EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000910 (Gene tree)
Gene ID: 109507335
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10173 bases
Position: chrKV880483.1:2919814-2929986
Accession: 109507335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017254	KH_1	PF00013.29	6.6e-68	1	4
ENSHCOP00000017254	KH_1	PF00013.29	6.6e-68	2	4
ENSHCOP00000017254	KH_1	PF00013.29	6.6e-68	3	4
ENSHCOP00000017254	KH_1	PF00013.29	6.6e-68	4	4
ENSHCOP00000000166	KH_1	PF00013.29	8e-68	1	4
ENSHCOP00000000166	KH_1	PF00013.29	8e-68	2	4
ENSHCOP00000000166	KH_1	PF00013.29	8e-68	3	4
ENSHCOP00000000166	KH_1	PF00013.29	8e-68	4	4
ENSHCOP00000017254	KH_2	PF07650.17	6e-20	1	1
ENSHCOP00000000166	KH_2	PF07650.17	7.2e-20	1	1
ENSHCOP00000000166	DUF1897	PF09005.10	4.9e-15	1	1
ENSHCOP00000017254	DUF1897	PF09005.10	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014256	-	3563	XM_019856685	ENSHCOP00000017254	643 (aa)	XP_019712244	-
ENSHCOT00000014251	-	4750	XM_019856677	ENSHCOP00000000166	668 (aa)	XP_019712236	-

Gene Model

Click here to download ENSHCOG00000000910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000910	fubp1	97	54.046	ENSHCOG00000020488	khsrp	99	52.703
ENSHCOG00000000910	fubp1	89	50.377	ENSHCOG00000021170	-	78	61.538
ENSHCOG00000000910	fubp1	55	32.927	ENSHCOG00000000578	igf2bp3	68	33.140
ENSHCOG00000000910	fubp1	53	35.802	ENSHCOG00000017868	pcbp3	64	35.802
ENSHCOG00000000910	fubp1	52	30.822	ENSHCOG00000018090	igf2bp2b	65	31.690
ENSHCOG00000000910	fubp1	98	45.257	ENSHCOG00000003639	FUBP3	97	46.399
ENSHCOG00000000910	fubp1	54	40.909	ENSHCOG00000010838	-	64	35.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000910	fubp1	70	74.893	ENSG00000162613	FUBP1	100	68.256	Homo_sapiens
ENSHCOG00000000910	fubp1	99	86.830	ENSAPOG00000014845	fubp1	98	85.890	Acanthochromis_polyacanthus
ENSHCOG00000000910	fubp1	70	73.499	ENSAMEG00000007372	FUBP1	100	67.643	Ailuropoda_melanoleuca
ENSHCOG00000000910	fubp1	100	86.769	ENSACIG00000020024	fubp1	100	85.362	Amphilophus_citrinellus
ENSHCOG00000000910	fubp1	100	86.133	ENSAPEG00000012232	fubp1	100	84.839	Amphiprion_percula
ENSHCOG00000000910	fubp1	100	92.388	ENSATEG00000018619	fubp1	100	91.628	Anabas_testudineus
ENSHCOG00000000910	fubp1	66	76.761	ENSAPLG00000005965	FUBP1	100	69.231	Anas_platyrhynchos
ENSHCOG00000000910	fubp1	70	74.526	ENSACAG00000006310	FUBP1	96	68.543	Anolis_carolinensis
ENSHCOG00000000910	fubp1	100	91.493	ENSACLG00000006708	fubp1	100	91.045	Astatotilapia_calliptera
ENSHCOG00000000910	fubp1	85	84.107	ENSAMXG00000005525	fubp1	99	83.302	Astyanax_mexicanus
ENSHCOG00000000910	fubp1	70	75.107	ENSCJAG00000007062	FUBP1	100	68.619	Callithrix_jacchus
ENSHCOG00000000910	fubp1	70	74.735	ENSCAFG00000020361	FUBP1	100	68.405	Canis_familiaris
ENSHCOG00000000910	fubp1	66	76.102	ENSTSYG00000000148	FUBP1	100	68.463	Carlito_syrichta
ENSHCOG00000000910	fubp1	54	81.928	ENSCAPG00000011052	-	64	81.928	Cavia_aperea
ENSHCOG00000000910	fubp1	70	74.735	ENSCPOG00000002757	FUBP1	98	70.270	Cavia_porcellus
ENSHCOG00000000910	fubp1	91	60.665	ENSCCAG00000036537	FUBP1	100	61.219	Cebus_capucinus
ENSHCOG00000000910	fubp1	70	74.522	ENSCATG00000042126	FUBP1	100	68.256	Cercocebus_atys
ENSHCOG00000000910	fubp1	70	74.735	ENSCLAG00000005621	FUBP1	100	71.519	Chinchilla_lanigera
ENSHCOG00000000910	fubp1	70	74.522	ENSCSAG00000001402	FUBP1	100	68.256	Chlorocebus_sabaeus
ENSHCOG00000000910	fubp1	70	74.522	ENSCHOG00000008177	FUBP1	98	68.358	Choloepus_hoffmanni
ENSHCOG00000000910	fubp1	70	76.356	ENSCGRG00001007103	Fubp1	100	68.759	Cricetulus_griseus_chok1gshd
ENSHCOG00000000910	fubp1	66	76.334	ENSCGRG00000003372	Fubp1	100	68.454	Cricetulus_griseus_crigri
ENSHCOG00000000910	fubp1	100	91.473	ENSCSEG00000021412	fubp1	98	91.163	Cynoglossus_semilaevis
ENSHCOG00000000910	fubp1	99	90.868	ENSCVAG00000014487	fubp1	99	89.671	Cyprinodon_variegatus
ENSHCOG00000000910	fubp1	100	81.022	ENSDARG00000029248	fubp1	100	82.482	Danio_rerio
ENSHCOG00000000910	fubp1	83	50.575	ENSDNOG00000034565	-	84	46.943	Dasypus_novemcinctus
ENSHCOG00000000910	fubp1	70	74.735	ENSDORG00000016534	Fubp1	98	68.358	Dipodomys_ordii
ENSHCOG00000000910	fubp1	77	73.654	ENSETEG00000000948	-	58	74.221	Echinops_telfairi
ENSHCOG00000000910	fubp1	88	45.533	ENSEBUG00000016143	fubp1	64	58.571	Eptatretus_burgeri
ENSHCOG00000000910	fubp1	72	83.557	ENSEEUG00000001287	FUBP1	87	69.168	Erinaceus_europaeus
ENSHCOG00000000910	fubp1	100	83.282	ENSELUG00000007990	fubp1	100	83.604	Esox_lucius
ENSHCOG00000000910	fubp1	70	75.431	ENSFALG00000005768	FUBP1	97	69.033	Ficedula_albicollis
ENSHCOG00000000910	fubp1	70	74.522	ENSFDAG00000014210	FUBP1	100	69.595	Fukomys_damarensis
ENSHCOG00000000910	fubp1	100	91.343	ENSFHEG00000005230	fubp1	100	90.543	Fundulus_heteroclitus
ENSHCOG00000000910	fubp1	100	82.362	ENSGMOG00000003370	fubp1	100	81.874	Gadus_morhua
ENSHCOG00000000910	fubp1	70	75.862	ENSGALG00000008939	FUBP1	100	69.578	Gallus_gallus
ENSHCOG00000000910	fubp1	100	92.868	ENSGAFG00000020972	fubp1	100	92.403	Gambusia_affinis
ENSHCOG00000000910	fubp1	100	87.939	ENSGACG00000016563	fubp1	100	86.718	Gasterosteus_aculeatus
ENSHCOG00000000910	fubp1	100	91.493	ENSHBUG00000009835	fubp1	100	91.194	Haplochromis_burtoni
ENSHCOG00000000910	fubp1	72	69.811	ENSHGLG00000002808	-	100	61.699	Heterocephalus_glaber_female
ENSHCOG00000000910	fubp1	70	74.735	ENSHGLG00000008415	-	100	71.519	Heterocephalus_glaber_female
ENSHCOG00000000910	fubp1	70	74.735	ENSHGLG00100003417	-	100	67.953	Heterocephalus_glaber_male
ENSHCOG00000000910	fubp1	72	70.613	ENSHGLG00100001414	-	100	62.444	Heterocephalus_glaber_male
ENSHCOG00000000910	fubp1	100	80.769	ENSIPUG00000009896	fubp1	100	82.840	Ictalurus_punctatus
ENSHCOG00000000910	fubp1	70	75.217	ENSSTOG00000014312	FUBP1	100	68.405	Ictidomys_tridecemlineatus
ENSHCOG00000000910	fubp1	70	75.271	ENSJJAG00000020069	Fubp1	100	69.595	Jaculus_jaculus
ENSHCOG00000000910	fubp1	100	90.015	ENSKMAG00000018897	fubp1	100	89.568	Kryptolebias_marmoratus
ENSHCOG00000000910	fubp1	99	92.889	ENSLBEG00000012700	fubp1	97	91.852	Labrus_bergylta
ENSHCOG00000000910	fubp1	97	79.671	ENSLOCG00000003745	fubp1	99	78.717	Lepisosteus_oculatus
ENSHCOG00000000910	fubp1	70	74.113	ENSLAFG00000003273	FUBP1	99	70.745	Loxodonta_africana
ENSHCOG00000000910	fubp1	70	74.893	ENSMFAG00000031825	FUBP1	100	68.468	Macaca_fascicularis
ENSHCOG00000000910	fubp1	70	75.000	ENSMMUG00000002899	FUBP1	100	68.256	Macaca_mulatta
ENSHCOG00000000910	fubp1	70	74.522	ENSMNEG00000045212	FUBP1	100	68.256	Macaca_nemestrina
ENSHCOG00000000910	fubp1	99	94.012	ENSMAMG00000007489	fubp1	99	93.413	Mastacembelus_armatus
ENSHCOG00000000910	fubp1	100	91.783	ENSMZEG00005024298	fubp1	100	91.045	Maylandia_zebra
ENSHCOG00000000910	fubp1	66	76.761	ENSMGAG00000009424	FUBP1	100	69.489	Meleagris_gallopavo
ENSHCOG00000000910	fubp1	70	74.947	ENSMAUG00000016428	Fubp1	98	70.270	Mesocricetus_auratus
ENSHCOG00000000910	fubp1	70	75.375	ENSMOCG00000014751	Fubp1	100	68.636	Microtus_ochrogaster
ENSHCOG00000000910	fubp1	86	90.991	ENSMMOG00000019463	fubp1	99	89.711	Mola_mola
ENSHCOG00000000910	fubp1	68	68.627	ENSMODG00000020804	FUBP1	100	63.470	Monodelphis_domestica
ENSHCOG00000000910	fubp1	100	91.343	ENSMALG00000015173	fubp1	100	90.448	Monopterus_albus
ENSHCOG00000000910	fubp1	70	75.758	MGP_CAROLIEiJ_G0025740	Fubp1	99	72.812	Mus_caroli
ENSHCOG00000000910	fubp1	70	75.541	ENSMUSG00000028034	Fubp1	99	72.626	Mus_musculus
ENSHCOG00000000910	fubp1	70	75.594	MGP_PahariEiJ_G0027191	Fubp1	99	72.677	Mus_pahari
ENSHCOG00000000910	fubp1	70	75.758	MGP_SPRETEiJ_G0026693	Fubp1	99	72.812	Mus_spretus
ENSHCOG00000000910	fubp1	70	73.347	ENSMLUG00000014802	FUBP1	100	67.201	Myotis_lucifugus
ENSHCOG00000000910	fubp1	70	72.532	ENSNGAG00000014302	Fubp1	98	69.595	Nannospalax_galili
ENSHCOG00000000910	fubp1	100	86.977	ENSNBRG00000015099	fubp1	100	85.891	Neolamprologus_brichardi
ENSHCOG00000000910	fubp1	70	71.581	ENSNLEG00000009772	FUBP1	100	66.667	Nomascus_leucogenys
ENSHCOG00000000910	fubp1	69	86.792	ENSOPRG00000001175	FUBP1	98	57.784	Ochotona_princeps
ENSHCOG00000000910	fubp1	99	52.542	ENSODEG00000003657	-	99	50.232	Octodon_degus
ENSHCOG00000000910	fubp1	70	74.735	ENSODEG00000002600	-	100	69.595	Octodon_degus
ENSHCOG00000000910	fubp1	99	91.467	ENSONIG00000018381	fubp1	99	90.278	Oreochromis_niloticus
ENSHCOG00000000910	fubp1	60	78.788	ENSOANG00000009777	FUBP1	100	69.316	Ornithorhynchus_anatinus
ENSHCOG00000000910	fubp1	99	86.470	ENSORLG00000003540	fubp1	99	84.759	Oryzias_latipes
ENSHCOG00000000910	fubp1	100	90.179	ENSORLG00020005908	fubp1	96	90.476	Oryzias_latipes_hni
ENSHCOG00000000910	fubp1	100	90.936	ENSORLG00015008779	fubp1	100	90.432	Oryzias_latipes_hsok
ENSHCOG00000000910	fubp1	100	90.164	ENSOMEG00000021943	fubp1	97	89.866	Oryzias_melastigma
ENSHCOG00000000910	fubp1	70	73.196	ENSOGAG00000014233	FUBP1	100	67.394	Otolemur_garnettii
ENSHCOG00000000910	fubp1	70	75.107	ENSOARG00000013259	FUBP1	100	69.723	Ovis_aries
ENSHCOG00000000910	fubp1	70	74.735	ENSPPRG00000000413	FUBP1	100	68.405	Panthera_pardus
ENSHCOG00000000910	fubp1	70	74.735	ENSPTIG00000019450	FUBP1	100	68.405	Panthera_tigris_altaica
ENSHCOG00000000910	fubp1	67	75.982	ENSPSIG00000012965	FUBP1	100	69.085	Pelodiscus_sinensis
ENSHCOG00000000910	fubp1	99	81.040	ENSPMGG00000009060	fubp1	99	80.581	Periophthalmus_magnuspinnatus
ENSHCOG00000000910	fubp1	70	75.536	ENSPEMG00000021802	Fubp1	100	69.595	Peromyscus_maniculatus_bairdii
ENSHCOG00000000910	fubp1	63	57.741	ENSPMAG00000001644	-	92	57.741	Petromyzon_marinus
ENSHCOG00000000910	fubp1	100	91.493	ENSPFOG00000000238	fubp1	100	90.299	Poecilia_formosa
ENSHCOG00000000910	fubp1	100	88.217	ENSPLAG00000021170	fubp1	100	88.060	Poecilia_latipinna
ENSHCOG00000000910	fubp1	99	86.265	ENSPMEG00000004747	fubp1	99	91.667	Poecilia_mexicana
ENSHCOG00000000910	fubp1	100	91.343	ENSPREG00000017911	fubp1	100	90.149	Poecilia_reticulata
ENSHCOG00000000910	fubp1	72	74.423	ENSPPYG00000001219	-	68	75.216	Pongo_abelii
ENSHCOG00000000910	fubp1	70	74.681	ENSPCAG00000012617	FUBP1	98	68.161	Procavia_capensis
ENSHCOG00000000910	fubp1	92	72.961	ENSPCOG00000024974	FUBP1	100	68.405	Propithecus_coquereli
ENSHCOG00000000910	fubp1	70	69.002	ENSPVAG00000014637	FUBP1	98	64.478	Pteropus_vampyrus
ENSHCOG00000000910	fubp1	100	91.783	ENSPNYG00000004552	fubp1	100	91.045	Pundamilia_nyererei
ENSHCOG00000000910	fubp1	100	84.593	ENSPNAG00000016207	fubp1	100	84.889	Pygocentrus_nattereri
ENSHCOG00000000910	fubp1	70	75.758	ENSRNOG00000043370	Fubp1	100	68.722	Rattus_norvegicus
ENSHCOG00000000910	fubp1	70	74.522	ENSRBIG00000042950	FUBP1	100	68.256	Rhinopithecus_bieti
ENSHCOG00000000910	fubp1	70	74.522	ENSRROG00000043534	FUBP1	100	68.256	Rhinopithecus_roxellana
ENSHCOG00000000910	fubp1	70	74.735	ENSSBOG00000027299	FUBP1	98	71.587	Saimiri_boliviensis_boliviensis
ENSHCOG00000000910	fubp1	66	75.172	ENSSHAG00000005367	FUBP1	99	71.403	Sarcophilus_harrisii
ENSHCOG00000000910	fubp1	99	82.186	ENSSFOG00015010213	fubp1	99	81.287	Scleropages_formosus
ENSHCOG00000000910	fubp1	100	85.423	ENSSMAG00000012029	fubp1	98	85.277	Scophthalmus_maximus
ENSHCOG00000000910	fubp1	100	95.672	ENSSDUG00000007383	fubp1	98	95.672	Seriola_dumerili
ENSHCOG00000000910	fubp1	100	95.672	ENSSLDG00000022863	fubp1	98	95.672	Seriola_lalandi_dorsalis
ENSHCOG00000000910	fubp1	84	86.957	ENSSARG00000011730	FUBP1	56	87.209	Sorex_araneus
ENSHCOG00000000910	fubp1	100	65.621	ENSSPUG00000008389	FUBP1	100	66.906	Sphenodon_punctatus
ENSHCOG00000000910	fubp1	100	91.940	ENSSPAG00000010161	fubp1	100	91.642	Stegastes_partitus
ENSHCOG00000000910	fubp1	66	75.926	ENSTGUG00000006841	FUBP1	100	68.730	Taeniopygia_guttata
ENSHCOG00000000910	fubp1	100	85.222	ENSTRUG00000004615	fubp1	100	85.694	Takifugu_rubripes
ENSHCOG00000000910	fubp1	50	94.558	ENSTNIG00000019815	-	87	94.558	Tetraodon_nigroviridis
ENSHCOG00000000910	fubp1	79	84.118	ENSTBEG00000017333	FUBP1	62	83.529	Tupaia_belangeri
ENSHCOG00000000910	fubp1	70	74.735	ENSTTRG00000000096	FUBP1	98	68.209	Tursiops_truncatus
ENSHCOG00000000910	fubp1	70	74.735	ENSVPAG00000004709	FUBP1	99	68.358	Vicugna_pacos
ENSHCOG00000000910	fubp1	100	80.923	ENSXCOG00000019354	fubp1	100	78.648	Xiphophorus_couchianus
ENSHCOG00000000910	fubp1	97	86.730	ENSXMAG00000007168	fubp1	99	91.340	Xiphophorus_maculatus