EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000884 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 35674 bases
Position: chrKV880451.1:3016150-3051823
Accession: 109532173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000131	ResIII	PF04851.15	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014296	-	3879	XM_019896849	ENSHCOP00000000131	1292 (aa)	XP_019752408	-

Gene Model

Click here to download ENSHCOG00000000884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000884's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000884	si:ch73-63e15.2	77	54.219	ENSHCOG00000003246	sbno1	81	54.219

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000884	si:ch73-63e15.2	86	67.324	ENSG00000064932	SBNO2	89	66.810	Homo_sapiens
ENSHCOG00000000884	si:ch73-63e15.2	96	85.066	ENSAPOG00000003185	si:ch73-63e15.2	93	84.403	Acanthochromis_polyacanthus
ENSHCOG00000000884	si:ch73-63e15.2	96	85.503	ENSAOCG00000016581	si:ch73-63e15.2	98	84.878	Amphiprion_ocellaris
ENSHCOG00000000884	si:ch73-63e15.2	96	85.425	ENSAPEG00000008862	si:ch73-63e15.2	80	87.841	Amphiprion_percula
ENSHCOG00000000884	si:ch73-63e15.2	96	83.582	ENSATEG00000023838	si:ch73-63e15.2	99	87.462	Anabas_testudineus
ENSHCOG00000000884	si:ch73-63e15.2	85	71.466	ENSAPLG00000007158	SBNO2	90	71.466	Anas_platyrhynchos
ENSHCOG00000000884	si:ch73-63e15.2	86	67.009	ENSANAG00000026685	SBNO2	90	66.581	Aotus_nancymaae
ENSHCOG00000000884	si:ch73-63e15.2	95	80.000	ENSACLG00000005090	si:ch73-63e15.2	81	80.900	Astatotilapia_calliptera
ENSHCOG00000000884	si:ch73-63e15.2	94	74.820	ENSAMXG00000018868	sbno2a	99	74.879	Astyanax_mexicanus
ENSHCOG00000000884	si:ch73-63e15.2	93	75.317	ENSAMXG00000015881	si:ch73-63e15.2	84	79.391	Astyanax_mexicanus
ENSHCOG00000000884	si:ch73-63e15.2	85	69.372	ENSBTAG00000020780	SBNO2	87	68.476	Bos_taurus
ENSHCOG00000000884	si:ch73-63e15.2	84	69.702	ENSCAFG00000019543	SBNO2	83	69.062	Canis_familiaris
ENSHCOG00000000884	si:ch73-63e15.2	84	69.702	ENSCAFG00020017115	SBNO2	88	69.062	Canis_lupus_dingo
ENSHCOG00000000884	si:ch73-63e15.2	86	68.318	ENSCHIG00000026127	SBNO2	87	67.436	Capra_hircus
ENSHCOG00000000884	si:ch73-63e15.2	84	66.461	ENSCAPG00000005731	SBNO2	93	66.461	Cavia_aperea
ENSHCOG00000000884	si:ch73-63e15.2	84	66.345	ENSCPOG00000007477	SBNO2	87	65.946	Cavia_porcellus
ENSHCOG00000000884	si:ch73-63e15.2	86	67.181	ENSCCAG00000037518	SBNO2	90	66.924	Cebus_capucinus
ENSHCOG00000000884	si:ch73-63e15.2	86	67.637	ENSCATG00000037046	SBNO2	89	67.009	Cercocebus_atys
ENSHCOG00000000884	si:ch73-63e15.2	85	67.736	ENSCLAG00000010178	SBNO2	99	68.134	Chinchilla_lanigera
ENSHCOG00000000884	si:ch73-63e15.2	84	68.472	ENSCSAG00000012317	SBNO2	83	67.832	Chlorocebus_sabaeus
ENSHCOG00000000884	si:ch73-63e15.2	92	67.451	ENSCPBG00000008920	SBNO2	97	66.828	Chrysemys_picta_bellii
ENSHCOG00000000884	si:ch73-63e15.2	82	67.113	ENSCANG00000036745	SBNO2	97	66.547	Colobus_angolensis_palliatus
ENSHCOG00000000884	si:ch73-63e15.2	85	67.277	ENSCGRG00001023960	Sbno2	85	66.463	Cricetulus_griseus_chok1gshd
ENSHCOG00000000884	si:ch73-63e15.2	85	68.527	ENSCGRG00000011984	Sbno2	85	67.714	Cricetulus_griseus_crigri
ENSHCOG00000000884	si:ch73-63e15.2	88	87.091	ENSCSEG00000006856	si:ch73-63e15.2	97	88.626	Cynoglossus_semilaevis
ENSHCOG00000000884	si:ch73-63e15.2	97	79.366	ENSCVAG00000005663	si:ch73-63e15.2	82	82.049	Cyprinodon_variegatus
ENSHCOG00000000884	si:ch73-63e15.2	96	72.958	ENSDARG00000016188	SBNO2	86	75.853	Danio_rerio
ENSHCOG00000000884	si:ch73-63e15.2	99	71.118	ENSDARG00000098801	sbno2a	97	71.118	Danio_rerio
ENSHCOG00000000884	si:ch73-63e15.2	84	68.766	ENSDORG00000002916	Sbno2	84	68.679	Dipodomys_ordii
ENSHCOG00000000884	si:ch73-63e15.2	86	68.782	ENSEASG00005021621	SBNO2	89	68.096	Equus_asinus_asinus
ENSHCOG00000000884	si:ch73-63e15.2	86	68.868	ENSECAG00000011827	SBNO2	89	68.182	Equus_caballus
ENSHCOG00000000884	si:ch73-63e15.2	89	84.340	ENSELUG00000020457	si:ch73-63e15.2	81	83.830	Esox_lucius
ENSHCOG00000000884	si:ch73-63e15.2	85	70.603	ENSFALG00000013988	SBNO2	85	71.552	Ficedula_albicollis
ENSHCOG00000000884	si:ch73-63e15.2	83	66.313	ENSFDAG00000015186	SBNO2	86	66.283	Fukomys_damarensis
ENSHCOG00000000884	si:ch73-63e15.2	95	82.157	ENSFHEG00000022262	si:ch73-63e15.2	78	84.648	Fundulus_heteroclitus
ENSHCOG00000000884	si:ch73-63e15.2	85	85.146	ENSGMOG00000007542	si:ch73-63e15.2	96	85.234	Gadus_morhua
ENSHCOG00000000884	si:ch73-63e15.2	85	71.625	ENSGALG00000037522	SBNO2	85	71.515	Gallus_gallus
ENSHCOG00000000884	si:ch73-63e15.2	93	82.773	ENSGAFG00000004860	si:ch73-63e15.2	94	83.675	Gambusia_affinis
ENSHCOG00000000884	si:ch73-63e15.2	85	87.130	ENSGACG00000013190	si:ch73-63e15.2	95	87.043	Gasterosteus_aculeatus
ENSHCOG00000000884	si:ch73-63e15.2	88	72.633	ENSGAGG00000008348	SBNO2	86	71.330	Gopherus_agassizii
ENSHCOG00000000884	si:ch73-63e15.2	95	80.000	ENSHBUG00000010742	si:ch73-63e15.2	79	84.020	Haplochromis_burtoni
ENSHCOG00000000884	si:ch73-63e15.2	84	68.449	ENSHGLG00000008739	SBNO2	84	67.920	Heterocephalus_glaber_female
ENSHCOG00000000884	si:ch73-63e15.2	84	68.361	ENSHGLG00100005269	SBNO2	99	67.895	Heterocephalus_glaber_male
ENSHCOG00000000884	si:ch73-63e15.2	92	76.340	ENSIPUG00000000537	si:ch73-63e15.2	85	78.833	Ictalurus_punctatus
ENSHCOG00000000884	si:ch73-63e15.2	86	81.429	ENSIPUG00000019672	sbno2	99	77.712	Ictalurus_punctatus
ENSHCOG00000000884	si:ch73-63e15.2	90	65.366	ENSSTOG00000025832	SBNO2	84	67.832	Ictidomys_tridecemlineatus
ENSHCOG00000000884	si:ch73-63e15.2	85	64.823	ENSJJAG00000017397	Sbno2	85	64.736	Jaculus_jaculus
ENSHCOG00000000884	si:ch73-63e15.2	96	81.412	ENSKMAG00000005541	si:ch73-63e15.2	82	81.804	Kryptolebias_marmoratus
ENSHCOG00000000884	si:ch73-63e15.2	90	88.345	ENSLBEG00000025016	si:ch73-63e15.2	99	86.965	Labrus_bergylta
ENSHCOG00000000884	si:ch73-63e15.2	91	78.107	ENSLOCG00000004643	si:ch73-63e15.2	85	82.143	Lepisosteus_oculatus
ENSHCOG00000000884	si:ch73-63e15.2	83	65.810	ENSLAFG00000008824	SBNO2	89	65.633	Loxodonta_africana
ENSHCOG00000000884	si:ch73-63e15.2	86	66.153	ENSMFAG00000040030	SBNO2	91	65.695	Macaca_fascicularis
ENSHCOG00000000884	si:ch73-63e15.2	84	68.472	ENSMMUG00000010886	SBNO2	89	65.893	Macaca_mulatta
ENSHCOG00000000884	si:ch73-63e15.2	86	67.637	ENSMNEG00000039927	SBNO2	89	67.009	Macaca_nemestrina
ENSHCOG00000000884	si:ch73-63e15.2	77	68.868	ENSMLEG00000038556	SBNO2	90	68.178	Mandrillus_leucophaeus
ENSHCOG00000000884	si:ch73-63e15.2	96	84.561	ENSMAMG00000018758	si:ch73-63e15.2	78	86.700	Mastacembelus_armatus
ENSHCOG00000000884	si:ch73-63e15.2	95	80.000	ENSMZEG00005010682	si:ch73-63e15.2	81	80.900	Maylandia_zebra
ENSHCOG00000000884	si:ch73-63e15.2	87	70.034	ENSMGAG00000003801	SBNO2	92	69.865	Meleagris_gallopavo
ENSHCOG00000000884	si:ch73-63e15.2	85	68.646	ENSMAUG00000008034	Sbno2	84	68.476	Mesocricetus_auratus
ENSHCOG00000000884	si:ch73-63e15.2	84	68.564	ENSMICG00000013071	SBNO2	87	68.301	Microcebus_murinus
ENSHCOG00000000884	si:ch73-63e15.2	84	67.776	ENSMOCG00000010504	Sbno2	84	68.273	Microtus_ochrogaster
ENSHCOG00000000884	si:ch73-63e15.2	85	70.931	ENSMODG00000005382	SBNO2	82	70.496	Monodelphis_domestica
ENSHCOG00000000884	si:ch73-63e15.2	76	80.080	ENSMALG00000021831	si:ch73-63e15.2	99	79.276	Monopterus_albus
ENSHCOG00000000884	si:ch73-63e15.2	84	68.126	ENSMUSG00000035673	Sbno2	93	67.951	Mus_musculus
ENSHCOG00000000884	si:ch73-63e15.2	84	68.476	MGP_PahariEiJ_G0030976	Sbno2	84	68.011	Mus_pahari
ENSHCOG00000000884	si:ch73-63e15.2	84	68.651	MGP_SPRETEiJ_G0016381	Sbno2	90	68.186	Mus_spretus
ENSHCOG00000000884	si:ch73-63e15.2	72	71.792	ENSMPUG00000008747	SBNO2	91	71.050	Mustela_putorius_furo
ENSHCOG00000000884	si:ch73-63e15.2	84	67.745	ENSNGAG00000004308	Sbno2	86	67.629	Nannospalax_galili
ENSHCOG00000000884	si:ch73-63e15.2	95	79.450	ENSNBRG00000022968	si:ch73-63e15.2	96	90.756	Neolamprologus_brichardi
ENSHCOG00000000884	si:ch73-63e15.2	81	69.031	ENSNLEG00000001305	SBNO2	88	69.031	Nomascus_leucogenys
ENSHCOG00000000884	si:ch73-63e15.2	71	67.091	ENSMEUG00000013511	-	78	67.091	Notamacropus_eugenii
ENSHCOG00000000884	si:ch73-63e15.2	84	68.634	ENSOPRG00000017238	SBNO2	94	68.458	Ochotona_princeps
ENSHCOG00000000884	si:ch73-63e15.2	84	67.395	ENSODEG00000011822	SBNO2	85	66.870	Octodon_degus
ENSHCOG00000000884	si:ch73-63e15.2	95	78.830	ENSONIG00000002490	si:ch73-63e15.2	86	87.315	Oreochromis_niloticus
ENSHCOG00000000884	si:ch73-63e15.2	96	78.725	ENSORLG00000000913	si:ch73-63e15.2	80	84.687	Oryzias_latipes
ENSHCOG00000000884	si:ch73-63e15.2	96	80.157	ENSORLG00020010978	si:ch73-63e15.2	81	82.713	Oryzias_latipes_hni
ENSHCOG00000000884	si:ch73-63e15.2	96	78.648	ENSORLG00015000202	si:ch73-63e15.2	80	84.602	Oryzias_latipes_hsok
ENSHCOG00000000884	si:ch73-63e15.2	99	77.660	ENSOMEG00000000359	si:ch73-63e15.2	84	77.887	Oryzias_melastigma
ENSHCOG00000000884	si:ch73-63e15.2	84	66.171	ENSOARG00000011130	SBNO2	86	65.879	Ovis_aries
ENSHCOG00000000884	si:ch73-63e15.2	86	66.412	ENSPPAG00000032482	SBNO2	91	65.986	Pan_paniscus
ENSHCOG00000000884	si:ch73-63e15.2	86	67.153	ENSPTRG00000010185	SBNO2	89	66.724	Pan_troglodytes
ENSHCOG00000000884	si:ch73-63e15.2	86	64.127	ENSPANG00000009658	SBNO2	88	63.496	Papio_anubis
ENSHCOG00000000884	si:ch73-63e15.2	90	76.917	ENSPKIG00000024201	si:ch73-63e15.2	85	79.761	Paramormyrops_kingsleyae
ENSHCOG00000000884	si:ch73-63e15.2	89	71.700	ENSPKIG00000009707	-	83	78.984	Paramormyrops_kingsleyae
ENSHCOG00000000884	si:ch73-63e15.2	71	71.719	ENSPSIG00000002852	SBNO2	99	72.126	Pelodiscus_sinensis
ENSHCOG00000000884	si:ch73-63e15.2	97	80.312	ENSPMGG00000014375	si:ch73-63e15.2	97	80.156	Periophthalmus_magnuspinnatus
ENSHCOG00000000884	si:ch73-63e15.2	86	66.985	ENSPEMG00000024122	Sbno2	85	66.811	Peromyscus_maniculatus_bairdii
ENSHCOG00000000884	si:ch73-63e15.2	84	71.903	ENSPCIG00000011264	SBNO2	81	72.352	Phascolarctos_cinereus
ENSHCOG00000000884	si:ch73-63e15.2	96	79.573	ENSPFOG00000004096	si:ch73-63e15.2	99	85.664	Poecilia_formosa
ENSHCOG00000000884	si:ch73-63e15.2	90	84.372	ENSPLAG00000014653	si:ch73-63e15.2	82	83.442	Poecilia_latipinna
ENSHCOG00000000884	si:ch73-63e15.2	96	81.634	ENSPMEG00000002129	si:ch73-63e15.2	96	84.226	Poecilia_mexicana
ENSHCOG00000000884	si:ch73-63e15.2	98	78.293	ENSPREG00000006755	si:ch73-63e15.2	83	78.991	Poecilia_reticulata
ENSHCOG00000000884	si:ch73-63e15.2	79	69.431	ENSPCAG00000012256	SBNO2	77	68.919	Procavia_capensis
ENSHCOG00000000884	si:ch73-63e15.2	84	62.358	ENSPCOG00000015216	SBNO2	87	62.009	Propithecus_coquereli
ENSHCOG00000000884	si:ch73-63e15.2	95	80.000	ENSPNYG00000019926	si:ch73-63e15.2	79	84.020	Pundamilia_nyererei
ENSHCOG00000000884	si:ch73-63e15.2	98	73.668	ENSPNAG00000020260	si:ch73-63e15.2	88	76.615	Pygocentrus_nattereri
ENSHCOG00000000884	si:ch73-63e15.2	86	80.458	ENSPNAG00000026609	sbno2a	86	78.096	Pygocentrus_nattereri
ENSHCOG00000000884	si:ch73-63e15.2	85	68.576	ENSRNOG00000013987	Sbno2	89	68.115	Rattus_norvegicus
ENSHCOG00000000884	si:ch73-63e15.2	79	66.885	ENSRBIG00000009740	SBNO2	87	66.386	Rhinopithecus_bieti
ENSHCOG00000000884	si:ch73-63e15.2	75	69.856	ENSRROG00000044671	SBNO2	87	69.222	Rhinopithecus_roxellana
ENSHCOG00000000884	si:ch73-63e15.2	86	67.009	ENSSBOG00000023562	SBNO2	90	66.752	Saimiri_boliviensis_boliviensis
ENSHCOG00000000884	si:ch73-63e15.2	83	70.426	ENSSHAG00000010241	SBNO2	97	70.426	Sarcophilus_harrisii
ENSHCOG00000000884	si:ch73-63e15.2	87	79.720	ENSSFOG00015005861	si:ch73-63e15.2	94	79.896	Scleropages_formosus
ENSHCOG00000000884	si:ch73-63e15.2	96	84.996	ENSSMAG00000012489	si:ch73-63e15.2	78	87.126	Scophthalmus_maximus
ENSHCOG00000000884	si:ch73-63e15.2	95	86.392	ENSSDUG00000003527	si:ch73-63e15.2	77	88.619	Seriola_dumerili
ENSHCOG00000000884	si:ch73-63e15.2	96	86.006	ENSSLDG00000004623	si:ch73-63e15.2	78	88.446	Seriola_lalandi_dorsalis
ENSHCOG00000000884	si:ch73-63e15.2	90	90.383	ENSSPAG00000017717	si:ch73-63e15.2	79	90.043	Stegastes_partitus
ENSHCOG00000000884	si:ch73-63e15.2	84	69.466	ENSSSCG00000030042	SBNO2	88	68.098	Sus_scrofa
ENSHCOG00000000884	si:ch73-63e15.2	83	87.603	ENSTRUG00000018193	si:ch73-63e15.2	86	87.603	Takifugu_rubripes
ENSHCOG00000000884	si:ch73-63e15.2	77	70.543	ENSUAMG00000006568	SBNO2	93	72.158	Ursus_americanus
ENSHCOG00000000884	si:ch73-63e15.2	84	69.615	ENSVVUG00000022823	SBNO2	82	68.975	Vulpes_vulpes
ENSHCOG00000000884	si:ch73-63e15.2	79	75.354	ENSXETG00000021579	sbno2	90	75.354	Xenopus_tropicalis
ENSHCOG00000000884	si:ch73-63e15.2	77	86.760	ENSXCOG00000009209	si:ch73-63e15.2	89	90.444	Xiphophorus_couchianus
ENSHCOG00000000884	si:ch73-63e15.2	97	80.757	ENSXMAG00000012091	si:ch73-63e15.2	87	88.828	Xiphophorus_maculatus