIG00000001197	GPANK1	77	52.941	Paramormyrops_kingsleyae
ENSHCOG00000000542	-	91	38.576	ENSPSIG00000006795	GPANK1	73	41.634	Pelodiscus_sinensis
ENSHCOG00000000542	-	100	49.863	ENSPMGG00000019843	-	100	49.315	Periophthalmus_magnuspinnatus
ENSHCOG00000000542	-	91	35.503	ENSPEMG00000014457	Gpank1	89	34.226	Peromyscus_maniculatus_bairdii
ENSHCOG00000000542	-	93	33.143	ENSPMAG00000010274	GPANK1	90	31.232	Petromyzon_marinus
ENSHCOG00000000542	-	99	33.784	ENSPCIG00000018505	GPANK1	72	38.583	Phascolarctos_cinereus
ENSHCOG00000000542	-	99	56.077	ENSPFOG00000009128	-	100	56.077	Poecilia_formosa
ENSHCOG00000000542	-	99	49.727	ENSPLAG00000007457	-	99	50.273	Poecilia_latipinna
ENSHCOG00000000542	-	99	56.077	ENSPMEG00000011187	-	100	56.077	Poecilia_mexicana
ENSHCOG00000000542	-	99	48.168	ENSPREG00000000043	-	99	47.480	Poecilia_reticulata
ENSHCOG00000000542	-	92	36.919	ENSPPYG00000016447	GPANK1	83	35.072	Pongo_abelii
ENSHCOG00000000542	-	57	36.321	ENSPCAG00000012850	GPANK1	74	34.686	Procavia_capensis
ENSHCOG00000000542	-	92	37.209	ENSPCOG00000017559	GPANK1	98	34.332	Propithecus_coquereli
ENSHCOG00000000542	-	100	61.326	ENSPNYG00000021711	GPANK1	100	61.264	Pundamilia_nyererei
ENSHCOG00000000542	-	68	42.745	ENSRNOG00000000848	Gpank1	71	41.107	Rattus_norvegicus
ENSHCOG00000000542	-	99	34.677	ENSRROG00000036770	GPANK1	98	35.946	Rhinopithecus_roxellana
ENSHCOG00000000542	-	68	41.473	ENSSBOG00000031598	GPANK1	91	36.812	Saimiri_boliviensis_boliviensis
ENSHCOG00000000542	-	99	43.526	ENSSFOG00015015696	gpank1	99	43.251	Scleropages_formosus
ENSHCOG00000000542	-	100	54.987	ENSSMAG00000021273	-	99	53.804	Scophthalmus_maximus
ENSHCOG00000000542	-	99	61.436	ENSSDUG00000016390	-	99	68.166	Seriola_dumerili
ENSHCOG00000000542	-	100	61.942	ENSSLDG00000022692	-	100	60.630	Seriola_lalandi_dorsalis
ENSHCOG00000000542	-	55	44.286	ENSSARG00000013203	GPANK1	69	39.516	Sorex_araneus
ENSHCOG00000000542	-	74	41.516	ENSSPUG00000017213	GPANK1	69	40.072	Sphenodon_punctatus
ENSHCOG00000000542	-	100	60.904	ENSSPAG00000023053	GPANK1	100	60.372	Stegastes_partitus
ENSHCOG00000000542	-	94	37.464	ENSSSCG00000001413	GPANK1	92	36.207	Sus_scrofa
ENSHCOG00000000542	-	100	52.632	ENSTRUG00000024606	-	100	52.632	Takifugu_rubripes
ENSHCOG00000000542	-	94	37.322	ENSTTRG00000014102	GPANK1	92	36.676	Tursiops_truncatus
ENSHCOG00000000542	-	68	40.551	ENSUAMG00000012437	GPANK1	98	33.967	Ursus_americanus
ENSHCOG00000000542	-	68	40.945	ENSUMAG00000014147	GPANK1	98	34.239	Ursus_maritimus
ENSHCOG00000000542	-	94	37.536	ENSVPAG00000002989	GPANK1	92	36.888	Vicugna_pacos
ENSHCOG00000000542	-	99	35.135	ENSVVUG00000020893	GPANK1	98	34.146	Vulpes_vulpes
ENSHCOG00000000542	-	100	34.959	ENSXETG00000002509	gpank1	71	40.081	Xenopus_tropicalis
ENSHCOG00000000542	-	99	48.626	ENSXCOG00000005699	-	95	48.352	Xiphophorus_couchianus
ENSHCOG00000000542	-	99	54.821	ENSXMAG00000026046	-	99	54.821	Xiphophorus_maculatus