EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000954 (Gene tree)
Gene ID: 109532401
Gene Symbol: -
Alias: zgc:92772
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3390 bases
Position: chrKV880451.1:2926105-2929494
Accession: 109532401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000168	MMR_HSR1	PF01926.23	6.2e-07	1	1
ENSHCOP00000000157	MMR_HSR1	PF01926.23	1.2e-06	1	1
ENSHCOP00000000176	MMR_HSR1	PF01926.23	1.6e-06	1	1
ENSHCOP00000017263	MMR_HSR1	PF01926.23	1.8e-06	1	1
ENSHCOP00000000170	MMR_HSR1	PF01926.23	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014242	-	699	-	ENSHCOP00000000157	232 (aa)	-	-
ENSHCOT00000014224	-	633	-	ENSHCOP00000000176	210 (aa)	-	-
ENSHCOT00000014227	-	645	-	ENSHCOP00000000170	214 (aa)	-	-
ENSHCOT00000014230	-	657	XM_019897293	ENSHCOP00000000168	218 (aa)	XP_019752852	UPI00094E87E4
ENSHCOT00000014237	-	639	-	ENSHCOP00000017263	212 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000000954's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000954	-	77	52.695	ENSHCOG00000019224	rab14	78	52.695
ENSHCOG00000000954	-	74	39.130	ENSHCOG00000016322	RAB7A	78	39.877
ENSHCOG00000000954	-	79	39.205	ENSHCOG00000004086	rab9a	87	39.205
ENSHCOG00000000954	-	81	34.483	ENSHCOG00000013130	rab6bb	84	34.483
ENSHCOG00000000954	-	75	41.772	ENSHCOG00000001145	rab22a	83	42.236
ENSHCOG00000000954	-	97	33.486	ENSHCOG00000003569	rab33ba	95	32.314
ENSHCOG00000000954	-	81	41.143	ENSHCOG00000012376	rab12	77	40.212
ENSHCOG00000000954	-	91	45.000	ENSHCOG00000013180	-	99	41.860
ENSHCOG00000000954	-	94	32.353	ENSHCOG00000006550	-	95	32.353
ENSHCOG00000000954	-	77	35.583	ENSHCOG00000004404	rab41	80	35.714
ENSHCOG00000000954	-	96	45.933	ENSHCOG00000019468	rab1ba	99	45.933
ENSHCOG00000000954	-	87	30.693	ENSHCOG00000014711	rab6ba	91	30.693
ENSHCOG00000000954	-	100	91.743	ENSHCOG00000000985	-	100	91.743
ENSHCOG00000000954	-	78	46.784	ENSHCOG00000002217	rab18b	83	46.784
ENSHCOG00000000954	-	96	39.604	ENSHCOG00000006538	si:dkey-16l2.16	98	40.385
ENSHCOG00000000954	-	75	31.250	ENSHCOG00000018554	rasd4	77	31.056
ENSHCOG00000000954	-	80	40.351	ENSHCOG00000009133	zgc:101559	73	41.040
ENSHCOG00000000954	-	78	54.545	ENSHCOG00000014428	rab2a	99	47.642
ENSHCOG00000000954	-	56	30.075	ENSHCOG00000014829	-	65	30.075
ENSHCOG00000000954	-	100	94.954	ENSHCOG00000002423	rab11bb	100	94.954
ENSHCOG00000000954	-	69	35.417	ENSHCOG00000013919	rab23	79	34.969
ENSHCOG00000000954	-	79	45.977	ENSHCOG00000003981	RAB39B	82	45.977
ENSHCOG00000000954	-	94	37.619	ENSHCOG00000005024	rab9b	97	37.619
ENSHCOG00000000954	-	67	31.206	ENSHCOG00000010468	arl8bb	72	30.282
ENSHCOG00000000954	-	99	37.443	ENSHCOG00000005802	RAB9A	99	36.123
ENSHCOG00000000954	-	96	41.379	ENSHCOG00000020238	-	88	41.379
ENSHCOG00000000954	-	96	36.190	ENSHCOG00000015692	si:dkey-34d22.5	97	35.945
ENSHCOG00000000954	-	96	35.437	ENSHCOG00000004225	-	97	36.190
ENSHCOG00000000954	-	98	63.256	ENSHCOG00000013095	rab25a	99	63.256
ENSHCOG00000000954	-	70	41.290	ENSHCOG00000012834	-	66	41.401
ENSHCOG00000000954	-	80	47.368	ENSHCOG00000019732	-	84	46.629
ENSHCOG00000000954	-	76	53.012	ENSHCOG00000001137	rab1ab	99	45.327
ENSHCOG00000000954	-	76	53.012	ENSHCOG00000010023	-	99	45.933
ENSHCOG00000000954	-	100	86.697	ENSHCOG00000005652	rab11a	100	86.697
ENSHCOG00000000954	-	81	46.023	ENSHCOG00000007440	rab13	97	46.023
ENSHCOG00000000954	-	72	34.839	ENSHCOG00000011080	kras	87	35.928
ENSHCOG00000000954	-	78	31.638	ENSHCOG00000019709	rasl11a	71	31.638
ENSHCOG00000000954	-	70	40.523	ENSHCOG00000010707	rab30	83	40.523
ENSHCOG00000000954	-	80	37.356	ENSHCOG00000004726	rab33a	74	38.068
ENSHCOG00000000954	-	79	30.357	ENSHCOG00000003667	rhebl1	91	30.357
ENSHCOG00000000954	-	99	82.870	ENSHCOG00000000232	rab11al	99	82.870
ENSHCOG00000000954	-	79	30.952	ENSHCOG00000013807	rheb	91	30.952
ENSHCOG00000000954	-	75	32.099	ENSHCOG00000009757	ran	74	32.099
ENSHCOG00000000954	-	77	32.317	ENSHCOG00000018456	si:ch73-116o1.2	82	34.091
ENSHCOG00000000954	-	75	49.367	ENSHCOG00000004662	rab5c	73	47.853
ENSHCOG00000000954	-	94	39.024	ENSHCOG00000017123	-	93	39.024
ENSHCOG00000000954	-	98	30.660	ENSHCOG00000020527	rab34a	78	31.455
ENSHCOG00000000954	-	74	43.827	ENSHCOG00000017086	RAB15	76	43.827
ENSHCOG00000000954	-	99	62.264	ENSHCOG00000007187	rab25b	87	62.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000954	-	100	95.413	ENSAPOG00000023455	rab11bb	100	95.413	Acanthochromis_polyacanthus
ENSHCOG00000000954	-	100	83.486	ENSACIG00000019631	rab11bb	100	83.486	Amphilophus_citrinellus
ENSHCOG00000000954	-	100	96.789	ENSACIG00000024376	-	100	96.789	Amphilophus_citrinellus
ENSHCOG00000000954	-	100	95.413	ENSAOCG00000018239	rab11bb	100	95.413	Amphiprion_ocellaris
ENSHCOG00000000954	-	100	96.789	ENSAOCG00000018849	-	100	96.789	Amphiprion_ocellaris
ENSHCOG00000000954	-	100	95.413	ENSAPEG00000016590	rab11bb	100	95.413	Amphiprion_percula
ENSHCOG00000000954	-	100	97.248	ENSATEG00000023725	-	100	97.248	Anabas_testudineus
ENSHCOG00000000954	-	100	95.413	ENSATEG00000017696	rab11bb	100	95.413	Anabas_testudineus
ENSHCOG00000000954	-	99	93.750	ENSAPLG00000011046	-	96	94.737	Anas_platyrhynchos
ENSHCOG00000000954	-	100	96.789	ENSACLG00000005446	-	100	96.789	Astatotilapia_calliptera
ENSHCOG00000000954	-	100	95.413	ENSACLG00000007076	rab11bb	100	95.413	Astatotilapia_calliptera
ENSHCOG00000000954	-	100	95.872	ENSAMXG00000042655	rab11bb	100	95.872	Astyanax_mexicanus
ENSHCOG00000000954	-	100	94.954	ENSAMXG00000037623	-	100	94.954	Astyanax_mexicanus
ENSHCOG00000000954	-	100	94.495	ENSBTAG00000002475	RAB11B	100	94.495	Bos_taurus
ENSHCOG00000000954	-	99	93.720	ENSCHIG00000022426	-	92	94.146	Capra_hircus
ENSHCOG00000000954	-	100	94.495	ENSCATG00000029188	-	100	94.495	Cercocebus_atys
ENSHCOG00000000954	-	100	95.413	ENSCPBG00000017056	-	100	95.413	Chrysemys_picta_bellii
ENSHCOG00000000954	-	100	95.413	ENSCSEG00000012149	rab11bb	100	95.413	Cynoglossus_semilaevis
ENSHCOG00000000954	-	100	96.330	ENSCSEG00000007239	-	100	96.330	Cynoglossus_semilaevis
ENSHCOG00000000954	-	100	95.413	ENSCVAG00000017021	-	100	95.413	Cyprinodon_variegatus
ENSHCOG00000000954	-	100	96.789	ENSCVAG00000019751	-	100	96.789	Cyprinodon_variegatus
ENSHCOG00000000954	-	100	95.872	ENSCVAG00000019718	-	100	95.872	Cyprinodon_variegatus
ENSHCOG00000000954	-	100	94.495	ENSDARG00000090086	rab11bb	100	94.495	Danio_rerio
ENSHCOG00000000954	-	99	92.166	ENSETEG00000000905	-	99	92.166	Echinops_telfairi
ENSHCOG00000000954	-	98	93.659	ENSEASG00005003708	-	99	91.163	Equus_asinus_asinus
ENSHCOG00000000954	-	98	93.659	ENSECAG00000000716	RAB11B	99	91.163	Equus_caballus
ENSHCOG00000000954	-	100	95.872	ENSELUG00000020948	-	98	98.438	Esox_lucius
ENSHCOG00000000954	-	100	94.495	ENSELUG00000021148	rab11bb	100	94.495	Esox_lucius
ENSHCOG00000000954	-	100	95.872	ENSELUG00000000916	-	100	95.872	Esox_lucius
ENSHCOG00000000954	-	100	95.413	ENSFALG00000011828	-	100	95.413	Ficedula_albicollis
ENSHCOG00000000954	-	100	95.413	ENSFHEG00000018353	rab11bb	100	95.413	Fundulus_heteroclitus
ENSHCOG00000000954	-	100	97.248	ENSFHEG00000022676	-	100	97.248	Fundulus_heteroclitus
ENSHCOG00000000954	-	100	95.413	ENSGMOG00000009211	rab11bb	100	95.413	Gadus_morhua
ENSHCOG00000000954	-	99	93.519	ENSGMOG00000009668	-	99	93.519	Gadus_morhua
ENSHCOG00000000954	-	100	95.413	ENSGALG00000000613	RAB11B	100	95.413	Gallus_gallus
ENSHCOG00000000954	-	100	95.413	ENSGAFG00000007102	rab11bb	100	95.413	Gambusia_affinis
ENSHCOG00000000954	-	100	95.413	ENSGACG00000013297	-	99	95.413	Gasterosteus_aculeatus
ENSHCOG00000000954	-	100	94.954	ENSGACG00000015479	rab11bb	100	94.954	Gasterosteus_aculeatus
ENSHCOG00000000954	-	100	94.495	ENSGGOG00000014516	RAB11B	100	94.495	Gorilla_gorilla
ENSHCOG00000000954	-	100	96.789	ENSHBUG00000009947	-	100	96.789	Haplochromis_burtoni
ENSHCOG00000000954	-	100	95.413	ENSHBUG00000014777	rab11bb	100	95.413	Haplochromis_burtoni
ENSHCOG00000000954	-	100	95.413	ENSIPUG00000019927	rab11bb	100	95.413	Ictalurus_punctatus
ENSHCOG00000000954	-	100	94.954	ENSIPUG00000025100	rab11b	100	94.954	Ictalurus_punctatus
ENSHCOG00000000954	-	100	96.789	ENSKMAG00000006170	-	100	96.789	Kryptolebias_marmoratus
ENSHCOG00000000954	-	100	95.413	ENSKMAG00000009033	rab11bb	100	95.413	Kryptolebias_marmoratus
ENSHCOG00000000954	-	100	95.413	ENSLBEG00000015248	rab11bb	100	95.413	Labrus_bergylta
ENSHCOG00000000954	-	100	88.532	ENSLBEG00000005981	-	100	88.532	Labrus_bergylta
ENSHCOG00000000954	-	100	95.872	ENSLBEG00000004172	-	100	95.872	Labrus_bergylta
ENSHCOG00000000954	-	100	95.413	ENSLACG00000016857	-	100	95.413	Latimeria_chalumnae
ENSHCOG00000000954	-	100	94.495	ENSMFAG00000003654	RAB11B	100	94.495	Macaca_fascicularis
ENSHCOG00000000954	-	100	94.495	ENSMLEG00000030601	-	100	94.495	Mandrillus_leucophaeus
ENSHCOG00000000954	-	100	94.954	ENSMAMG00000006378	rab11bb	100	94.954	Mastacembelus_armatus
ENSHCOG00000000954	-	100	95.413	ENSMAMG00000018533	-	100	95.413	Mastacembelus_armatus
ENSHCOG00000000954	-	100	95.413	ENSMZEG00005003352	rab11bb	100	95.413	Maylandia_zebra
ENSHCOG00000000954	-	100	96.789	ENSMZEG00005010975	-	100	96.789	Maylandia_zebra
ENSHCOG00000000954	-	100	94.495	ENSMICG00000034065	-	100	94.495	Microcebus_murinus
ENSHCOG00000000954	-	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSHCOG00000000954	-	100	96.789	ENSMMOG00000001250	-	100	96.789	Mola_mola
ENSHCOG00000000954	-	97	95.588	ENSMMOG00000007917	rab11bb	100	95.610	Mola_mola
ENSHCOG00000000954	-	100	95.413	ENSMODG00000003841	-	100	95.413	Monodelphis_domestica
ENSHCOG00000000954	-	100	95.413	ENSMALG00000022187	rab11bb	100	95.413	Monopterus_albus
ENSHCOG00000000954	-	97	85.922	ENSMLUG00000006677	-	100	85.990	Myotis_lucifugus
ENSHCOG00000000954	-	100	95.413	ENSNBRG00000000372	rab11bb	100	95.413	Neolamprologus_brichardi
ENSHCOG00000000954	-	100	96.789	ENSNBRG00000023885	-	100	96.789	Neolamprologus_brichardi
ENSHCOG00000000954	-	100	95.413	ENSMEUG00000003686	-	100	95.413	Notamacropus_eugenii
ENSHCOG00000000954	-	100	95.413	ENSONIG00000010435	rab11bb	100	95.413	Oreochromis_niloticus
ENSHCOG00000000954	-	100	96.789	ENSONIG00000002544	-	100	96.789	Oreochromis_niloticus
ENSHCOG00000000954	-	50	99.057	ENSOANG00000031567	-	85	90.756	Ornithorhynchus_anatinus
ENSHCOG00000000954	-	99	95.392	ENSORLG00000015284	-	72	95.392	Oryzias_latipes
ENSHCOG00000000954	-	100	94.954	ENSORLG00000013938	rab11bb	100	94.954	Oryzias_latipes
ENSHCOG00000000954	-	99	95.392	ENSORLG00020020844	RAB11B	99	95.392	Oryzias_latipes_hni
ENSHCOG00000000954	-	100	94.954	ENSORLG00020019393	rab11bb	100	94.954	Oryzias_latipes_hni
ENSHCOG00000000954	-	100	94.954	ENSORLG00015020173	rab11bb	100	94.954	Oryzias_latipes_hsok
ENSHCOG00000000954	-	99	95.392	ENSORLG00015016999	RAB11B	99	95.392	Oryzias_latipes_hsok
ENSHCOG00000000954	-	100	95.413	ENSOMEG00000017806	-	100	95.413	Oryzias_melastigma
ENSHCOG00000000954	-	100	95.872	ENSOMEG00000002562	-	100	95.872	Oryzias_melastigma
ENSHCOG00000000954	-	100	94.495	ENSPPAG00000028589	-	100	94.495	Pan_paniscus
ENSHCOG00000000954	-	100	94.495	ENSPTRG00000010422	RAB11B	100	94.495	Pan_troglodytes
ENSHCOG00000000954	-	100	94.495	ENSPANG00000007765	-	100	94.495	Papio_anubis
ENSHCOG00000000954	-	100	95.413	ENSPKIG00000011640	rab11bb	100	95.413	Paramormyrops_kingsleyae
ENSHCOG00000000954	-	100	95.872	ENSPKIG00000011703	-	100	95.872	Paramormyrops_kingsleyae
ENSHCOG00000000954	-	98	95.794	ENSPKIG00000001389	-	69	95.794	Paramormyrops_kingsleyae
ENSHCOG00000000954	-	97	92.857	ENSPSIG00000010242	-	89	87.826	Pelodiscus_sinensis
ENSHCOG00000000954	-	99	95.392	ENSPMGG00000014336	-	99	95.392	Periophthalmus_magnuspinnatus
ENSHCOG00000000954	-	100	94.954	ENSPMGG00000014333	-	100	94.954	Periophthalmus_magnuspinnatus
ENSHCOG00000000954	-	100	95.413	ENSPMGG00000009435	rab11bb	100	95.413	Periophthalmus_magnuspinnatus
ENSHCOG00000000954	-	97	96.078	ENSPCIG00000020371	-	99	94.340	Phascolarctos_cinereus
ENSHCOG00000000954	-	100	95.413	ENSPFOG00000024114	-	100	95.413	Poecilia_formosa
ENSHCOG00000000954	-	100	96.789	ENSPFOG00000006224	-	100	96.789	Poecilia_formosa
ENSHCOG00000000954	-	100	96.789	ENSPLAG00000014207	-	100	96.789	Poecilia_latipinna
ENSHCOG00000000954	-	100	95.413	ENSPLAG00000001598	rab11bb	100	95.413	Poecilia_latipinna
ENSHCOG00000000954	-	100	95.413	ENSPMEG00000012389	rab11bb	100	95.413	Poecilia_mexicana
ENSHCOG00000000954	-	100	96.789	ENSPMEG00000007842	-	100	96.789	Poecilia_mexicana
ENSHCOG00000000954	-	100	95.413	ENSPREG00000014269	rab11bb	100	95.413	Poecilia_reticulata
ENSHCOG00000000954	-	100	96.330	ENSPREG00000006336	-	100	96.330	Poecilia_reticulata
ENSHCOG00000000954	-	100	95.413	ENSPNYG00000004098	rab11bb	100	95.413	Pundamilia_nyererei
ENSHCOG00000000954	-	100	96.789	ENSPNYG00000019611	-	100	96.789	Pundamilia_nyererei
ENSHCOG00000000954	-	100	94.495	ENSRROG00000037812	-	100	94.495	Rhinopithecus_roxellana
ENSHCOG00000000954	-	97	95.588	ENSSHAG00000006816	-	97	93.868	Sarcophilus_harrisii
ENSHCOG00000000954	-	100	71.560	ENSSFOG00015006245	-	100	71.560	Scleropages_formosus
ENSHCOG00000000954	-	100	95.872	ENSSFOG00015009042	rab11bb	100	95.872	Scleropages_formosus
ENSHCOG00000000954	-	100	94.954	ENSSMAG00000004922	rab11bb	100	94.954	Scophthalmus_maximus
ENSHCOG00000000954	-	100	96.330	ENSSMAG00000018613	-	100	96.330	Scophthalmus_maximus
ENSHCOG00000000954	-	100	96.789	ENSSDUG00000002934	-	100	96.789	Seriola_dumerili
ENSHCOG00000000954	-	100	95.413	ENSSDUG00000013558	rab11bb	100	95.413	Seriola_dumerili
ENSHCOG00000000954	-	100	96.789	ENSSLDG00000005275	-	100	96.789	Seriola_lalandi_dorsalis
ENSHCOG00000000954	-	100	95.413	ENSSLDG00000020676	rab11bb	100	95.413	Seriola_lalandi_dorsalis
ENSHCOG00000000954	-	100	95.413	ENSSPUG00000002243	-	100	95.413	Sphenodon_punctatus
ENSHCOG00000000954	-	100	96.789	ENSSPAG00000014559	-	100	96.789	Stegastes_partitus
ENSHCOG00000000954	-	100	95.413	ENSSPAG00000011419	rab11bb	100	95.413	Stegastes_partitus
ENSHCOG00000000954	-	100	95.413	ENSTGUG00000000084	-	100	95.413	Taeniopygia_guttata
ENSHCOG00000000954	-	100	95.413	ENSTRUG00000022029	rab11bb	100	95.413	Takifugu_rubripes
ENSHCOG00000000954	-	99	95.853	ENSTRUG00000021614	-	99	95.853	Takifugu_rubripes
ENSHCOG00000000954	-	99	96.296	ENSTRUG00000021619	-	100	96.296	Takifugu_rubripes
ENSHCOG00000000954	-	99	95.392	ENSTNIG00000013184	-	99	95.392	Tetraodon_nigroviridis
ENSHCOG00000000954	-	99	96.296	ENSTNIG00000013182	-	100	96.296	Tetraodon_nigroviridis
ENSHCOG00000000954	-	96	95.545	ENSTNIG00000002003	-	100	95.567	Tetraodon_nigroviridis
ENSHCOG00000000954	-	100	94.495	ENSTNIG00000011081	rab11bb	100	94.495	Tetraodon_nigroviridis
ENSHCOG00000000954	-	97	94.608	ENSUAMG00000006639	-	100	93.689	Ursus_americanus
ENSHCOG00000000954	-	100	94.521	ENSXETG00000025484	rab11b.1	99	94.521	Xenopus_tropicalis
ENSHCOG00000000954	-	100	96.789	ENSXCOG00000009190	-	100	96.789	Xiphophorus_couchianus
ENSHCOG00000000954	-	100	95.413	ENSXCOG00000008042	-	100	95.413	Xiphophorus_couchianus
ENSHCOG00000000954	-	100	96.330	ENSXMAG00000024840	-	100	96.330	Xiphophorus_maculatus
ENSHCOG00000000954	-	100	95.413	ENSXMAG00000011926	rab11bb	100	95.413	Xiphophorus_maculatus