EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000937 (Gene tree)
Gene ID: 109513904
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 86889 bases
Position: chrKV879870.1:2389171-2476059
Accession: 109513904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000162	ResIII	PF04851.15	1e-06	1	1
ENSHCOP00000017255	ResIII	PF04851.15	1e-06	1	1
ENSHCOP00000017264	ResIII	PF04851.15	1.2e-06	1	1
ENSHCOP00000000151	ResIII	PF04851.15	1.3e-06	1	1
ENSHCOP00000000162	BRK	PF07533.16	5e-32	1	2
ENSHCOP00000000162	BRK	PF07533.16	5e-32	2	2
ENSHCOP00000017255	BRK	PF07533.16	5.2e-32	1	2
ENSHCOP00000017255	BRK	PF07533.16	5.2e-32	2	2
ENSHCOP00000000151	BRK	PF07533.16	7.4e-32	1	2
ENSHCOP00000000151	BRK	PF07533.16	7.4e-32	2	2
ENSHCOP00000017264	BRK	PF07533.16	8.1e-32	1	2
ENSHCOP00000017264	BRK	PF07533.16	8.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014257	-	9270	XM_019866617	ENSHCOP00000017255	2458 (aa)	XP_019722176	UPI00094EB430
ENSHCOT00000014247	-	9331	XM_019866618	ENSHCOP00000000162	2430 (aa)	XP_019722177	UPI00094EB775
ENSHCOT00000014267	-	8493	-	ENSHCOP00000000151	2830 (aa)	-	-
ENSHCOT00000014238	-	10815	XM_019866612	ENSHCOP00000017264	2943 (aa)	XP_019722171	UPI00094E273D

Gene Model

Click here to download ENSHCOG00000000937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000937	chd9	64	61.204	ENSHCOG00000016611	chd8	76	62.075
ENSHCOG00000000937	chd9	80	70.527	ENSHCOG00000014380	chd7	86	67.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000937	chd9	97	68.176	ENSG00000177200	CHD9	97	67.349	Homo_sapiens
ENSHCOG00000000937	chd9	99	83.527	ENSAPOG00000023034	chd9	96	84.537	Acanthochromis_polyacanthus
ENSHCOG00000000937	chd9	69	73.451	ENSAMEG00000016232	CHD9	90	66.733	Ailuropoda_melanoleuca
ENSHCOG00000000937	chd9	96	79.798	ENSACIG00000004097	chd9	95	75.398	Amphilophus_citrinellus
ENSHCOG00000000937	chd9	99	83.713	ENSAOCG00000005487	chd9	96	84.619	Amphiprion_ocellaris
ENSHCOG00000000937	chd9	99	83.713	ENSAPEG00000009859	chd9	96	84.619	Amphiprion_percula
ENSHCOG00000000937	chd9	97	85.027	ENSATEG00000002748	chd9	97	80.230	Anabas_testudineus
ENSHCOG00000000937	chd9	99	67.272	ENSAPLG00000002826	CHD9	90	66.747	Anas_platyrhynchos
ENSHCOG00000000937	chd9	69	74.157	ENSACAG00000016150	CHD9	91	65.365	Anolis_carolinensis
ENSHCOG00000000937	chd9	69	73.329	ENSANAG00000015630	CHD9	91	69.204	Aotus_nancymaae
ENSHCOG00000000937	chd9	97	81.162	ENSACLG00000016899	chd9	97	75.462	Astatotilapia_calliptera
ENSHCOG00000000937	chd9	99	74.179	ENSAMXG00000005652	chd9	97	75.367	Astyanax_mexicanus
ENSHCOG00000000937	chd9	69	73.302	ENSBTAG00000002287	CHD9	89	66.186	Bos_taurus
ENSHCOG00000000937	chd9	69	73.211	ENSCJAG00000001573	CHD9	91	68.858	Callithrix_jacchus
ENSHCOG00000000937	chd9	69	73.420	ENSCAFG00000009699	CHD9	90	66.440	Canis_familiaris
ENSHCOG00000000937	chd9	69	73.420	ENSCAFG00020002879	CHD9	91	69.204	Canis_lupus_dingo
ENSHCOG00000000937	chd9	85	68.090	ENSCHIG00000021000	CHD9	66	69.029	Capra_hircus
ENSHCOG00000000937	chd9	69	73.286	ENSTSYG00000007693	CHD9	91	69.896	Carlito_syrichta
ENSHCOG00000000937	chd9	82	58.020	ENSCAPG00000011604	CHD9	78	60.736	Cavia_aperea
ENSHCOG00000000937	chd9	69	68.853	ENSCPOG00000036544	CHD9	89	63.200	Cavia_porcellus
ENSHCOG00000000937	chd9	69	73.270	ENSCCAG00000036178	CHD9	91	69.204	Cebus_capucinus
ENSHCOG00000000937	chd9	69	73.507	ENSCATG00000036753	CHD9	91	68.259	Cercocebus_atys
ENSHCOG00000000937	chd9	69	73.491	ENSCLAG00000007137	CHD9	94	81.189	Chinchilla_lanigera
ENSHCOG00000000937	chd9	67	74.848	ENSCSAG00000005311	CHD9	90	65.712	Chlorocebus_sabaeus
ENSHCOG00000000937	chd9	63	91.146	ENSCHOG00000003935	CHD9	64	91.099	Choloepus_hoffmanni
ENSHCOG00000000937	chd9	88	80.311	ENSCPBG00000012459	CHD9	88	76.560	Chrysemys_picta_bellii
ENSHCOG00000000937	chd9	69	73.329	ENSCANG00000030349	CHD9	91	68.858	Colobus_angolensis_palliatus
ENSHCOG00000000937	chd9	95	69.015	ENSCGRG00001016150	Chd9	97	60.227	Cricetulus_griseus_chok1gshd
ENSHCOG00000000937	chd9	95	69.015	ENSCGRG00000012850	Chd9	94	80.802	Cricetulus_griseus_crigri
ENSHCOG00000000937	chd9	96	82.419	ENSCSEG00000009209	chd9	96	81.217	Cynoglossus_semilaevis
ENSHCOG00000000937	chd9	96	82.085	ENSCVAG00000016195	chd9	97	74.473	Cyprinodon_variegatus
ENSHCOG00000000937	chd9	97	75.592	ENSDARG00000074498	chd9	97	75.502	Danio_rerio
ENSHCOG00000000937	chd9	66	74.631	ENSDNOG00000006045	CHD9	97	68.955	Dasypus_novemcinctus
ENSHCOG00000000937	chd9	80	68.482	ENSDORG00000008523	-	96	69.550	Dipodomys_ordii
ENSHCOG00000000937	chd9	59	90.476	ENSETEG00000009565	CHD9	76	90.476	Echinops_telfairi
ENSHCOG00000000937	chd9	85	76.381	ENSEASG00005014832	CHD9	96	76.890	Equus_asinus_asinus
ENSHCOG00000000937	chd9	67	74.879	ENSECAG00000011505	CHD9	90	66.439	Equus_caballus
ENSHCOG00000000937	chd9	79	83.425	ENSEEUG00000014515	CHD9	78	83.425	Erinaceus_europaeus
ENSHCOG00000000937	chd9	85	79.180	ENSELUG00000006031	chd9	94	79.231	Esox_lucius
ENSHCOG00000000937	chd9	69	73.597	ENSFCAG00000022534	CHD9	91	69.550	Felis_catus
ENSHCOG00000000937	chd9	97	68.620	ENSFALG00000013276	CHD9	97	67.470	Ficedula_albicollis
ENSHCOG00000000937	chd9	69	73.211	ENSFDAG00000021037	CHD9	90	65.797	Fukomys_damarensis
ENSHCOG00000000937	chd9	97	83.306	ENSFHEG00000006068	chd9	95	84.427	Fundulus_heteroclitus
ENSHCOG00000000937	chd9	83	84.631	ENSGMOG00000006040	chd9	83	84.553	Gadus_morhua
ENSHCOG00000000937	chd9	93	70.017	ENSGALG00000039178	CHD9	89	68.053	Gallus_gallus
ENSHCOG00000000937	chd9	97	82.001	ENSGAFG00000010014	chd9	96	82.225	Gambusia_affinis
ENSHCOG00000000937	chd9	95	80.771	ENSGACG00000016694	chd9	94	85.350	Gasterosteus_aculeatus
ENSHCOG00000000937	chd9	69	73.669	ENSGGOG00000014816	CHD9	91	68.858	Gorilla_gorilla
ENSHCOG00000000937	chd9	97	83.285	ENSHBUG00000023322	chd9	96	83.265	Haplochromis_burtoni
ENSHCOG00000000937	chd9	97	67.915	ENSHGLG00000014938	CHD9	94	80.825	Heterocephalus_glaber_female
ENSHCOG00000000937	chd9	99	76.505	ENSIPUG00000016448	chd9	98	79.094	Ictalurus_punctatus
ENSHCOG00000000937	chd9	67	74.924	ENSSTOG00000022273	CHD9	94	81.235	Ictidomys_tridecemlineatus
ENSHCOG00000000937	chd9	52	76.072	ENSJJAG00000015741	-	96	69.207	Jaculus_jaculus
ENSHCOG00000000937	chd9	97	82.684	ENSKMAG00000016784	chd9	96	82.752	Kryptolebias_marmoratus
ENSHCOG00000000937	chd9	97	83.511	ENSLBEG00000012077	chd9	96	83.135	Labrus_bergylta
ENSHCOG00000000937	chd9	95	65.048	ENSLACG00000005557	CHD9	97	57.815	Latimeria_chalumnae
ENSHCOG00000000937	chd9	97	74.389	ENSLOCG00000007225	chd9	97	74.012	Lepisosteus_oculatus
ENSHCOG00000000937	chd9	69	73.274	ENSLAFG00000015374	CHD9	90	66.212	Loxodonta_africana
ENSHCOG00000000937	chd9	92	69.478	ENSMFAG00000041354	CHD9	95	68.804	Macaca_fascicularis
ENSHCOG00000000937	chd9	69	73.507	ENSMMUG00000016310	CHD9	91	68.858	Macaca_mulatta
ENSHCOG00000000937	chd9	69	73.507	ENSMNEG00000031494	CHD9	91	66.996	Macaca_nemestrina
ENSHCOG00000000937	chd9	69	73.507	ENSMLEG00000043219	CHD9	91	68.858	Mandrillus_leucophaeus
ENSHCOG00000000937	chd9	97	84.660	ENSMAMG00000003909	chd9	97	79.401	Mastacembelus_armatus
ENSHCOG00000000937	chd9	97	84.029	ENSMZEG00005006581	chd9	96	83.599	Maylandia_zebra
ENSHCOG00000000937	chd9	97	64.372	ENSMGAG00000004642	CHD9	64	66.648	Meleagris_gallopavo
ENSHCOG00000000937	chd9	69	73.463	ENSMICG00000016679	CHD9	91	70.242	Microcebus_murinus
ENSHCOG00000000937	chd9	96	81.049	ENSMMOG00000016406	chd9	97	75.672	Mola_mola
ENSHCOG00000000937	chd9	96	81.292	ENSMALG00000013306	chd9	97	77.069	Monopterus_albus
ENSHCOG00000000937	chd9	97	68.186	MGP_CAROLIEiJ_G0031364	Chd9	90	66.572	Mus_caroli
ENSHCOG00000000937	chd9	95	67.706	ENSMUSG00000056608	Chd9	99	74.945	Mus_musculus
ENSHCOG00000000937	chd9	97	67.083	MGP_PahariEiJ_G0022964	Chd9	90	65.399	Mus_pahari
ENSHCOG00000000937	chd9	97	67.808	MGP_SPRETEiJ_G0032483	Chd9	97	60.208	Mus_spretus
ENSHCOG00000000937	chd9	69	73.597	ENSMPUG00000003285	CHD9	90	66.347	Mustela_putorius_furo
ENSHCOG00000000937	chd9	67	74.440	ENSMLUG00000004456	CHD9	90	65.756	Myotis_lucifugus
ENSHCOG00000000937	chd9	97	83.374	ENSNBRG00000009423	chd9	96	82.945	Neolamprologus_brichardi
ENSHCOG00000000937	chd9	69	73.448	ENSNLEG00000001026	CHD9	92	67.783	Nomascus_leucogenys
ENSHCOG00000000937	chd9	67	95.489	ENSMEUG00000008222	-	75	92.208	Notamacropus_eugenii
ENSHCOG00000000937	chd9	57	85.511	ENSOPRG00000011168	CHD9	71	85.511	Ochotona_princeps
ENSHCOG00000000937	chd9	97	67.816	ENSODEG00000004466	CHD9	90	65.690	Octodon_degus
ENSHCOG00000000937	chd9	96	84.213	ENSONIG00000002816	chd9	98	82.181	Oreochromis_niloticus
ENSHCOG00000000937	chd9	67	75.242	ENSOANG00000013401	CHD9	89	66.494	Ornithorhynchus_anatinus
ENSHCOG00000000937	chd9	97	68.091	ENSOCUG00000001016	CHD9	96	67.675	Oryctolagus_cuniculus
ENSHCOG00000000937	chd9	97	81.762	ENSORLG00000013810	chd9	96	81.047	Oryzias_latipes
ENSHCOG00000000937	chd9	96	78.987	ENSORLG00020020665	chd9	96	74.549	Oryzias_latipes_hni
ENSHCOG00000000937	chd9	98	81.944	ENSORLG00015019126	chd9	96	82.230	Oryzias_latipes_hsok
ENSHCOG00000000937	chd9	56	86.446	ENSOMEG00000015978	chd9	99	75.226	Oryzias_melastigma
ENSHCOG00000000937	chd9	97	67.870	ENSOGAG00000002110	CHD9	90	66.079	Otolemur_garnettii
ENSHCOG00000000937	chd9	69	73.113	ENSOARG00000017664	CHD9	89	66.147	Ovis_aries
ENSHCOG00000000937	chd9	67	73.939	ENSPPAG00000039388	-	95	69.453	Pan_paniscus
ENSHCOG00000000937	chd9	69	73.538	ENSPPRG00000004801	CHD9	91	69.204	Panthera_pardus
ENSHCOG00000000937	chd9	69	71.943	ENSPTIG00000021854	CHD9	90	65.294	Panthera_tigris_altaica
ENSHCOG00000000937	chd9	69	73.448	ENSPTRG00000008113	CHD9	91	68.858	Pan_troglodytes
ENSHCOG00000000937	chd9	69	73.448	ENSPANG00000019307	CHD9	97	67.185	Papio_anubis
ENSHCOG00000000937	chd9	99	67.664	ENSPKIG00000025401	-	97	64.181	Paramormyrops_kingsleyae
ENSHCOG00000000937	chd9	96	74.595	ENSPKIG00000021876	chd9	96	74.969	Paramormyrops_kingsleyae
ENSHCOG00000000937	chd9	58	74.929	ENSPSIG00000008099	CHD9	86	71.476	Pelodiscus_sinensis
ENSHCOG00000000937	chd9	62	68.712	ENSPMAG00000006035	-	85	69.816	Petromyzon_marinus
ENSHCOG00000000937	chd9	87	68.446	ENSPCIG00000017215	CHD9	98	71.787	Phascolarctos_cinereus
ENSHCOG00000000937	chd9	97	81.646	ENSPFOG00000015839	chd9	97	76.297	Poecilia_formosa
ENSHCOG00000000937	chd9	97	82.375	ENSPLAG00000011118	chd9	96	82.723	Poecilia_latipinna
ENSHCOG00000000937	chd9	97	80.256	ENSPMEG00000015106	chd9	96	74.898	Poecilia_mexicana
ENSHCOG00000000937	chd9	97	82.199	ENSPREG00000006473	chd9	96	82.143	Poecilia_reticulata
ENSHCOG00000000937	chd9	69	73.448	ENSPPYG00000007348	CHD9	89	65.447	Pongo_abelii
ENSHCOG00000000937	chd9	70	77.858	ENSPCAG00000007564	CHD9	74	79.063	Procavia_capensis
ENSHCOG00000000937	chd9	69	70.922	ENSPCOG00000028433	CHD9	91	69.204	Propithecus_coquereli
ENSHCOG00000000937	chd9	77	72.900	ENSPVAG00000015617	CHD9	86	65.994	Pteropus_vampyrus
ENSHCOG00000000937	chd9	97	84.392	ENSPNYG00000010947	chd9	96	83.961	Pundamilia_nyererei
ENSHCOG00000000937	chd9	98	75.617	ENSPNAG00000024141	chd9	97	75.917	Pygocentrus_nattereri
ENSHCOG00000000937	chd9	88	67.289	ENSRNOG00000049302	Chd9	85	72.340	Rattus_norvegicus
ENSHCOG00000000937	chd9	69	73.329	ENSRBIG00000035553	CHD9	95	68.918	Rhinopithecus_bieti
ENSHCOG00000000937	chd9	95	68.906	ENSRROG00000033278	CHD9	96	69.104	Rhinopithecus_roxellana
ENSHCOG00000000937	chd9	69	73.270	ENSSBOG00000030240	CHD9	91	68.858	Saimiri_boliviensis_boliviensis
ENSHCOG00000000937	chd9	99	66.547	ENSSHAG00000002719	CHD9	89	66.173	Sarcophilus_harrisii
ENSHCOG00000000937	chd9	97	75.092	ENSSFOG00015020209	chd9	97	74.876	Scleropages_formosus
ENSHCOG00000000937	chd9	99	71.177	ENSSFOG00015001327	chd9	96	72.179	Scleropages_formosus
ENSHCOG00000000937	chd9	97	84.342	ENSSMAG00000008953	chd9	96	83.926	Scophthalmus_maximus
ENSHCOG00000000937	chd9	97	84.323	ENSSDUG00000006139	chd9	96	84.124	Seriola_dumerili
ENSHCOG00000000937	chd9	97	84.685	ENSSLDG00000017818	chd9	96	84.200	Seriola_lalandi_dorsalis
ENSHCOG00000000937	chd9	65	75.931	ENSSARG00000010632	CHD9	85	68.391	Sorex_araneus
ENSHCOG00000000937	chd9	99	83.693	ENSSPAG00000021649	chd9	96	84.584	Stegastes_partitus
ENSHCOG00000000937	chd9	97	66.999	ENSSSCG00000033591	CHD9	67	69.827	Sus_scrofa
ENSHCOG00000000937	chd9	88	70.497	ENSTGUG00000007476	CHD9	99	61.393	Taeniopygia_guttata
ENSHCOG00000000937	chd9	99	79.871	ENSTRUG00000009125	chd9	97	75.018	Takifugu_rubripes
ENSHCOG00000000937	chd9	79	68.721	ENSTNIG00000003825	chd9	98	68.950	Tetraodon_nigroviridis
ENSHCOG00000000937	chd9	62	94.915	ENSTBEG00000016052	-	59	94.915	Tupaia_belangeri
ENSHCOG00000000937	chd9	83	74.545	ENSTTRG00000012674	CHD9	82	66.828	Tursiops_truncatus
ENSHCOG00000000937	chd9	76	86.047	ENSUMAG00000004043	CHD9	95	87.245	Ursus_maritimus
ENSHCOG00000000937	chd9	65	75.608	ENSVPAG00000001374	CHD9	89	67.148	Vicugna_pacos
ENSHCOG00000000937	chd9	69	73.361	ENSVVUG00000019435	CHD9	90	66.400	Vulpes_vulpes
ENSHCOG00000000937	chd9	95	67.483	ENSXETG00000000349	chd9	85	69.775	Xenopus_tropicalis
ENSHCOG00000000937	chd9	97	81.567	ENSXCOG00000012997	chd9	96	81.709	Xiphophorus_couchianus
ENSHCOG00000000937	chd9	97	82.575	ENSXMAG00000016192	chd9	96	83.178	Xiphophorus_maculatus