EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000918 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 7492 bases
Position: chrKV879715.1:237272-244763
Accession: 109520355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000158	La	PF05383.17	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014243	-	3427	XM_019877501	ENSHCOP00000000158	698 (aa)	XP_019733060	-

Gene Model

Click here to download ENSHCOG00000000918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000918	larp1b	83	67.079	ENSHCOG00000010786	larp1	62	65.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000918	larp1b	96	59.915	ENSG00000138709	LARP1B	76	59.348	Homo_sapiens
ENSHCOG00000000918	larp1b	96	82.006	ENSAPOG00000020101	larp1b	69	79.635	Acanthochromis_polyacanthus
ENSHCOG00000000918	larp1b	51	58.774	ENSAMEG00000002748	LARP1B	64	57.939	Ailuropoda_melanoleuca
ENSHCOG00000000918	larp1b	96	81.471	ENSACIG00000023890	larp1b	66	81.525	Amphilophus_citrinellus
ENSHCOG00000000918	larp1b	85	81.063	ENSAOCG00000014268	larp1b	66	81.063	Amphiprion_ocellaris
ENSHCOG00000000918	larp1b	96	82.891	ENSAPEG00000004126	larp1b	68	80.170	Amphiprion_percula
ENSHCOG00000000918	larp1b	96	82.301	ENSATEG00000017849	larp1b	70	79.050	Anabas_testudineus
ENSHCOG00000000918	larp1b	95	61.071	ENSAPLG00000010129	LARP1B	75	60.347	Anas_platyrhynchos
ENSHCOG00000000918	larp1b	90	64.000	ENSACAG00000011338	LARP1B	66	63.231	Anolis_carolinensis
ENSHCOG00000000918	larp1b	77	54.450	ENSANAG00000034618	LARP1B	69	53.356	Aotus_nancymaae
ENSHCOG00000000918	larp1b	95	81.073	ENSACLG00000011948	larp1b	62	81.065	Astatotilapia_calliptera
ENSHCOG00000000918	larp1b	97	62.853	ENSAMXG00000006805	larp1b	65	64.407	Astyanax_mexicanus
ENSHCOG00000000918	larp1b	96	62.193	ENSBTAG00000012135	LARP1B	67	61.472	Bos_taurus
ENSHCOG00000000918	larp1b	96	60.462	ENSCJAG00000003338	LARP1B	76	60.856	Callithrix_jacchus
ENSHCOG00000000918	larp1b	95	63.964	ENSCAFG00000003831	LARP1B	79	63.213	Canis_familiaris
ENSHCOG00000000918	larp1b	96	62.139	ENSCAFG00020018899	LARP1B	74	61.416	Canis_lupus_dingo
ENSHCOG00000000918	larp1b	96	60.969	ENSCHIG00000023144	LARP1B	75	60.256	Capra_hircus
ENSHCOG00000000918	larp1b	97	59.749	ENSCCAG00000021948	LARP1B	76	59.379	Cebus_capucinus
ENSHCOG00000000918	larp1b	96	59.291	ENSCATG00000013541	LARP1B	75	58.582	Cercocebus_atys
ENSHCOG00000000918	larp1b	96	60.482	ENSCSAG00000003582	LARP1B	76	60.057	Chlorocebus_sabaeus
ENSHCOG00000000918	larp1b	96	57.571	ENSCHOG00000005354	LARP1B	75	57.143	Choloepus_hoffmanni
ENSHCOG00000000918	larp1b	99	60.280	ENSCPBG00000017480	LARP1B	67	59.972	Chrysemys_picta_bellii
ENSHCOG00000000918	larp1b	96	60.597	ENSCANG00000026958	LARP1B	78	60.028	Colobus_angolensis_palliatus
ENSHCOG00000000918	larp1b	95	80.861	ENSCSEG00000013519	larp1b	63	79.395	Cynoglossus_semilaevis
ENSHCOG00000000918	larp1b	96	80.673	ENSCVAG00000005046	larp1b	69	77.978	Cyprinodon_variegatus
ENSHCOG00000000918	larp1b	96	68.143	ENSDARG00000061169	larp1b	64	69.429	Danio_rerio
ENSHCOG00000000918	larp1b	92	53.166	ENSETEG00000012497	LARP1B	73	52.430	Echinops_telfairi
ENSHCOG00000000918	larp1b	91	53.352	ENSEBUG00000003668	larp1b	70	53.212	Eptatretus_burgeri
ENSHCOG00000000918	larp1b	99	60.224	ENSEASG00005018106	LARP1B	81	59.524	Equus_asinus_asinus
ENSHCOG00000000918	larp1b	99	60.534	ENSECAG00000001088	LARP1B	63	59.831	Equus_caballus
ENSHCOG00000000918	larp1b	85	64.830	ENSELUG00000023774	larp1b	69	65.154	Esox_lucius
ENSHCOG00000000918	larp1b	96	60.198	ENSFALG00000008098	LARP1B	75	60.198	Ficedula_albicollis
ENSHCOG00000000918	larp1b	97	80.932	ENSFHEG00000010264	larp1b	64	80.932	Fundulus_heteroclitus
ENSHCOG00000000918	larp1b	92	70.847	ENSGMOG00000005207	larp1b	66	61.693	Gadus_morhua
ENSHCOG00000000918	larp1b	100	59.444	ENSGALG00000010207	LARP1B	69	58.750	Gallus_gallus
ENSHCOG00000000918	larp1b	97	80.029	ENSGAFG00000012012	larp1b	77	80.116	Gambusia_affinis
ENSHCOG00000000918	larp1b	99	73.800	ENSGACG00000004609	larp1b	67	75.103	Gasterosteus_aculeatus
ENSHCOG00000000918	larp1b	99	60.924	ENSGAGG00000017209	LARP1B	64	62.229	Gopherus_agassizii
ENSHCOG00000000918	larp1b	96	59.632	ENSGGOG00000015900	LARP1B	76	59.065	Gorilla_gorilla
ENSHCOG00000000918	larp1b	95	81.045	ENSHBUG00000009730	larp1b	65	81.037	Haplochromis_burtoni
ENSHCOG00000000918	larp1b	97	68.608	ENSIPUG00000012138	larp1b	65	67.614	Ictalurus_punctatus
ENSHCOG00000000918	larp1b	99	77.021	ENSKMAG00000011589	larp1b	71	76.738	Kryptolebias_marmoratus
ENSHCOG00000000918	larp1b	96	81.241	ENSLBEG00000005655	larp1b	66	81.388	Labrus_bergylta
ENSHCOG00000000918	larp1b	96	65.832	ENSLACG00000015247	LARP1B	62	65.685	Latimeria_chalumnae
ENSHCOG00000000918	larp1b	96	67.379	ENSLOCG00000010684	larp1b	69	66.952	Lepisosteus_oculatus
ENSHCOG00000000918	larp1b	96	60.426	ENSMFAG00000002218	LARP1B	76	59.716	Macaca_fascicularis
ENSHCOG00000000918	larp1b	96	60.567	ENSMMUG00000021347	LARP1B	76	59.858	Macaca_mulatta
ENSHCOG00000000918	larp1b	93	58.952	ENSMNEG00000030406	LARP1B	81	58.224	Macaca_nemestrina
ENSHCOG00000000918	larp1b	96	60.567	ENSMLEG00000009306	LARP1B	77	59.858	Mandrillus_leucophaeus
ENSHCOG00000000918	larp1b	99	79.494	ENSMAMG00000000081	larp1b	71	79.494	Mastacembelus_armatus
ENSHCOG00000000918	larp1b	95	80.271	ENSMZEG00005002545	larp1b	90	77.652	Maylandia_zebra
ENSHCOG00000000918	larp1b	92	57.949	ENSMGAG00000004809	LARP1B	74	57.504	Meleagris_gallopavo
ENSHCOG00000000918	larp1b	96	62.899	ENSMICG00000036111	LARP1B	75	62.174	Microcebus_murinus
ENSHCOG00000000918	larp1b	97	62.219	ENSMODG00000012300	LARP1B	62	61.625	Monodelphis_domestica
ENSHCOG00000000918	larp1b	99	77.374	ENSMALG00000003638	larp1b	70	77.159	Monopterus_albus
ENSHCOG00000000918	larp1b	95	62.336	ENSMPUG00000017365	LARP1B	61	61.304	Mustela_putorius_furo
ENSHCOG00000000918	larp1b	95	61.239	ENSMLUG00000010229	LARP1B	74	60.519	Myotis_lucifugus
ENSHCOG00000000918	larp1b	95	73.684	ENSNBRG00000023846	larp1b	72	71.469	Neolamprologus_brichardi
ENSHCOG00000000918	larp1b	96	59.830	ENSNLEG00000013819	LARP1B	76	59.264	Nomascus_leucogenys
ENSHCOG00000000918	larp1b	93	56.975	ENSMEUG00000010308	LARP1B	74	56.388	Notamacropus_eugenii
ENSHCOG00000000918	larp1b	87	67.143	ENSOPRG00000005478	LARP1B	78	51.105	Ochotona_princeps
ENSHCOG00000000918	larp1b	95	77.650	ENSONIG00000012386	larp1b	72	77.525	Oreochromis_niloticus
ENSHCOG00000000918	larp1b	97	59.143	ENSOCUG00000013330	LARP1B	75	59.000	Oryctolagus_cuniculus
ENSHCOG00000000918	larp1b	97	79.265	ENSORLG00000017954	larp1b	69	76.371	Oryzias_latipes
ENSHCOG00000000918	larp1b	99	77.841	ENSORLG00020013081	larp1b	65	76.653	Oryzias_latipes_hni
ENSHCOG00000000918	larp1b	99	77.337	ENSORLG00015009580	larp1b	69	76.231	Oryzias_latipes_hsok
ENSHCOG00000000918	larp1b	96	79.111	ENSOMEG00000004210	larp1b	70	75.791	Oryzias_melastigma
ENSHCOG00000000918	larp1b	94	63.623	ENSOGAG00000005771	LARP1B	75	62.874	Otolemur_garnettii
ENSHCOG00000000918	larp1b	95	61.638	ENSOARG00000015300	LARP1B	76	60.284	Ovis_aries
ENSHCOG00000000918	larp1b	96	60.340	ENSPPAG00000030439	LARP1B	76	59.773	Pan_paniscus
ENSHCOG00000000918	larp1b	96	60.198	ENSPTRG00000016437	LARP1B	76	59.632	Pan_troglodytes
ENSHCOG00000000918	larp1b	96	60.567	ENSPANG00000012488	LARP1B	76	59.858	Papio_anubis
ENSHCOG00000000918	larp1b	97	58.120	ENSPKIG00000014360	larp1b	74	57.692	Paramormyrops_kingsleyae
ENSHCOG00000000918	larp1b	94	63.235	ENSPSIG00000012885	LARP1B	73	62.811	Pelodiscus_sinensis
ENSHCOG00000000918	larp1b	95	78.647	ENSPMGG00000007207	larp1b	80	77.744	Periophthalmus_magnuspinnatus
ENSHCOG00000000918	larp1b	92	55.733	ENSPMAG00000002700	larp1b	75	54.582	Petromyzon_marinus
ENSHCOG00000000918	larp1b	80	76.562	ENSPCIG00000026516	LARP1B	91	62.049	Phascolarctos_cinereus
ENSHCOG00000000918	larp1b	96	79.345	ENSPFOG00000019519	larp1b	63	79.630	Poecilia_formosa
ENSHCOG00000000918	larp1b	96	81.471	ENSPLAG00000007115	larp1b	62	81.525	Poecilia_latipinna
ENSHCOG00000000918	larp1b	96	81.912	ENSPMEG00000001224	larp1b	65	82.111	Poecilia_mexicana
ENSHCOG00000000918	larp1b	96	58.865	ENSPCAG00000007546	LARP1B	76	58.298	Procavia_capensis
ENSHCOG00000000918	larp1b	82	66.942	ENSPCOG00000021874	LARP1B	72	66.942	Propithecus_coquereli
ENSHCOG00000000918	larp1b	96	58.333	ENSPVAG00000005373	LARP1B	76	57.615	Pteropus_vampyrus
ENSHCOG00000000918	larp1b	95	79.032	ENSPNYG00000017357	larp1b	91	76.414	Pundamilia_nyererei
ENSHCOG00000000918	larp1b	99	65.969	ENSPNAG00000008823	larp1b	68	66.620	Pygocentrus_nattereri
ENSHCOG00000000918	larp1b	96	60.284	ENSRROG00000030771	LARP1B	76	59.716	Rhinopithecus_roxellana
ENSHCOG00000000918	larp1b	64	57.054	ENSSHAG00000014474	LARP1B	70	56.695	Sarcophilus_harrisii
ENSHCOG00000000918	larp1b	95	81.185	ENSSMAG00000006347	larp1b	75	76.616	Scophthalmus_maximus
ENSHCOG00000000918	larp1b	95	83.183	ENSSDUG00000004182	larp1b	65	83.010	Seriola_dumerili
ENSHCOG00000000918	larp1b	95	77.861	ENSSLDG00000014613	larp1b	67	77.130	Seriola_lalandi_dorsalis
ENSHCOG00000000918	larp1b	96	62.150	ENSSPUG00000011837	LARP1B	77	61.561	Sphenodon_punctatus
ENSHCOG00000000918	larp1b	96	82.912	ENSSPAG00000017772	larp1b	66	79.915	Stegastes_partitus
ENSHCOG00000000918	larp1b	96	60.951	ENSSSCG00000034280	LARP1B	65	77.273	Sus_scrofa
ENSHCOG00000000918	larp1b	95	62.631	ENSTGUG00000002098	-	79	62.033	Taeniopygia_guttata
ENSHCOG00000000918	larp1b	97	79.795	ENSTRUG00000005612	larp1b	66	79.795	Takifugu_rubripes
ENSHCOG00000000918	larp1b	95	79.821	ENSTNIG00000012398	larp1b	73	79.970	Tetraodon_nigroviridis
ENSHCOG00000000918	larp1b	91	51.391	ENSTBEG00000004177	LARP1B	74	50.575	Tupaia_belangeri
ENSHCOG00000000918	larp1b	96	58.239	ENSTTRG00000012984	LARP1B	76	57.528	Tursiops_truncatus
ENSHCOG00000000918	larp1b	96	61.884	ENSUMAG00000007373	LARP1B	74	61.159	Ursus_maritimus
ENSHCOG00000000918	larp1b	96	54.108	ENSVPAG00000007223	LARP1B	77	53.683	Vicugna_pacos
ENSHCOG00000000918	larp1b	96	62.319	ENSVVUG00000011307	LARP1B	77	60.831	Vulpes_vulpes
ENSHCOG00000000918	larp1b	96	57.308	ENSXETG00000022512	larp1b	68	57.019	Xenopus_tropicalis
ENSHCOG00000000918	larp1b	92	76.560	ENSXCOG00000004435	larp1b	69	76.667	Xiphophorus_couchianus
ENSHCOG00000000918	larp1b	97	80.904	ENSXMAG00000008150	larp1b	66	78.814	Xiphophorus_maculatus