EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000818 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 9387 bases
Position: chrKV880188.1:4887268-4896654
Accession: 109523216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004022	KH_1	PF00013.29	3.1e-51	1	3
ENSHCOP00000004022	KH_1	PF00013.29	3.1e-51	2	3
ENSHCOP00000004022	KH_1	PF00013.29	3.1e-51	3	3
ENSHCOP00000003986	KH_1	PF00013.29	3e-41	1	3
ENSHCOP00000003986	KH_1	PF00013.29	3e-41	2	3
ENSHCOP00000003986	KH_1	PF00013.29	3e-41	3	3
ENSHCOP00000019799	KH_1	PF00013.29	2.5e-31	1	2
ENSHCOP00000019799	KH_1	PF00013.29	2.5e-31	2	2
ENSHCOP00000004022	KH_2	PF07650.17	1.9e-14	1	1
ENSHCOP00000019799	KH_2	PF07650.17	3.1e-07	1	1
ENSHCOP00000003986	KH_2	PF07650.17	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007812	-	1026	XM_019882220	ENSHCOP00000003986	341 (aa)	XP_019737779	-
ENSHCOT00000007827	-	657	-	ENSHCOP00000019799	218 (aa)	-	-
ENSHCOT00000007762	-	876	-	ENSHCOP00000004022	291 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000000818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000818	zgc:110045	74	40.323	ENSHCOG00000019136	-	88	31.395
ENSHCOG00000000818	zgc:110045	96	58.852	ENSHCOG00000010838	-	62	70.139
ENSHCOG00000000818	zgc:110045	96	66.667	ENSHCOG00000017868	pcbp3	94	61.702
ENSHCOG00000000818	zgc:110045	98	61.279	ENSHCOG00000019886	pcbp2	97	61.279
ENSHCOG00000000818	zgc:110045	76	48.077	ENSHCOG00000019870	hnrpkl	50	48.077
ENSHCOG00000000818	zgc:110045	77	48.077	ENSHCOG00000011097	hnrnpk	51	48.077
ENSHCOG00000000818	zgc:110045	98	66.216	ENSHCOG00000020951	PCBP2	97	66.216
ENSHCOG00000000818	zgc:110045	99	30.667	ENSHCOG00000003639	FUBP3	65	31.293
ENSHCOG00000000818	zgc:110045	95	38.667	ENSHCOG00000020488	khsrp	60	38.667
ENSHCOG00000000818	zgc:110045	92	32.886	ENSHCOG00000021170	-	63	32.886
ENSHCOG00000000818	zgc:110045	93	34.058	ENSHCOG00000018090	igf2bp2b	62	34.058
ENSHCOG00000000818	zgc:110045	100	66.346	ENSHCOG00000006067	-	98	66.346
ENSHCOG00000000818	zgc:110045	96	32.704	ENSHCOG00000000578	igf2bp3	65	32.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000818	zgc:110045	97	72.986	ENSG00000183570	PCBP3	99	62.022	Homo_sapiens
ENSHCOG00000000818	zgc:110045	99	90.367	ENSAPOG00000023735	zgc:110045	100	78.223	Acanthochromis_polyacanthus
ENSHCOG00000000818	zgc:110045	100	89.140	ENSACIG00000002577	zgc:110045	100	89.140	Amphilophus_citrinellus
ENSHCOG00000000818	zgc:110045	97	86.730	ENSAOCG00000005266	zgc:110045	100	88.318	Amphiprion_ocellaris
ENSHCOG00000000818	zgc:110045	99	89.450	ENSAPEG00000000729	zgc:110045	73	76.540	Amphiprion_percula
ENSHCOG00000000818	zgc:110045	84	97.170	ENSATEG00000011191	zgc:110045	62	97.170	Anabas_testudineus
ENSHCOG00000000818	zgc:110045	99	89.450	ENSACLG00000019285	zgc:110045	73	76.833	Astatotilapia_calliptera
ENSHCOG00000000818	zgc:110045	96	73.684	ENSBTAG00000030775	PCBP3	99	61.957	Bos_taurus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSCAFG00000011907	PCBP3	81	73.684	Canis_familiaris
ENSHCOG00000000818	zgc:110045	96	73.206	ENSCHIG00000015841	PCBP3	90	62.963	Capra_hircus
ENSHCOG00000000818	zgc:110045	98	65.823	ENSTSYG00000005254	PCBP3	92	65.823	Carlito_syrichta
ENSHCOG00000000818	zgc:110045	99	51.576	ENSCAPG00000006767	PCBP3	83	51.576	Cavia_aperea
ENSHCOG00000000818	zgc:110045	96	73.684	ENSCPOG00000003648	PCBP3	81	73.684	Cavia_porcellus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSCCAG00000024561	PCBP3	99	61.972	Cebus_capucinus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSCATG00000038419	PCBP3	99	64.225	Cercocebus_atys
ENSHCOG00000000818	zgc:110045	96	73.684	ENSCLAG00000006667	PCBP3	81	73.684	Chinchilla_lanigera
ENSHCOG00000000818	zgc:110045	96	73.684	ENSCANG00000026757	PCBP3	99	61.685	Colobus_angolensis_palliatus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSCGRG00001006836	Pcbp3	81	73.684	Cricetulus_griseus_chok1gshd
ENSHCOG00000000818	zgc:110045	96	73.684	ENSCGRG00000001837	Pcbp3	81	73.684	Cricetulus_griseus_crigri
ENSHCOG00000000818	zgc:110045	99	89.450	ENSCSEG00000010020	zgc:110045	91	90.278	Cynoglossus_semilaevis
ENSHCOG00000000818	zgc:110045	95	86.957	ENSCVAG00000004726	zgc:110045	93	86.957	Cyprinodon_variegatus
ENSHCOG00000000818	zgc:110045	99	76.712	ENSDARG00000057141	zgc:110045	97	76.712	Danio_rerio
ENSHCOG00000000818	zgc:110045	96	73.684	ENSDNOG00000049518	PCBP3	82	73.684	Dasypus_novemcinctus
ENSHCOG00000000818	zgc:110045	96	66.094	ENSDORG00000003640	Pcbp3	93	66.094	Dipodomys_ordii
ENSHCOG00000000818	zgc:110045	94	72.683	ENSEBUG00000009697	zgc:110045	96	71.503	Eptatretus_burgeri
ENSHCOG00000000818	zgc:110045	96	73.206	ENSEASG00005007068	PCBP3	89	67.619	Equus_asinus_asinus
ENSHCOG00000000818	zgc:110045	96	73.206	ENSECAG00000012413	PCBP3	89	67.619	Equus_caballus
ENSHCOG00000000818	zgc:110045	99	81.818	ENSELUG00000019784	zgc:110045	74	79.094	Esox_lucius
ENSHCOG00000000818	zgc:110045	96	73.684	ENSFCAG00000014812	PCBP3	89	66.667	Felis_catus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSFDAG00000009117	PCBP3	89	67.619	Fukomys_damarensis
ENSHCOG00000000818	zgc:110045	94	86.473	ENSFHEG00000018838	-	94	86.473	Fundulus_heteroclitus
ENSHCOG00000000818	zgc:110045	93	85.577	ENSGMOG00000005953	zgc:110045	96	75.786	Gadus_morhua
ENSHCOG00000000818	zgc:110045	99	89.450	ENSGAFG00000017864	zgc:110045	96	89.450	Gambusia_affinis
ENSHCOG00000000818	zgc:110045	97	88.372	ENSGACG00000003044	zgc:110045	100	76.879	Gasterosteus_aculeatus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSGGOG00000003683	PCBP3	89	67.619	Gorilla_gorilla
ENSHCOG00000000818	zgc:110045	99	89.450	ENSHBUG00000012495	zgc:110045	100	77.650	Haplochromis_burtoni
ENSHCOG00000000818	zgc:110045	96	73.684	ENSHGLG00000018620	PCBP3	83	73.206	Heterocephalus_glaber_female
ENSHCOG00000000818	zgc:110045	96	73.684	ENSHGLG00100013590	PCBP3	83	73.206	Heterocephalus_glaber_male
ENSHCOG00000000818	zgc:110045	99	73.973	ENSIPUG00000003932	zgc:110045	81	73.973	Ictalurus_punctatus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSSTOG00000007178	PCBP3	81	73.684	Ictidomys_tridecemlineatus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSJJAG00000021192	Pcbp3	81	73.684	Jaculus_jaculus
ENSHCOG00000000818	zgc:110045	91	87.437	ENSKMAG00000016179	-	94	92.708	Kryptolebias_marmoratus
ENSHCOG00000000818	zgc:110045	97	86.429	ENSLBEG00000023074	zgc:110045	100	78.592	Labrus_bergylta
ENSHCOG00000000818	zgc:110045	96	73.206	ENSLAFG00000020835	PCBP3	99	63.248	Loxodonta_africana
ENSHCOG00000000818	zgc:110045	96	73.684	ENSMFAG00000034574	PCBP3	99	64.225	Macaca_fascicularis
ENSHCOG00000000818	zgc:110045	96	73.684	ENSMMUG00000003825	PCBP3	98	62.342	Macaca_mulatta
ENSHCOG00000000818	zgc:110045	96	73.684	ENSMNEG00000035551	PCBP3	98	67.619	Macaca_nemestrina
ENSHCOG00000000818	zgc:110045	96	73.684	ENSMLEG00000038785	PCBP3	99	64.225	Mandrillus_leucophaeus
ENSHCOG00000000818	zgc:110045	99	88.991	ENSMAMG00000014389	zgc:110045	100	77.059	Mastacembelus_armatus
ENSHCOG00000000818	zgc:110045	99	89.450	ENSMZEG00005011785	zgc:110045	73	76.833	Maylandia_zebra
ENSHCOG00000000818	zgc:110045	94	74.634	ENSMAUG00000007036	Pcbp3	80	74.634	Mesocricetus_auratus
ENSHCOG00000000818	zgc:110045	96	73.206	ENSMICG00000012679	PCBP3	89	67.302	Microcebus_murinus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSMOCG00000016127	Pcbp3	81	73.684	Microtus_ochrogaster
ENSHCOG00000000818	zgc:110045	92	87.000	ENSMMOG00000008399	zgc:110045	97	86.408	Mola_mola
ENSHCOG00000000818	zgc:110045	92	87.000	ENSMALG00000008763	zgc:110045	100	83.732	Monopterus_albus
ENSHCOG00000000818	zgc:110045	97	72.986	MGP_CAROLIEiJ_G0015475	Pcbp3	94	74.528	Mus_caroli
ENSHCOG00000000818	zgc:110045	97	72.986	ENSMUSG00000001120	Pcbp3	94	74.528	Mus_musculus
ENSHCOG00000000818	zgc:110045	99	75.714	MGP_PahariEiJ_G0030889	Pcbp3	94	74.528	Mus_pahari
ENSHCOG00000000818	zgc:110045	99	75.714	MGP_SPRETEiJ_G0016288	Pcbp3	94	74.528	Mus_spretus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSMLUG00000003074	PCBP3	81	73.684	Myotis_lucifugus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSNGAG00000005416	Pcbp3	81	73.684	Nannospalax_galili
ENSHCOG00000000818	zgc:110045	99	89.450	ENSNBRG00000017646	zgc:110045	73	76.833	Neolamprologus_brichardi
ENSHCOG00000000818	zgc:110045	96	73.684	ENSNLEG00000002639	PCBP3	89	67.619	Nomascus_leucogenys
ENSHCOG00000000818	zgc:110045	96	75.714	ENSMEUG00000012960	PCBP3	99	60.331	Notamacropus_eugenii
ENSHCOG00000000818	zgc:110045	96	73.206	ENSODEG00000012873	PCBP3	81	73.206	Octodon_degus
ENSHCOG00000000818	zgc:110045	99	89.908	ENSONIG00000010370	zgc:110045	76	78.914	Oreochromis_niloticus
ENSHCOG00000000818	zgc:110045	96	67.826	ENSOANG00000006265	PCBP3	97	62.500	Ornithorhynchus_anatinus
ENSHCOG00000000818	zgc:110045	99	89.450	ENSORLG00000014385	-	71	89.450	Oryzias_latipes
ENSHCOG00000000818	zgc:110045	99	89.450	ENSORLG00020003139	zgc:110045	89	89.450	Oryzias_latipes_hni
ENSHCOG00000000818	zgc:110045	99	88.991	ENSOMEG00000015459	-	71	88.991	Oryzias_melastigma
ENSHCOG00000000818	zgc:110045	96	69.378	ENSOARG00000012704	PCBP3	91	60.458	Ovis_aries
ENSHCOG00000000818	zgc:110045	96	73.684	ENSPPAG00000021940	PCBP3	89	67.619	Pan_paniscus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSPPRG00000003933	PCBP3	89	66.667	Panthera_pardus
ENSHCOG00000000818	zgc:110045	99	53.145	ENSPTIG00000012038	PCBP3	89	53.651	Panthera_tigris_altaica
ENSHCOG00000000818	zgc:110045	99	47.573	ENSPTRG00000014010	PCBP3	99	46.612	Pan_troglodytes
ENSHCOG00000000818	zgc:110045	96	73.684	ENSPANG00000023631	PCBP3	99	64.225	Papio_anubis
ENSHCOG00000000818	zgc:110045	92	79.612	ENSPMGG00000021588	-	73	69.436	Periophthalmus_magnuspinnatus
ENSHCOG00000000818	zgc:110045	99	56.881	ENSPMGG00000022531	-	98	56.881	Periophthalmus_magnuspinnatus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSPEMG00000000587	Pcbp3	91	63.818	Peromyscus_maniculatus_bairdii
ENSHCOG00000000818	zgc:110045	69	65.289	ENSPMAG00000004719	zgc:110045	94	71.667	Petromyzon_marinus
ENSHCOG00000000818	zgc:110045	97	88.837	ENSPFOG00000002348	zgc:110045	97	77.389	Poecilia_formosa
ENSHCOG00000000818	zgc:110045	99	88.532	ENSPLAG00000017488	zgc:110045	95	88.532	Poecilia_latipinna
ENSHCOG00000000818	zgc:110045	99	89.450	ENSPMEG00000012762	zgc:110045	96	89.450	Poecilia_mexicana
ENSHCOG00000000818	zgc:110045	99	88.073	ENSPREG00000001797	zgc:110045	97	87.727	Poecilia_reticulata
ENSHCOG00000000818	zgc:110045	83	75.824	ENSPPYG00000011525	-	83	66.250	Pongo_abelii
ENSHCOG00000000818	zgc:110045	90	78.571	ENSPCAG00000001454	PCBP3	74	78.571	Procavia_capensis
ENSHCOG00000000818	zgc:110045	96	73.206	ENSPCOG00000013797	PCBP3	99	67.619	Propithecus_coquereli
ENSHCOG00000000818	zgc:110045	89	80.105	ENSPVAG00000000832	PCBP3	75	75.238	Pteropus_vampyrus
ENSHCOG00000000818	zgc:110045	100	88.688	ENSPNYG00000004637	zgc:110045	100	88.688	Pundamilia_nyererei
ENSHCOG00000000818	zgc:110045	99	76.147	ENSPNAG00000004501	zgc:110045	97	76.147	Pygocentrus_nattereri
ENSHCOG00000000818	zgc:110045	96	73.684	ENSRROG00000034567	PCBP3	99	57.867	Rhinopithecus_roxellana
ENSHCOG00000000818	zgc:110045	96	73.684	ENSSBOG00000005789	PCBP3	84	73.684	Saimiri_boliviensis_boliviensis
ENSHCOG00000000818	zgc:110045	100	90.045	ENSSMAG00000013541	zgc:110045	93	90.045	Scophthalmus_maximus
ENSHCOG00000000818	zgc:110045	88	73.478	ENSSDUG00000019371	zgc:110045	66	75.610	Seriola_dumerili
ENSHCOG00000000818	zgc:110045	99	90.826	ENSSLDG00000021064	zgc:110045	73	77.713	Seriola_lalandi_dorsalis
ENSHCOG00000000818	zgc:110045	63	78.102	ENSSARG00000007629	-	100	58.879	Sorex_araneus
ENSHCOG00000000818	zgc:110045	99	90.367	ENSSPAG00000000563	zgc:110045	100	78.223	Stegastes_partitus
ENSHCOG00000000818	zgc:110045	96	73.684	ENSSSCG00000023041	PCBP3	89	66.667	Sus_scrofa
ENSHCOG00000000818	zgc:110045	92	87.000	ENSTRUG00000017789	zgc:110045	95	91.667	Takifugu_rubripes
ENSHCOG00000000818	zgc:110045	85	80.851	ENSTNIG00000003546	zgc:110045	92	85.027	Tetraodon_nigroviridis
ENSHCOG00000000818	zgc:110045	96	55.981	ENSTBEG00000011882	-	73	53.600	Tupaia_belangeri
ENSHCOG00000000818	zgc:110045	96	73.206	ENSUAMG00000006491	PCBP3	100	64.894	Ursus_americanus
ENSHCOG00000000818	zgc:110045	99	59.437	ENSUMAG00000025403	PCBP3	91	59.437	Ursus_maritimus
ENSHCOG00000000818	zgc:110045	96	68.900	ENSVVUG00000023862	PCBP3	99	61.960	Vulpes_vulpes
ENSHCOG00000000818	zgc:110045	87	82.105	ENSXCOG00000005968	zgc:110045	96	82.105	Xiphophorus_couchianus
ENSHCOG00000000818	zgc:110045	99	88.532	ENSXMAG00000008030	zgc:110045	65	88.532	Xiphophorus_maculatus