EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000000985 (Gene tree)
Gene ID: 109532170
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3271 bases
Position: chrKV880451.1:2914644-2917914
Accession: 109532170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017299	MMR_HSR1	PF01926.23	5.1e-07	1	1
ENSHCOP00000017301	MMR_HSR1	PF01926.23	5.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014144	-	1797	-	ENSHCOP00000017299	204 (aa)	-	-
ENSHCOT00000014146	-	657	XM_019896848	ENSHCOP00000017301	218 (aa)	XP_019752407	UPI00094E578F

Gene Model

Click here to download ENSHCOG00000000985's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000000985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000000985	-	94	38.537	ENSHCOG00000017123	-	93	38.537
ENSHCOG00000000985	-	74	32.515	ENSHCOG00000018456	si:ch73-116o1.2	81	34.286
ENSHCOG00000000985	-	77	35.669	ENSHCOG00000013130	rab6bb	75	35.669
ENSHCOG00000000985	-	77	36.943	ENSHCOG00000006550	-	75	36.943
ENSHCOG00000000985	-	99	80.275	ENSHCOG00000000232	rab11al	99	80.275
ENSHCOG00000000985	-	77	30.818	ENSHCOG00000018554	rasd4	77	30.435
ENSHCOG00000000985	-	79	43.210	ENSHCOG00000017086	RAB15	76	43.210
ENSHCOG00000000985	-	77	43.038	ENSHCOG00000012376	rab12	84	37.500
ENSHCOG00000000985	-	96	44.811	ENSHCOG00000001137	rab1ab	99	45.755
ENSHCOG00000000985	-	94	62.019	ENSHCOG00000007187	rab25b	85	62.019
ENSHCOG00000000985	-	57	30.252	ENSHCOG00000014829	-	60	30.252
ENSHCOG00000000985	-	78	47.500	ENSHCOG00000020238	-	76	45.783
ENSHCOG00000000985	-	89	35.326	ENSHCOG00000003569	rab33ba	75	35.912
ENSHCOG00000000985	-	77	42.675	ENSHCOG00000001145	rab22a	83	42.236
ENSHCOG00000000985	-	77	42.593	ENSHCOG00000005024	rab9b	83	41.667
ENSHCOG00000000985	-	71	35.417	ENSHCOG00000013919	rab23	85	33.908
ENSHCOG00000000985	-	94	36.190	ENSHCOG00000004225	-	97	36.190
ENSHCOG00000000985	-	90	37.566	ENSHCOG00000016322	RAB7A	88	37.566
ENSHCOG00000000985	-	100	94.037	ENSHCOG00000002423	rab11bb	100	94.037
ENSHCOG00000000985	-	91	48.148	ENSHCOG00000013180	-	87	48.148
ENSHCOG00000000985	-	94	36.842	ENSHCOG00000005802	RAB9A	91	36.842
ENSHCOG00000000985	-	75	33.333	ENSHCOG00000011080	kras	94	34.444
ENSHCOG00000000985	-	76	32.903	ENSHCOG00000009757	ran	70	32.903
ENSHCOG00000000985	-	96	45.455	ENSHCOG00000010023	-	99	45.455
ENSHCOG00000000985	-	77	49.682	ENSHCOG00000004662	rab5c	72	48.447
ENSHCOG00000000985	-	78	55.000	ENSHCOG00000014428	rab2a	81	53.216
ENSHCOG00000000985	-	77	35.032	ENSHCOG00000014711	rab6ba	75	35.032
ENSHCOG00000000985	-	94	47.959	ENSHCOG00000019224	rab14	90	47.959
ENSHCOG00000000985	-	73	30.000	ENSHCOG00000013807	rheb	86	30.000
ENSHCOG00000000985	-	74	31.034	ENSHCOG00000019709	rasl11a	70	31.034
ENSHCOG00000000985	-	80	45.783	ENSHCOG00000003981	RAB39B	82	44.828
ENSHCOG00000000985	-	100	85.321	ENSHCOG00000005652	rab11a	100	85.321
ENSHCOG00000000985	-	71	42.000	ENSHCOG00000012834	-	64	42.000
ENSHCOG00000000985	-	94	35.849	ENSHCOG00000004086	rab9a	97	35.849
ENSHCOG00000000985	-	75	39.216	ENSHCOG00000010707	rab30	83	39.216
ENSHCOG00000000985	-	98	63.380	ENSHCOG00000013095	rab25a	98	63.380
ENSHCOG00000000985	-	83	37.714	ENSHCOG00000004726	rab33a	75	37.714
ENSHCOG00000000985	-	95	34.101	ENSHCOG00000015692	si:dkey-34d22.5	97	34.101
ENSHCOG00000000985	-	65	30.282	ENSHCOG00000010468	arl8bb	72	30.282
ENSHCOG00000000985	-	78	47.826	ENSHCOG00000019732	-	83	44.633
ENSHCOG00000000985	-	80	47.239	ENSHCOG00000007440	rab13	97	45.198
ENSHCOG00000000985	-	94	31.754	ENSHCOG00000020527	rab34a	77	31.754
ENSHCOG00000000985	-	77	36.943	ENSHCOG00000004404	rab41	74	36.943
ENSHCOG00000000985	-	100	91.743	ENSHCOG00000000954	-	100	91.743
ENSHCOG00000000985	-	78	53.459	ENSHCOG00000019468	rab1ba	83	52.410
ENSHCOG00000000985	-	78	40.462	ENSHCOG00000009133	zgc:101559	73	40.462
ENSHCOG00000000985	-	81	46.386	ENSHCOG00000002217	rab18b	83	45.614
ENSHCOG00000000985	-	99	40.465	ENSHCOG00000006538	si:dkey-16l2.16	100	40.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000000985	-	100	93.578	ENSAPOG00000023455	rab11bb	100	93.578	Acanthochromis_polyacanthus
ENSHCOG00000000985	-	100	81.651	ENSACIG00000019631	rab11bb	100	81.651	Amphilophus_citrinellus
ENSHCOG00000000985	-	100	93.578	ENSACIG00000024376	-	100	93.578	Amphilophus_citrinellus
ENSHCOG00000000985	-	100	93.578	ENSAOCG00000018239	rab11bb	100	93.578	Amphiprion_ocellaris
ENSHCOG00000000985	-	100	93.578	ENSAOCG00000018849	-	100	93.578	Amphiprion_ocellaris
ENSHCOG00000000985	-	100	93.578	ENSAPEG00000016590	rab11bb	100	93.578	Amphiprion_percula
ENSHCOG00000000985	-	100	93.119	ENSATEG00000023725	-	100	93.119	Anabas_testudineus
ENSHCOG00000000985	-	100	93.578	ENSATEG00000017696	rab11bb	100	93.578	Anabas_testudineus
ENSHCOG00000000985	-	94	93.204	ENSAPLG00000011046	-	94	93.204	Anas_platyrhynchos
ENSHCOG00000000985	-	100	93.578	ENSACLG00000007076	rab11bb	100	93.578	Astatotilapia_calliptera
ENSHCOG00000000985	-	100	93.578	ENSACLG00000005446	-	100	93.578	Astatotilapia_calliptera
ENSHCOG00000000985	-	100	92.661	ENSAMXG00000037623	-	100	92.661	Astyanax_mexicanus
ENSHCOG00000000985	-	100	93.578	ENSAMXG00000042655	rab11bb	100	93.578	Astyanax_mexicanus
ENSHCOG00000000985	-	100	91.743	ENSBTAG00000002475	RAB11B	100	91.743	Bos_taurus
ENSHCOG00000000985	-	96	90.431	ENSCHIG00000022426	-	93	90.431	Capra_hircus
ENSHCOG00000000985	-	100	91.743	ENSCATG00000029188	-	100	91.743	Cercocebus_atys
ENSHCOG00000000985	-	100	92.202	ENSCPBG00000017056	-	100	92.202	Chrysemys_picta_bellii
ENSHCOG00000000985	-	100	93.578	ENSCSEG00000012149	rab11bb	100	93.578	Cynoglossus_semilaevis
ENSHCOG00000000985	-	100	93.119	ENSCSEG00000007239	-	100	93.119	Cynoglossus_semilaevis
ENSHCOG00000000985	-	100	93.578	ENSCVAG00000017021	-	100	93.578	Cyprinodon_variegatus
ENSHCOG00000000985	-	100	89.908	ENSCVAG00000019751	-	100	89.908	Cyprinodon_variegatus
ENSHCOG00000000985	-	100	92.661	ENSCVAG00000019718	-	100	92.661	Cyprinodon_variegatus
ENSHCOG00000000985	-	100	94.037	ENSDARG00000090086	rab11bb	100	94.037	Danio_rerio
ENSHCOG00000000985	-	98	91.080	ENSETEG00000000905	-	98	91.080	Echinops_telfairi
ENSHCOG00000000985	-	99	90.233	ENSEASG00005003708	-	99	90.233	Equus_asinus_asinus
ENSHCOG00000000985	-	99	90.233	ENSECAG00000000716	RAB11B	99	90.233	Equus_caballus
ENSHCOG00000000985	-	100	93.578	ENSELUG00000021148	rab11bb	100	93.578	Esox_lucius
ENSHCOG00000000985	-	100	91.284	ENSELUG00000000916	-	100	91.284	Esox_lucius
ENSHCOG00000000985	-	100	92.202	ENSELUG00000020948	-	98	96.094	Esox_lucius
ENSHCOG00000000985	-	100	92.202	ENSFALG00000011828	-	100	92.202	Ficedula_albicollis
ENSHCOG00000000985	-	100	93.578	ENSFHEG00000018353	rab11bb	100	93.578	Fundulus_heteroclitus
ENSHCOG00000000985	-	100	93.119	ENSFHEG00000022676	-	100	93.119	Fundulus_heteroclitus
ENSHCOG00000000985	-	100	93.578	ENSGMOG00000009211	rab11bb	100	93.578	Gadus_morhua
ENSHCOG00000000985	-	99	91.667	ENSGMOG00000009668	-	99	91.667	Gadus_morhua
ENSHCOG00000000985	-	100	92.202	ENSGALG00000000613	RAB11B	100	92.202	Gallus_gallus
ENSHCOG00000000985	-	100	93.578	ENSGAFG00000007102	rab11bb	100	93.578	Gambusia_affinis
ENSHCOG00000000985	-	100	94.037	ENSGACG00000015479	rab11bb	100	94.037	Gasterosteus_aculeatus
ENSHCOG00000000985	-	100	88.991	ENSGACG00000013297	-	99	88.991	Gasterosteus_aculeatus
ENSHCOG00000000985	-	100	91.743	ENSGGOG00000014516	RAB11B	100	91.743	Gorilla_gorilla
ENSHCOG00000000985	-	100	93.578	ENSHBUG00000009947	-	100	93.578	Haplochromis_burtoni
ENSHCOG00000000985	-	100	93.578	ENSHBUG00000014777	rab11bb	100	93.578	Haplochromis_burtoni
ENSHCOG00000000985	-	100	92.661	ENSIPUG00000025100	rab11b	100	92.661	Ictalurus_punctatus
ENSHCOG00000000985	-	100	93.578	ENSIPUG00000019927	rab11bb	100	93.578	Ictalurus_punctatus
ENSHCOG00000000985	-	100	93.578	ENSKMAG00000006170	-	100	93.578	Kryptolebias_marmoratus
ENSHCOG00000000985	-	100	93.578	ENSKMAG00000009033	rab11bb	100	93.578	Kryptolebias_marmoratus
ENSHCOG00000000985	-	100	93.578	ENSLBEG00000015248	rab11bb	100	93.578	Labrus_bergylta
ENSHCOG00000000985	-	100	92.661	ENSLBEG00000004172	-	100	92.661	Labrus_bergylta
ENSHCOG00000000985	-	100	86.239	ENSLBEG00000005981	-	100	86.239	Labrus_bergylta
ENSHCOG00000000985	-	100	92.202	ENSLACG00000016857	-	100	92.202	Latimeria_chalumnae
ENSHCOG00000000985	-	100	91.743	ENSMFAG00000003654	RAB11B	100	91.743	Macaca_fascicularis
ENSHCOG00000000985	-	100	91.743	ENSMLEG00000030601	-	100	91.743	Mandrillus_leucophaeus
ENSHCOG00000000985	-	100	93.578	ENSMAMG00000006378	rab11bb	100	93.578	Mastacembelus_armatus
ENSHCOG00000000985	-	100	92.661	ENSMAMG00000018533	-	100	92.661	Mastacembelus_armatus
ENSHCOG00000000985	-	100	93.578	ENSMZEG00005003352	rab11bb	100	93.578	Maylandia_zebra
ENSHCOG00000000985	-	100	93.578	ENSMZEG00005010975	-	100	93.578	Maylandia_zebra
ENSHCOG00000000985	-	100	91.743	ENSMICG00000034065	-	100	91.743	Microcebus_murinus
ENSHCOG00000000985	-	99	90.783	ENSMMOG00000001238	-	99	90.783	Mola_mola
ENSHCOG00000000985	-	94	93.659	ENSMMOG00000007917	rab11bb	100	93.659	Mola_mola
ENSHCOG00000000985	-	100	93.578	ENSMMOG00000001250	-	100	93.578	Mola_mola
ENSHCOG00000000985	-	100	92.202	ENSMODG00000003841	-	100	92.202	Monodelphis_domestica
ENSHCOG00000000985	-	100	93.578	ENSMALG00000022187	rab11bb	100	93.578	Monopterus_albus
ENSHCOG00000000985	-	94	84.058	ENSMLUG00000006677	-	100	84.058	Myotis_lucifugus
ENSHCOG00000000985	-	100	93.578	ENSNBRG00000000372	rab11bb	100	93.578	Neolamprologus_brichardi
ENSHCOG00000000985	-	100	93.578	ENSNBRG00000023885	-	100	93.578	Neolamprologus_brichardi
ENSHCOG00000000985	-	100	92.202	ENSMEUG00000003686	-	100	92.202	Notamacropus_eugenii
ENSHCOG00000000985	-	100	93.578	ENSONIG00000002544	-	100	93.578	Oreochromis_niloticus
ENSHCOG00000000985	-	100	93.578	ENSONIG00000010435	rab11bb	100	93.578	Oreochromis_niloticus
ENSHCOG00000000985	-	56	91.228	ENSOANG00000031567	-	82	91.228	Ornithorhynchus_anatinus
ENSHCOG00000000985	-	99	93.088	ENSORLG00000015284	-	72	93.088	Oryzias_latipes
ENSHCOG00000000985	-	100	93.119	ENSORLG00000013938	rab11bb	100	93.119	Oryzias_latipes
ENSHCOG00000000985	-	99	93.088	ENSORLG00020020844	RAB11B	99	93.088	Oryzias_latipes_hni
ENSHCOG00000000985	-	100	93.119	ENSORLG00020019393	rab11bb	100	93.119	Oryzias_latipes_hni
ENSHCOG00000000985	-	100	93.119	ENSORLG00015020173	rab11bb	100	93.119	Oryzias_latipes_hsok
ENSHCOG00000000985	-	99	93.088	ENSORLG00015016999	RAB11B	99	93.088	Oryzias_latipes_hsok
ENSHCOG00000000985	-	100	93.578	ENSOMEG00000002562	-	100	93.578	Oryzias_melastigma
ENSHCOG00000000985	-	100	93.578	ENSOMEG00000017806	-	100	93.578	Oryzias_melastigma
ENSHCOG00000000985	-	100	91.743	ENSPPAG00000028589	-	100	91.743	Pan_paniscus
ENSHCOG00000000985	-	100	91.743	ENSPTRG00000010422	RAB11B	100	91.743	Pan_troglodytes
ENSHCOG00000000985	-	100	91.743	ENSPANG00000007765	-	100	91.743	Papio_anubis
ENSHCOG00000000985	-	100	92.661	ENSPKIG00000011640	rab11bb	100	92.661	Paramormyrops_kingsleyae
ENSHCOG00000000985	-	100	92.202	ENSPKIG00000011703	-	100	92.202	Paramormyrops_kingsleyae
ENSHCOG00000000985	-	98	92.523	ENSPKIG00000001389	-	69	92.523	Paramormyrops_kingsleyae
ENSHCOG00000000985	-	98	88.584	ENSPSIG00000010242	-	85	88.584	Pelodiscus_sinensis
ENSHCOG00000000985	-	99	88.018	ENSPMGG00000014336	-	99	88.018	Periophthalmus_magnuspinnatus
ENSHCOG00000000985	-	100	92.202	ENSPMGG00000014333	-	100	92.202	Periophthalmus_magnuspinnatus
ENSHCOG00000000985	-	100	93.578	ENSPMGG00000009435	rab11bb	100	93.578	Periophthalmus_magnuspinnatus
ENSHCOG00000000985	-	97	91.038	ENSPCIG00000020371	-	99	91.038	Phascolarctos_cinereus
ENSHCOG00000000985	-	100	93.578	ENSPFOG00000006224	-	100	93.578	Poecilia_formosa
ENSHCOG00000000985	-	100	93.578	ENSPFOG00000024114	-	100	93.578	Poecilia_formosa
ENSHCOG00000000985	-	100	93.578	ENSPLAG00000014207	-	100	93.578	Poecilia_latipinna
ENSHCOG00000000985	-	100	93.578	ENSPLAG00000001598	rab11bb	100	93.578	Poecilia_latipinna
ENSHCOG00000000985	-	100	93.578	ENSPMEG00000012389	rab11bb	100	93.578	Poecilia_mexicana
ENSHCOG00000000985	-	100	93.578	ENSPMEG00000007842	-	100	93.578	Poecilia_mexicana
ENSHCOG00000000985	-	100	93.578	ENSPREG00000014269	rab11bb	100	93.578	Poecilia_reticulata
ENSHCOG00000000985	-	100	93.119	ENSPREG00000006336	-	100	93.119	Poecilia_reticulata
ENSHCOG00000000985	-	100	93.578	ENSPNYG00000004098	rab11bb	100	93.578	Pundamilia_nyererei
ENSHCOG00000000985	-	100	93.578	ENSPNYG00000019611	-	100	93.578	Pundamilia_nyererei
ENSHCOG00000000985	-	100	91.743	ENSRROG00000037812	-	100	91.743	Rhinopithecus_roxellana
ENSHCOG00000000985	-	97	91.509	ENSSHAG00000006816	-	97	91.509	Sarcophilus_harrisii
ENSHCOG00000000985	-	100	91.743	ENSSFOG00015009042	rab11bb	100	91.743	Scleropages_formosus
ENSHCOG00000000985	-	100	69.725	ENSSFOG00015006245	-	100	69.725	Scleropages_formosus
ENSHCOG00000000985	-	100	90.367	ENSSMAG00000018613	-	100	90.367	Scophthalmus_maximus
ENSHCOG00000000985	-	100	93.119	ENSSMAG00000004922	rab11bb	100	93.119	Scophthalmus_maximus
ENSHCOG00000000985	-	100	93.578	ENSSDUG00000002934	-	100	93.578	Seriola_dumerili
ENSHCOG00000000985	-	100	93.578	ENSSDUG00000013558	rab11bb	100	93.578	Seriola_dumerili
ENSHCOG00000000985	-	100	93.578	ENSSLDG00000005275	-	100	93.578	Seriola_lalandi_dorsalis
ENSHCOG00000000985	-	100	93.578	ENSSLDG00000020676	rab11bb	100	93.578	Seriola_lalandi_dorsalis
ENSHCOG00000000985	-	100	92.202	ENSSPUG00000002243	-	100	92.202	Sphenodon_punctatus
ENSHCOG00000000985	-	100	93.578	ENSSPAG00000011419	rab11bb	100	93.578	Stegastes_partitus
ENSHCOG00000000985	-	100	93.578	ENSSPAG00000014559	-	100	93.578	Stegastes_partitus
ENSHCOG00000000985	-	100	92.202	ENSTGUG00000000084	-	100	92.202	Taeniopygia_guttata
ENSHCOG00000000985	-	99	89.862	ENSTRUG00000021614	-	99	89.862	Takifugu_rubripes
ENSHCOG00000000985	-	99	93.519	ENSTRUG00000021619	-	100	93.519	Takifugu_rubripes
ENSHCOG00000000985	-	100	93.578	ENSTRUG00000022029	rab11bb	100	93.578	Takifugu_rubripes
ENSHCOG00000000985	-	93	91.626	ENSTNIG00000002003	-	100	91.626	Tetraodon_nigroviridis
ENSHCOG00000000985	-	100	93.578	ENSTNIG00000011081	rab11bb	100	93.578	Tetraodon_nigroviridis
ENSHCOG00000000985	-	99	89.401	ENSTNIG00000013184	-	99	89.401	Tetraodon_nigroviridis
ENSHCOG00000000985	-	99	93.519	ENSTNIG00000013182	-	100	93.519	Tetraodon_nigroviridis
ENSHCOG00000000985	-	94	92.683	ENSUAMG00000006639	-	99	92.683	Ursus_americanus
ENSHCOG00000000985	-	100	91.781	ENSXETG00000025484	rab11b.1	99	91.781	Xenopus_tropicalis
ENSHCOG00000000985	-	100	93.578	ENSXCOG00000009190	-	100	93.578	Xiphophorus_couchianus
ENSHCOG00000000985	-	100	93.578	ENSXCOG00000008042	-	100	93.578	Xiphophorus_couchianus
ENSHCOG00000000985	-	100	93.119	ENSXMAG00000024840	-	100	93.119	Xiphophorus_maculatus
ENSHCOG00000000985	-	100	93.578	ENSXMAG00000011926	rab11bb	100	93.578	Xiphophorus_maculatus