EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000974 (Gene tree)
Gene ID: 109513975
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11978 bases
Position: chrKV879870.1:2022871-2034848
Accession: 109513975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000211	zf-C2H2	PF00096.26	5e-34	1	7
ENSHCOP00000000211	zf-C2H2	PF00096.26	5e-34	2	7
ENSHCOP00000000211	zf-C2H2	PF00096.26	5e-34	3	7
ENSHCOP00000000211	zf-C2H2	PF00096.26	5e-34	4	7
ENSHCOP00000000211	zf-C2H2	PF00096.26	5e-34	5	7
ENSHCOP00000000211	zf-C2H2	PF00096.26	5e-34	6	7
ENSHCOP00000000211	zf-C2H2	PF00096.26	5e-34	7	7
ENSHCOP00000000211	zf-met	PF12874.7	9e-24	1	5
ENSHCOP00000000211	zf-met	PF12874.7	9e-24	2	5
ENSHCOP00000000211	zf-met	PF12874.7	9e-24	3	5
ENSHCOP00000000211	zf-met	PF12874.7	9e-24	4	5
ENSHCOP00000000211	zf-met	PF12874.7	9e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014155	-	4828	XM_019866743	ENSHCOP00000000211	1302 (aa)	XP_019722302	UPI00094EF350

Gene Model

Click here to download ENSHCOG00000000974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000974	sall1a	50	44.444	ENSHCOG00000001942	-	92	55.102
ENSHCOG00000000974	sall1a	53	50.000	ENSHCOG00000008028	-	79	57.143
ENSHCOG00000000974	sall1a	68	57.143	ENSHCOG00000010282	znf236	70	57.143
ENSHCOG00000000974	sall1a	58	36.145	ENSHCOG00000001338	-	95	55.102
ENSHCOG00000000974	sall1a	60	49.206	ENSHCOG00000000517	-	73	51.020
ENSHCOG00000000974	sall1a	70	65.385	ENSHCOG00000008519	sall4	100	65.385
ENSHCOG00000000974	sall1a	100	63.462	ENSHCOG00000004745	sall3b	68	63.462
ENSHCOG00000000974	sall1a	96	63.265	ENSHCOG00000010423	sall3a	88	63.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000974	sall1a	99	66.123	ENSG00000103449	SALL1	100	66.610	Homo_sapiens
ENSHCOG00000000974	sall1a	100	85.325	ENSAPOG00000022764	sall1a	100	85.401	Acanthochromis_polyacanthus
ENSHCOG00000000974	sall1a	99	65.522	ENSAMEG00000006817	SALL1	100	65.311	Ailuropoda_melanoleuca
ENSHCOG00000000974	sall1a	100	84.318	ENSACIG00000004231	sall1a	100	84.621	Amphilophus_citrinellus
ENSHCOG00000000974	sall1a	100	85.552	ENSAOCG00000002800	sall1a	100	85.628	Amphiprion_ocellaris
ENSHCOG00000000974	sall1a	100	85.325	ENSAPEG00000010179	sall1a	100	85.401	Amphiprion_percula
ENSHCOG00000000974	sall1a	99	85.466	ENSATEG00000003006	sall1a	99	85.541	Anabas_testudineus
ENSHCOG00000000974	sall1a	100	67.658	ENSAPLG00000003356	SALL1	100	67.783	Anas_platyrhynchos
ENSHCOG00000000974	sall1a	99	65.185	ENSACAG00000014399	SALL1	97	64.662	Anolis_carolinensis
ENSHCOG00000000974	sall1a	99	66.295	ENSANAG00000027238	SALL1	99	67.038	Aotus_nancymaae
ENSHCOG00000000974	sall1a	100	84.015	ENSACLG00000017148	sall1a	100	84.318	Astatotilapia_calliptera
ENSHCOG00000000974	sall1a	99	50.892	ENSAMXG00000017702	sall1b	99	51.209	Astyanax_mexicanus
ENSHCOG00000000974	sall1a	100	76.493	ENSAMXG00000018599	sall1a	100	76.795	Astyanax_mexicanus
ENSHCOG00000000974	sall1a	99	65.433	ENSBTAG00000008544	SALL1	100	66.123	Bos_taurus
ENSHCOG00000000974	sall1a	99	66.173	ENSCJAG00000001740	SALL1	99	66.913	Callithrix_jacchus
ENSHCOG00000000974	sall1a	99	65.651	ENSCAFG00000009755	SALL1	100	66.519	Canis_familiaris
ENSHCOG00000000974	sall1a	99	65.651	ENSCAFG00020002842	SALL1	100	66.519	Canis_lupus_dingo
ENSHCOG00000000974	sall1a	100	65.583	ENSCHIG00000026074	SALL1	100	65.975	Capra_hircus
ENSHCOG00000000974	sall1a	99	67.114	ENSTSYG00000029464	SALL1	99	66.741	Carlito_syrichta
ENSHCOG00000000974	sall1a	97	66.718	ENSCPOG00000006564	SALL1	99	67.052	Cavia_porcellus
ENSHCOG00000000974	sall1a	99	65.101	ENSCCAG00000001639	SALL1	100	64.985	Cebus_capucinus
ENSHCOG00000000974	sall1a	99	66.914	ENSCATG00000004982	SALL1	100	66.889	Cercocebus_atys
ENSHCOG00000000974	sall1a	99	66.021	ENSCLAG00000006380	SALL1	100	65.973	Chinchilla_lanigera
ENSHCOG00000000974	sall1a	99	66.245	ENSCSAG00000005319	SALL1	100	66.197	Chlorocebus_sabaeus
ENSHCOG00000000974	sall1a	64	64.671	ENSCHOG00000000800	-	69	63.780	Choloepus_hoffmanni
ENSHCOG00000000974	sall1a	100	67.386	ENSCPBG00000015924	SALL1	100	67.414	Chrysemys_picta_bellii
ENSHCOG00000000974	sall1a	99	67.212	ENSCANG00000036664	SALL1	100	67.094	Colobus_angolensis_palliatus
ENSHCOG00000000974	sall1a	99	65.075	ENSCGRG00001023314	-	100	65.379	Cricetulus_griseus_chok1gshd
ENSHCOG00000000974	sall1a	97	65.388	ENSCGRG00000009496	Sall1	99	65.699	Cricetulus_griseus_crigri
ENSHCOG00000000974	sall1a	99	83.195	ENSCSEG00000009349	sall1a	99	83.271	Cynoglossus_semilaevis
ENSHCOG00000000974	sall1a	90	83.772	ENSCVAG00000020513	sall1a	99	83.772	Cyprinodon_variegatus
ENSHCOG00000000974	sall1a	100	75.000	ENSDARG00000074319	sall1a	100	74.398	Danio_rerio
ENSHCOG00000000974	sall1a	99	47.615	ENSDARG00000075891	sall1b	99	46.316	Danio_rerio
ENSHCOG00000000974	sall1a	99	66.518	ENSDNOG00000016413	SALL1	100	66.617	Dasypus_novemcinctus
ENSHCOG00000000974	sall1a	98	66.109	ENSETEG00000015150	SALL1	99	66.313	Echinops_telfairi
ENSHCOG00000000974	sall1a	63	41.263	ENSEBUG00000008798	SALL1	95	35.650	Eptatretus_burgeri
ENSHCOG00000000974	sall1a	70	53.450	ENSEBUG00000011732	SALL1	97	59.184	Eptatretus_burgeri
ENSHCOG00000000974	sall1a	99	66.320	ENSEASG00005014602	SALL1	100	66.815	Equus_asinus_asinus
ENSHCOG00000000974	sall1a	90	64.812	ENSECAG00000011334	SALL1	99	65.407	Equus_caballus
ENSHCOG00000000974	sall1a	97	65.830	ENSEEUG00000002014	SALL1	99	66.387	Erinaceus_europaeus
ENSHCOG00000000974	sall1a	100	51.653	ENSELUG00000017774	-	100	52.526	Esox_lucius
ENSHCOG00000000974	sall1a	100	73.926	ENSELUG00000006159	sall1a	100	74.212	Esox_lucius
ENSHCOG00000000974	sall1a	99	65.350	ENSFCAG00000024654	SALL1	100	65.787	Felis_catus
ENSHCOG00000000974	sall1a	100	67.660	ENSFALG00000000074	SALL1	100	67.483	Ficedula_albicollis
ENSHCOG00000000974	sall1a	100	84.139	ENSFHEG00000012579	sall1a	100	84.290	Fundulus_heteroclitus
ENSHCOG00000000974	sall1a	73	63.265	ENSFHEG00000008424	-	86	63.265	Fundulus_heteroclitus
ENSHCOG00000000974	sall1a	100	78.959	ENSGMOG00000006103	sall1a	100	79.186	Gadus_morhua
ENSHCOG00000000974	sall1a	97	39.466	ENSGMOG00000013383	-	99	39.499	Gadus_morhua
ENSHCOG00000000974	sall1a	100	67.961	ENSGALG00000039238	SALL1	100	67.634	Gallus_gallus
ENSHCOG00000000974	sall1a	100	84.894	ENSGAFG00000009964	sall1a	100	84.970	Gambusia_affinis
ENSHCOG00000000974	sall1a	99	83.573	ENSGACG00000016702	sall1a	99	83.573	Gasterosteus_aculeatus
ENSHCOG00000000974	sall1a	100	67.163	ENSGAGG00000013979	SALL1	100	67.094	Gopherus_agassizii
ENSHCOG00000000974	sall1a	99	66.197	ENSGGOG00000000663	SALL1	100	66.617	Gorilla_gorilla
ENSHCOG00000000974	sall1a	100	84.015	ENSHBUG00000022005	sall1a	100	84.318	Haplochromis_burtoni
ENSHCOG00000000974	sall1a	99	66.840	ENSHGLG00000004288	-	100	66.667	Heterocephalus_glaber_female
ENSHCOG00000000974	sall1a	99	66.840	ENSHGLG00100017496	SALL1	100	66.667	Heterocephalus_glaber_male
ENSHCOG00000000974	sall1a	100	75.680	ENSIPUG00000016265	SALL1	100	74.906	Ictalurus_punctatus
ENSHCOG00000000974	sall1a	99	49.475	ENSIPUG00000022928	sall1b	99	49.400	Ictalurus_punctatus
ENSHCOG00000000974	sall1a	99	66.393	ENSSTOG00000020885	SALL1	100	66.295	Ictidomys_tridecemlineatus
ENSHCOG00000000974	sall1a	100	84.871	ENSKMAG00000016681	sall1a	100	84.947	Kryptolebias_marmoratus
ENSHCOG00000000974	sall1a	98	82.855	ENSLBEG00000012207	sall1a	95	82.933	Labrus_bergylta
ENSHCOG00000000974	sall1a	97	39.488	ENSLACG00000014018	-	98	39.174	Latimeria_chalumnae
ENSHCOG00000000974	sall1a	100	66.667	ENSLACG00000003556	SALL1	100	66.992	Latimeria_chalumnae
ENSHCOG00000000974	sall1a	100	73.672	ENSLOCG00000007283	sall1b	100	73.598	Lepisosteus_oculatus
ENSHCOG00000000974	sall1a	98	66.490	ENSLAFG00000015251	SALL1	99	66.742	Loxodonta_africana
ENSHCOG00000000974	sall1a	99	66.939	ENSMFAG00000003298	SALL1	100	66.840	Macaca_fascicularis
ENSHCOG00000000974	sall1a	93	67.014	ENSMMUG00000017200	SALL1	100	66.906	Macaca_mulatta
ENSHCOG00000000974	sall1a	93	66.960	ENSMNEG00000034770	SALL1	100	66.747	Macaca_nemestrina
ENSHCOG00000000974	sall1a	99	67.286	ENSMLEG00000036406	SALL1	100	67.094	Mandrillus_leucophaeus
ENSHCOG00000000974	sall1a	99	85.855	ENSMAMG00000004164	sall1a	99	85.552	Mastacembelus_armatus
ENSHCOG00000000974	sall1a	100	83.623	ENSMZEG00005006479	sall1a	100	84.242	Maylandia_zebra
ENSHCOG00000000974	sall1a	98	67.732	ENSMGAG00000004704	SALL1	100	67.400	Meleagris_gallopavo
ENSHCOG00000000974	sall1a	99	64.600	ENSMAUG00000019093	Sall1	100	64.911	Mesocricetus_auratus
ENSHCOG00000000974	sall1a	100	66.045	ENSMICG00000036486	SALL1	100	65.823	Microcebus_murinus
ENSHCOG00000000974	sall1a	99	83.851	ENSMMOG00000016400	sall1a	99	83.927	Mola_mola
ENSHCOG00000000974	sall1a	99	67.459	ENSMODG00000013114	SALL1	99	67.461	Monodelphis_domestica
ENSHCOG00000000974	sall1a	99	84.557	ENSMALG00000013400	sall1a	99	84.633	Monopterus_albus
ENSHCOG00000000974	sall1a	99	65.674	MGP_CAROLIEiJ_G0031362	Sall1	100	65.530	Mus_caroli
ENSHCOG00000000974	sall1a	99	65.697	ENSMUSG00000031665	Sall1	100	65.336	Mus_musculus
ENSHCOG00000000974	sall1a	99	65.502	MGP_PahariEiJ_G0022961	Sall1	100	65.311	Mus_pahari
ENSHCOG00000000974	sall1a	99	65.574	MGP_SPRETEiJ_G0032480	Sall1	100	65.188	Mus_spretus
ENSHCOG00000000974	sall1a	98	65.399	ENSMPUG00000003265	SALL1	96	65.906	Mustela_putorius_furo
ENSHCOG00000000974	sall1a	97	64.324	ENSMLUG00000015541	SALL1	99	65.734	Myotis_lucifugus
ENSHCOG00000000974	sall1a	100	84.242	ENSNBRG00000009307	sall1a	100	84.545	Neolamprologus_brichardi
ENSHCOG00000000974	sall1a	92	78.022	ENSNLEG00000001008	SALL1	99	77.596	Nomascus_leucogenys
ENSHCOG00000000974	sall1a	99	67.385	ENSMEUG00000012206	SALL1	99	67.238	Notamacropus_eugenii
ENSHCOG00000000974	sall1a	86	68.583	ENSOPRG00000005645	SALL1	71	70.657	Ochotona_princeps
ENSHCOG00000000974	sall1a	99	66.170	ENSODEG00000003685	SALL1	100	66.147	Octodon_degus
ENSHCOG00000000974	sall1a	100	84.242	ENSONIG00000002831	sall1a	100	84.545	Oreochromis_niloticus
ENSHCOG00000000974	sall1a	93	74.308	ENSOANG00000013399	SALL1	98	74.603	Ornithorhynchus_anatinus
ENSHCOG00000000974	sall1a	100	83.283	ENSORLG00000013827	sall1a	100	83.820	Oryzias_latipes
ENSHCOG00000000974	sall1a	100	83.359	ENSORLG00020020570	sall1a	100	83.359	Oryzias_latipes_hni
ENSHCOG00000000974	sall1a	100	83.283	ENSORLG00015018830	sall1a	100	83.820	Oryzias_latipes_hsok
ENSHCOG00000000974	sall1a	100	83.661	ENSOMEG00000016043	sall1a	100	83.931	Oryzias_melastigma
ENSHCOG00000000974	sall1a	99	66.913	ENSOGAG00000027316	SALL1	100	66.988	Otolemur_garnettii
ENSHCOG00000000974	sall1a	100	62.211	ENSOARG00000017583	SALL1	100	62.202	Ovis_aries
ENSHCOG00000000974	sall1a	97	66.616	ENSPPAG00000035657	SALL1	99	66.768	Pan_paniscus
ENSHCOG00000000974	sall1a	97	50.309	ENSPPAG00000035136	-	98	50.775	Pan_paniscus
ENSHCOG00000000974	sall1a	99	65.350	ENSPPRG00000023283	SALL1	100	65.653	Panthera_pardus
ENSHCOG00000000974	sall1a	84	75.258	ENSPTIG00000013539	-	94	70.377	Panthera_tigris_altaica
ENSHCOG00000000974	sall1a	99	66.073	ENSPTRG00000008108	SALL1	100	66.617	Pan_troglodytes
ENSHCOG00000000974	sall1a	95	50.471	ENSPTRG00000045256	-	97	50.946	Pan_troglodytes
ENSHCOG00000000974	sall1a	99	67.212	ENSPANG00000024176	SALL1	100	66.865	Papio_anubis
ENSHCOG00000000974	sall1a	100	67.903	ENSPKIG00000005383	-	100	68.282	Paramormyrops_kingsleyae
ENSHCOG00000000974	sall1a	100	70.708	ENSPKIG00000022251	sall1a	100	70.739	Paramormyrops_kingsleyae
ENSHCOG00000000974	sall1a	100	68.338	ENSPSIG00000008582	SALL1	100	67.459	Pelodiscus_sinensis
ENSHCOG00000000974	sall1a	99	79.880	ENSPMGG00000021788	sall1a	99	79.955	Periophthalmus_magnuspinnatus
ENSHCOG00000000974	sall1a	52	54.202	ENSPMAG00000008148	sall1b	97	48.000	Petromyzon_marinus
ENSHCOG00000000974	sall1a	99	67.236	ENSPCIG00000017840	SALL1	99	67.089	Phascolarctos_cinereus
ENSHCOG00000000974	sall1a	98	84.485	ENSPFOG00000015799	sall1a	96	84.562	Poecilia_formosa
ENSHCOG00000000974	sall1a	100	84.668	ENSPLAG00000022539	sall1a	100	84.743	Poecilia_latipinna
ENSHCOG00000000974	sall1a	100	84.819	ENSPMEG00000020894	sall1a	100	84.894	Poecilia_mexicana
ENSHCOG00000000974	sall1a	100	84.970	ENSPREG00000006802	sall1a	100	85.045	Poecilia_reticulata
ENSHCOG00000000974	sall1a	90	65.000	ENSPPYG00000007345	SALL1	96	65.892	Pongo_abelii
ENSHCOG00000000974	sall1a	84	68.354	ENSPCAG00000008162	SALL1	93	68.421	Procavia_capensis
ENSHCOG00000000974	sall1a	99	66.124	ENSPCOG00000028192	SALL1	100	66.443	Propithecus_coquereli
ENSHCOG00000000974	sall1a	67	68.548	ENSPVAG00000015374	SALL1	100	69.037	Pteropus_vampyrus
ENSHCOG00000000974	sall1a	100	84.091	ENSPNYG00000010865	sall1a	100	84.394	Pundamilia_nyererei
ENSHCOG00000000974	sall1a	100	74.887	ENSPNAG00000023644	sall1a	100	75.189	Pygocentrus_nattereri
ENSHCOG00000000974	sall1a	96	65.306	ENSPNAG00000028248	-	69	65.306	Pygocentrus_nattereri
ENSHCOG00000000974	sall1a	99	52.928	ENSPNAG00000007442	sall1b	99	52.774	Pygocentrus_nattereri
ENSHCOG00000000974	sall1a	99	65.195	ENSRNOG00000013907	Sall1	100	65.625	Rattus_norvegicus
ENSHCOG00000000974	sall1a	93	66.987	ENSRBIG00000015707	SALL1	100	66.933	Rhinopithecus_bieti
ENSHCOG00000000974	sall1a	97	67.278	ENSRROG00000035777	SALL1	100	66.986	Rhinopithecus_roxellana
ENSHCOG00000000974	sall1a	99	66.148	ENSSBOG00000032186	SALL1	99	66.889	Saimiri_boliviensis_boliviensis
ENSHCOG00000000974	sall1a	99	66.790	ENSSHAG00000009477	SALL1	99	66.915	Sarcophilus_harrisii
ENSHCOG00000000974	sall1a	98	70.192	ENSSFOG00015001590	sall1a	99	70.107	Scleropages_formosus
ENSHCOG00000000974	sall1a	100	70.606	ENSSFOG00015020020	sall1a	100	70.232	Scleropages_formosus
ENSHCOG00000000974	sall1a	99	84.784	ENSSMAG00000009160	sall1a	99	84.860	Scophthalmus_maximus
ENSHCOG00000000974	sall1a	99	85.844	ENSSDUG00000006507	sall1a	99	85.920	Seriola_dumerili
ENSHCOG00000000974	sall1a	81	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSHCOG00000000974	sall1a	99	85.995	ENSSLDG00000017721	sall1a	99	86.071	Seriola_lalandi_dorsalis
ENSHCOG00000000974	sall1a	97	66.514	ENSSARG00000000661	SALL1	99	66.717	Sorex_araneus
ENSHCOG00000000974	sall1a	100	67.212	ENSSPUG00000000156	SALL1	100	67.262	Sphenodon_punctatus
ENSHCOG00000000974	sall1a	100	85.790	ENSSPAG00000021615	sall1a	100	85.865	Stegastes_partitus
ENSHCOG00000000974	sall1a	99	65.448	ENSSSCG00000002836	SALL1	100	65.405	Sus_scrofa
ENSHCOG00000000974	sall1a	100	67.586	ENSTGUG00000007514	SALL1	100	67.261	Taeniopygia_guttata
ENSHCOG00000000974	sall1a	91	81.577	ENSTRUG00000008950	sall1a	100	81.743	Takifugu_rubripes
ENSHCOG00000000974	sall1a	92	79.653	ENSTNIG00000004257	sall1a	100	80.083	Tetraodon_nigroviridis
ENSHCOG00000000974	sall1a	75	72.483	ENSTBEG00000002119	-	53	75.168	Tupaia_belangeri
ENSHCOG00000000974	sall1a	90	65.243	ENSUAMG00000023379	-	92	64.789	Ursus_americanus
ENSHCOG00000000974	sall1a	90	65.196	ENSVVUG00000019383	-	99	65.340	Vulpes_vulpes
ENSHCOG00000000974	sall1a	100	63.498	ENSXETG00000018417	sall1	100	63.358	Xenopus_tropicalis
ENSHCOG00000000974	sall1a	97	35.011	ENSXETG00000017176	sall2	88	36.691	Xenopus_tropicalis
ENSHCOG00000000974	sall1a	100	84.819	ENSXMAG00000016273	sall1a	100	84.894	Xiphophorus_maculatus