EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000792 (Gene tree)
Gene ID: 109514212
Gene Symbol: sb:cb81
Alias: LOC100334443|cb81
Full Name: ZFP36 ring finger protein
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3036 bases
Position: chrKV879699.1:336293-339328
Accession: 109514212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000003685	zf-CCCH	PF00642.24	4.7e-21	1	2
ENSHCOP00000003685	zf-CCCH	PF00642.24	4.7e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008322	-	2255	XM_019867099	ENSHCOP00000003685	436 (aa)	XP_019722658	-

Gene Model

Click here to download ENSHCOG00000000792's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000792's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000792	sb:cb81	76	36.389	ENSHCOG00000015801	zgc:162730	66	35.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000792	sb:cb81	87	53.015	ENSAPOG00000011209	sb:cb81	95	52.261	Acanthochromis_polyacanthus
ENSHCOG00000000792	sb:cb81	65	38.235	ENSAPOG00000014920	zgc:162730	82	33.598	Acanthochromis_polyacanthus
ENSHCOG00000000792	sb:cb81	82	34.536	ENSACIG00000017364	zgc:114130	54	44.103	Amphilophus_citrinellus
ENSHCOG00000000792	sb:cb81	96	47.752	ENSACIG00000009027	sb:cb81	100	47.414	Amphilophus_citrinellus
ENSHCOG00000000792	sb:cb81	96	50.340	ENSAOCG00000024158	sb:cb81	100	49.433	Amphiprion_ocellaris
ENSHCOG00000000792	sb:cb81	79	36.939	ENSAOCG00000002001	zgc:162730	82	33.333	Amphiprion_ocellaris
ENSHCOG00000000792	sb:cb81	96	50.340	ENSAPEG00000022405	sb:cb81	100	49.887	Amphiprion_percula
ENSHCOG00000000792	sb:cb81	79	36.939	ENSAPEG00000015490	zgc:162730	86	33.333	Amphiprion_percula
ENSHCOG00000000792	sb:cb81	70	37.082	ENSATEG00000008790	zgc:162730	66	35.099	Anabas_testudineus
ENSHCOG00000000792	sb:cb81	96	49.028	ENSATEG00000003462	sb:cb81	100	47.084	Anabas_testudineus
ENSHCOG00000000792	sb:cb81	96	48.807	ENSACLG00000013759	sb:cb81	100	49.458	Astatotilapia_calliptera
ENSHCOG00000000792	sb:cb81	96	42.128	ENSAMXG00000034874	sb:cb81	100	41.915	Astyanax_mexicanus
ENSHCOG00000000792	sb:cb81	85	33.967	ENSCSEG00000018283	zgc:162730	85	33.014	Cynoglossus_semilaevis
ENSHCOG00000000792	sb:cb81	96	44.820	ENSCSEG00000014426	sb:cb81	86	45.666	Cynoglossus_semilaevis
ENSHCOG00000000792	sb:cb81	96	47.598	ENSCVAG00000009207	sb:cb81	100	47.598	Cyprinodon_variegatus
ENSHCOG00000000792	sb:cb81	96	43.567	ENSDARG00000040503	sb:cb81	100	44.419	Danio_rerio
ENSHCOG00000000792	sb:cb81	52	42.437	ENSDARG00000040725	zgc:114130	60	42.437	Danio_rerio
ENSHCOG00000000792	sb:cb81	96	45.595	ENSELUG00000013045	sb:cb81	100	43.956	Esox_lucius
ENSHCOG00000000792	sb:cb81	65	37.755	ENSELUG00000013158	zgc:162730	86	32.796	Esox_lucius
ENSHCOG00000000792	sb:cb81	96	50.108	ENSFHEG00000022187	sb:cb81	100	49.675	Fundulus_heteroclitus
ENSHCOG00000000792	sb:cb81	53	38.129	ENSFHEG00000000656	zgc:114130	63	38.489	Fundulus_heteroclitus
ENSHCOG00000000792	sb:cb81	65	46.732	ENSGMOG00000016803	sb:cb81	91	50.000	Gadus_morhua
ENSHCOG00000000792	sb:cb81	96	50.114	ENSGAFG00000015700	sb:cb81	100	49.657	Gambusia_affinis
ENSHCOG00000000792	sb:cb81	64	39.667	ENSGACG00000008344	zgc:114130	83	40.328	Gasterosteus_aculeatus
ENSHCOG00000000792	sb:cb81	64	36.667	ENSGACG00000008351	zgc:162730	82	35.235	Gasterosteus_aculeatus
ENSHCOG00000000792	sb:cb81	80	51.213	ENSGACG00000013400	sb:cb81	98	50.959	Gasterosteus_aculeatus
ENSHCOG00000000792	sb:cb81	96	48.180	ENSHBUG00000002383	sb:cb81	100	48.276	Haplochromis_burtoni
ENSHCOG00000000792	sb:cb81	53	58.300	ENSIPUG00000011378	sb:cb81	68	55.731	Ictalurus_punctatus
ENSHCOG00000000792	sb:cb81	64	37.627	ENSIPUG00000018256	zgc:114130	50	41.350	Ictalurus_punctatus
ENSHCOG00000000792	sb:cb81	52	40.794	ENSKMAG00000019287	zgc:114130	60	42.146	Kryptolebias_marmoratus
ENSHCOG00000000792	sb:cb81	96	48.359	ENSKMAG00000009884	sb:cb81	100	48.043	Kryptolebias_marmoratus
ENSHCOG00000000792	sb:cb81	96	46.813	ENSLBEG00000018376	sb:cb81	100	48.018	Labrus_bergylta
ENSHCOG00000000792	sb:cb81	96	32.911	ENSLBEG00000018387	zgc:114130	99	31.983	Labrus_bergylta
ENSHCOG00000000792	sb:cb81	52	39.130	ENSLACG00000015967	ZFP36L1	64	38.521	Latimeria_chalumnae
ENSHCOG00000000792	sb:cb81	65	39.365	ENSLACG00000012879	-	68	39.375	Latimeria_chalumnae
ENSHCOG00000000792	sb:cb81	56	41.923	ENSLACG00000015980	-	55	42.411	Latimeria_chalumnae
ENSHCOG00000000792	sb:cb81	62	51.389	ENSLACG00000015732	sb:cb81	75	49.306	Latimeria_chalumnae
ENSHCOG00000000792	sb:cb81	76	33.333	ENSLOCG00000014597	zgc:162730	78	33.138	Lepisosteus_oculatus
ENSHCOG00000000792	sb:cb81	61	52.525	ENSLOCG00000014587	sb:cb81	75	51.678	Lepisosteus_oculatus
ENSHCOG00000000792	sb:cb81	96	46.526	ENSMAMG00000020144	sb:cb81	90	46.567	Mastacembelus_armatus
ENSHCOG00000000792	sb:cb81	65	35.831	ENSMAMG00000007516	zgc:162730	87	33.005	Mastacembelus_armatus
ENSHCOG00000000792	sb:cb81	96	49.127	ENSMZEG00005016001	-	100	49.782	Maylandia_zebra
ENSHCOG00000000792	sb:cb81	96	49.020	ENSMZEG00005024684	sb:cb81	100	49.673	Maylandia_zebra
ENSHCOG00000000792	sb:cb81	96	47.153	ENSMMOG00000010073	sb:cb81	100	45.538	Mola_mola
ENSHCOG00000000792	sb:cb81	66	41.275	ENSMALG00000021140	-	98	39.661	Monopterus_albus
ENSHCOG00000000792	sb:cb81	65	37.987	ENSMALG00000002348	zgc:162730	86	31.234	Monopterus_albus
ENSHCOG00000000792	sb:cb81	96	48.786	ENSNBRG00000006231	sb:cb81	100	48.444	Neolamprologus_brichardi
ENSHCOG00000000792	sb:cb81	96	47.752	ENSONIG00000001259	sb:cb81	100	48.060	Oreochromis_niloticus
ENSHCOG00000000792	sb:cb81	96	50.564	ENSORLG00000024026	sb:cb81	86	49.661	Oryzias_latipes
ENSHCOG00000000792	sb:cb81	79	63.492	ENSORLG00020021084	sb:cb81	100	49.887	Oryzias_latipes_hni
ENSHCOG00000000792	sb:cb81	96	50.113	ENSORLG00015010105	sb:cb81	100	49.660	Oryzias_latipes_hsok
ENSHCOG00000000792	sb:cb81	83	34.596	ENSOMEG00000017752	zgc:162730	67	37.188	Oryzias_melastigma
ENSHCOG00000000792	sb:cb81	96	50.805	ENSOMEG00000020565	sb:cb81	100	50.805	Oryzias_melastigma
ENSHCOG00000000792	sb:cb81	50	48.858	ENSPMGG00000009232	sb:cb81	75	47.465	Periophthalmus_magnuspinnatus
ENSHCOG00000000792	sb:cb81	96	49.772	ENSPFOG00000013806	sb:cb81	100	49.772	Poecilia_formosa
ENSHCOG00000000792	sb:cb81	86	49.746	ENSPLAG00000020158	sb:cb81	96	49.239	Poecilia_latipinna
ENSHCOG00000000792	sb:cb81	96	49.772	ENSPMEG00000022425	sb:cb81	100	49.772	Poecilia_mexicana
ENSHCOG00000000792	sb:cb81	96	49.206	ENSPREG00000017495	sb:cb81	100	49.660	Poecilia_reticulata
ENSHCOG00000000792	sb:cb81	96	48.678	ENSPNYG00000007502	sb:cb81	100	48.337	Pundamilia_nyererei
ENSHCOG00000000792	sb:cb81	96	44.671	ENSPNAG00000030063	sb:cb81	100	44.570	Pygocentrus_nattereri
ENSHCOG00000000792	sb:cb81	96	38.427	ENSSFOG00015003179	sb:cb81	63	47.656	Scleropages_formosus
ENSHCOG00000000792	sb:cb81	65	38.907	ENSSMAG00000018612	zgc:162730	80	34.959	Scophthalmus_maximus
ENSHCOG00000000792	sb:cb81	57	49.612	ENSSMAG00000004403	sb:cb81	94	48.837	Scophthalmus_maximus
ENSHCOG00000000792	sb:cb81	65	37.621	ENSSDUG00000002247	zgc:162730	99	32.151	Seriola_dumerili
ENSHCOG00000000792	sb:cb81	96	49.469	ENSSDUG00000004426	sb:cb81	100	47.558	Seriola_dumerili
ENSHCOG00000000792	sb:cb81	96	49.786	ENSSLDG00000018035	sb:cb81	100	47.863	Seriola_lalandi_dorsalis
ENSHCOG00000000792	sb:cb81	65	37.662	ENSSLDG00000008502	zgc:162730	84	34.197	Seriola_lalandi_dorsalis
ENSHCOG00000000792	sb:cb81	79	37.306	ENSSPAG00000006851	zgc:162730	65	37.705	Stegastes_partitus
ENSHCOG00000000792	sb:cb81	96	50.893	ENSSPAG00000013546	sb:cb81	100	52.232	Stegastes_partitus
ENSHCOG00000000792	sb:cb81	96	47.588	ENSTRUG00000020720	sb:cb81	100	47.204	Takifugu_rubripes
ENSHCOG00000000792	sb:cb81	62	83.333	ENSTNIG00000019802	sb:cb81	94	83.333	Tetraodon_nigroviridis
ENSHCOG00000000792	sb:cb81	61	45.620	ENSXCOG00000010688	sb:cb81	86	45.620	Xiphophorus_couchianus
ENSHCOG00000000792	sb:cb81	96	50.000	ENSXMAG00000004681	sb:cb81	99	49.315	Xiphophorus_maculatus