EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000000585 (Gene tree)
Gene ID: 109528550
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC109528550
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 20866 bases
Position: chrKV880338.1:6777599-6798464
Accession: 109528550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015159	AXH	PF08517.12	1.8e-35	1	1
ENSHCOP00000027146	AXH	PF08517.12	1.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027963	-	2658	XM_019891318	ENSHCOP00000015159	649 (aa)	XP_019746877	UPI00094E94FA
ENSHCOT00000022999	-	3043	XM_019891319	ENSHCOP00000027146	649 (aa)	XP_019746878	UPI00094E94FA

Gene Model

Click here to download ENSHCOG00000000585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000585	-	100	67.971	ENSAPOG00000010154	-	100	67.733	Acanthochromis_polyacanthus
ENSHCOG00000000585	-	100	67.971	ENSAOCG00000006788	-	100	67.587	Amphiprion_ocellaris
ENSHCOG00000000585	-	100	67.681	ENSAPEG00000013961	-	100	67.297	Amphiprion_percula
ENSHCOG00000000585	-	100	65.130	ENSATEG00000015767	-	100	64.884	Anabas_testudineus
ENSHCOG00000000585	-	100	44.760	ENSAMXG00000002724	-	100	44.709	Astyanax_mexicanus
ENSHCOG00000000585	-	100	59.184	ENSCSEG00000020655	-	100	60.262	Cynoglossus_semilaevis
ENSHCOG00000000585	-	100	59.584	ENSCVAG00000012483	-	100	60.296	Cyprinodon_variegatus
ENSHCOG00000000585	-	100	60.058	ENSFHEG00000003223	-	100	58.250	Fundulus_heteroclitus
ENSHCOG00000000585	-	100	59.708	ENSGAFG00000013774	-	100	60.465	Gambusia_affinis
ENSHCOG00000000585	-	100	64.912	ENSHBUG00000007567	-	100	64.327	Haplochromis_burtoni
ENSHCOG00000000585	-	100	39.574	ENSIPUG00000014628	-	80	43.662	Ictalurus_punctatus
ENSHCOG00000000585	-	100	62.115	ENSKMAG00000013261	-	100	61.267	Kryptolebias_marmoratus
ENSHCOG00000000585	-	76	65.583	ENSLBEG00000007715	-	99	65.774	Labrus_bergylta
ENSHCOG00000000585	-	99	34.135	ENSLOCG00000003546	-	95	47.664	Lepisosteus_oculatus
ENSHCOG00000000585	-	100	64.306	ENSMAMG00000024117	-	100	63.965	Mastacembelus_armatus
ENSHCOG00000000585	-	100	64.912	ENSMZEG00005025990	-	100	64.327	Maylandia_zebra
ENSHCOG00000000585	-	100	65.847	ENSMALG00000022211	-	100	65.412	Monopterus_albus
ENSHCOG00000000585	-	100	62.079	ENSORLG00000025783	-	100	61.493	Oryzias_latipes
ENSHCOG00000000585	-	100	62.079	ENSORLG00020018594	-	100	61.640	Oryzias_latipes_hni
ENSHCOG00000000585	-	100	61.933	ENSORLG00015013642	-	100	61.347	Oryzias_latipes_hsok
ENSHCOG00000000585	-	100	61.493	ENSOMEG00000007446	-	100	60.908	Oryzias_melastigma
ENSHCOG00000000585	-	84	37.434	ENSPKIG00000025441	-	97	35.435	Paramormyrops_kingsleyae
ENSHCOG00000000585	-	100	60.438	ENSPFOG00000009556	-	100	60.000	Poecilia_formosa
ENSHCOG00000000585	-	71	58.740	ENSPLAG00000020125	-	100	58.740	Poecilia_latipinna
ENSHCOG00000000585	-	100	60.438	ENSPMEG00000023122	-	100	60.000	Poecilia_mexicana
ENSHCOG00000000585	-	100	60.908	ENSPREG00000007919	-	100	60.761	Poecilia_reticulata
ENSHCOG00000000585	-	100	44.260	ENSPNAG00000001615	-	100	44.962	Pygocentrus_nattereri
ENSHCOG00000000585	-	84	38.596	ENSSFOG00015020613	-	98	36.323	Scleropages_formosus
ENSHCOG00000000585	-	89	68.780	ENSSDUG00000022785	-	100	68.455	Seriola_dumerili
ENSHCOG00000000585	-	100	67.779	ENSSLDG00000012498	-	100	68.360	Seriola_lalandi_dorsalis
ENSHCOG00000000585	-	100	67.100	ENSSPAG00000018983	-	100	67.100	Stegastes_partitus
ENSHCOG00000000585	-	100	60.819	ENSXMAG00000028965	-	100	60.117	Xiphophorus_maculatus