EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000001012 (Gene tree)
Gene ID: 109527327
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11275 bases
Position: chrKV880294.1:173097-184371
Accession: 109527327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017320	MMR_HSR1	PF01926.23	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014108	SRL (1 of many)-201	3154	XM_019889180	ENSHCOP00000017320	906 (aa)	XP_019744739	UPI00094EB306

Gene Model

Click here to download ENSHCOG00000001012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000001012	SRL	50	74.505	ENSHCOG00000008687	srl	98	74.505

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001012	SRL	51	71.242	ENSG00000185739	SRL	99	72.769	Homo_sapiens
ENSHCOG00000001012	SRL	53	82.851	ENSAPOG00000012432	SRL	99	84.649	Acanthochromis_polyacanthus
ENSHCOG00000001012	SRL	50	74.945	ENSAPOG00000018093	srl	99	74.834	Acanthochromis_polyacanthus
ENSHCOG00000001012	SRL	50	70.640	ENSAMEG00000010862	SRL	50	71.965	Ailuropoda_melanoleuca
ENSHCOG00000001012	SRL	50	74.945	ENSACIG00000015799	srl	98	74.945	Amphilophus_citrinellus
ENSHCOG00000001012	SRL	50	85.463	ENSACIG00000015419	SRL	99	85.463	Amphilophus_citrinellus
ENSHCOG00000001012	SRL	52	84.154	ENSAOCG00000017049	SRL	99	84.582	Amphiprion_ocellaris
ENSHCOG00000001012	SRL	50	74.725	ENSAPEG00000006911	srl	94	74.725	Amphiprion_percula
ENSHCOG00000001012	SRL	52	80.300	ENSAPEG00000006533	SRL	99	82.227	Amphiprion_percula
ENSHCOG00000001012	SRL	63	75.639	ENSATEG00000009643	SRL	100	62.473	Anabas_testudineus
ENSHCOG00000001012	SRL	50	74.945	ENSATEG00000024315	srl	94	74.945	Anabas_testudineus
ENSHCOG00000001012	SRL	50	71.121	ENSACAG00000016380	SRL	83	71.030	Anolis_carolinensis
ENSHCOG00000001012	SRL	51	74.514	ENSACLG00000027685	srl	99	74.514	Astatotilapia_calliptera
ENSHCOG00000001012	SRL	93	80.000	ENSACLG00000024674	SRL	99	60.240	Astatotilapia_calliptera
ENSHCOG00000001012	SRL	50	75.717	ENSAMXG00000018789	srl	86	75.717	Astyanax_mexicanus
ENSHCOG00000001012	SRL	54	78.076	ENSAMXG00000038693	SRL	100	78.855	Astyanax_mexicanus
ENSHCOG00000001012	SRL	50	71.018	ENSBTAG00000001078	SRL	60	69.278	Bos_taurus
ENSHCOG00000001012	SRL	50	71.523	ENSCJAG00000019750	SRL	95	72.331	Callithrix_jacchus
ENSHCOG00000001012	SRL	50	70.640	ENSCAFG00000019233	SRL	82	71.744	Canis_familiaris
ENSHCOG00000001012	SRL	54	67.076	ENSCAFG00020025024	SRL	84	53.951	Canis_lupus_dingo
ENSHCOG00000001012	SRL	50	71.018	ENSCHIG00000017927	SRL	60	68.623	Capra_hircus
ENSHCOG00000001012	SRL	50	71.523	ENSTSYG00000007919	SRL	99	72.998	Carlito_syrichta
ENSHCOG00000001012	SRL	50	71.523	ENSCPOG00000012643	SRL	94	72.627	Cavia_porcellus
ENSHCOG00000001012	SRL	50	67.550	ENSCCAG00000032646	SRL	100	73.590	Cebus_capucinus
ENSHCOG00000001012	SRL	51	72.331	ENSCATG00000032227	-	95	72.331	Cercocebus_atys
ENSHCOG00000001012	SRL	50	71.744	ENSCLAG00000016242	SRL	94	72.848	Chinchilla_lanigera
ENSHCOG00000001012	SRL	50	74.436	ENSCPBG00000026371	SRL	94	70.753	Chrysemys_picta_bellii
ENSHCOG00000001012	SRL	51	71.024	ENSCANG00000035872	SRL	99	72.769	Colobus_angolensis_palliatus
ENSHCOG00000001012	SRL	50	71.586	ENSCGRG00001016630	Srl	94	72.627	Cricetulus_griseus_chok1gshd
ENSHCOG00000001012	SRL	50	71.586	ENSCGRG00000005458	Srl	94	72.627	Cricetulus_griseus_crigri
ENSHCOG00000001012	SRL	50	74.505	ENSCSEG00000016151	srl	95	74.505	Cynoglossus_semilaevis
ENSHCOG00000001012	SRL	50	81.798	ENSCSEG00000011866	SRL	90	82.237	Cynoglossus_semilaevis
ENSHCOG00000001012	SRL	93	70.081	ENSCVAG00000022465	SRL	100	67.674	Cyprinodon_variegatus
ENSHCOG00000001012	SRL	50	74.505	ENSCVAG00000003513	srl	96	74.505	Cyprinodon_variegatus
ENSHCOG00000001012	SRL	50	76.211	ENSDARG00000104587	srl	94	76.211	Danio_rerio
ENSHCOG00000001012	SRL	50	71.082	ENSDNOG00000011643	SRL	55	70.440	Dasypus_novemcinctus
ENSHCOG00000001012	SRL	50	71.744	ENSDORG00000014807	Srl	94	72.848	Dipodomys_ordii
ENSHCOG00000001012	SRL	50	70.796	ENSEASG00005000942	SRL	53	72.124	Equus_asinus_asinus
ENSHCOG00000001012	SRL	50	70.796	ENSECAG00000024219	SRL	93	71.903	Equus_caballus
ENSHCOG00000001012	SRL	50	73.605	ENSELUG00000015616	srl	94	73.605	Esox_lucius
ENSHCOG00000001012	SRL	67	65.484	ENSELUG00000022266	SRL	93	53.977	Esox_lucius
ENSHCOG00000001012	SRL	50	70.640	ENSFCAG00000022075	SRL	93	71.744	Felis_catus
ENSHCOG00000001012	SRL	50	71.840	ENSFALG00000004328	SRL	63	72.062	Ficedula_albicollis
ENSHCOG00000001012	SRL	50	71.744	ENSFDAG00000006199	SRL	94	72.848	Fukomys_damarensis
ENSHCOG00000001012	SRL	50	74.505	ENSFHEG00000011239	srl	96	74.505	Fundulus_heteroclitus
ENSHCOG00000001012	SRL	71	73.205	ENSFHEG00000011854	SRL	99	84.211	Fundulus_heteroclitus
ENSHCOG00000001012	SRL	50	73.176	ENSGMOG00000014954	srl	100	73.176	Gadus_morhua
ENSHCOG00000001012	SRL	50	72.506	ENSGALG00000038884	SRL	93	72.506	Gallus_gallus
ENSHCOG00000001012	SRL	50	75.604	ENSGAFG00000000010	srl	96	75.604	Gambusia_affinis
ENSHCOG00000001012	SRL	69	72.556	ENSGAFG00000016984	SRL	99	84.430	Gambusia_affinis
ENSHCOG00000001012	SRL	50	72.747	ENSGACG00000011332	srl	99	72.747	Gasterosteus_aculeatus
ENSHCOG00000001012	SRL	51	71.242	ENSGGOG00000011312	-	95	72.331	Gorilla_gorilla
ENSHCOG00000001012	SRL	93	79.626	ENSHBUG00000015710	SRL	99	59.978	Haplochromis_burtoni
ENSHCOG00000001012	SRL	51	74.514	ENSHBUG00000007581	srl	99	74.514	Haplochromis_burtoni
ENSHCOG00000001012	SRL	50	71.523	ENSHGLG00000015271	SRL	94	72.627	Heterocephalus_glaber_female
ENSHCOG00000001012	SRL	50	71.523	ENSHGLG00100019378	SRL	94	72.627	Heterocephalus_glaber_male
ENSHCOG00000001012	SRL	50	72.707	ENSIPUG00000011609	SRL	100	72.707	Ictalurus_punctatus
ENSHCOG00000001012	SRL	50	74.505	ENSIPUG00000012513	srl	95	74.505	Ictalurus_punctatus
ENSHCOG00000001012	SRL	50	71.523	ENSSTOG00000021151	-	94	72.627	Ictidomys_tridecemlineatus
ENSHCOG00000001012	SRL	50	71.523	ENSJJAG00000016400	Srl	94	72.627	Jaculus_jaculus
ENSHCOG00000001012	SRL	69	78.424	ENSKMAG00000019537	SRL	100	85.841	Kryptolebias_marmoratus
ENSHCOG00000001012	SRL	50	84.735	ENSLBEG00000013811	SRL	98	83.550	Labrus_bergylta
ENSHCOG00000001012	SRL	50	75.385	ENSLBEG00000026643	srl	94	75.385	Labrus_bergylta
ENSHCOG00000001012	SRL	50	71.366	ENSLACG00000002825	SRL	98	71.366	Latimeria_chalumnae
ENSHCOG00000001012	SRL	50	74.505	ENSLOCG00000002644	srl	94	74.505	Lepisosteus_oculatus
ENSHCOG00000001012	SRL	50	70.199	ENSLAFG00000006329	SRL	50	71.523	Loxodonta_africana
ENSHCOG00000001012	SRL	51	72.331	ENSMNEG00000019236	-	95	72.331	Macaca_nemestrina
ENSHCOG00000001012	SRL	51	65.577	ENSMLEG00000032156	SRL	94	66.449	Mandrillus_leucophaeus
ENSHCOG00000001012	SRL	66	76.868	ENSMAMG00000013756	SRL	99	61.346	Mastacembelus_armatus
ENSHCOG00000001012	SRL	50	75.165	ENSMAMG00000023322	srl	94	75.165	Mastacembelus_armatus
ENSHCOG00000001012	SRL	51	74.514	ENSMZEG00005004548	srl	99	74.514	Maylandia_zebra
ENSHCOG00000001012	SRL	68	80.374	ENSMZEG00005004010	SRL	100	60.349	Maylandia_zebra
ENSHCOG00000001012	SRL	50	72.727	ENSMGAG00000009342	SRL	92	79.726	Meleagris_gallopavo
ENSHCOG00000001012	SRL	51	71.242	ENSMICG00000032307	SRL	95	72.331	Microcebus_murinus
ENSHCOG00000001012	SRL	50	71.082	ENSMOCG00000008208	Srl	94	72.185	Microtus_ochrogaster
ENSHCOG00000001012	SRL	50	82.906	ENSMMOG00000021572	SRL	99	82.906	Mola_mola
ENSHCOG00000001012	SRL	50	74.449	ENSMMOG00000013970	srl	98	74.449	Mola_mola
ENSHCOG00000001012	SRL	50	72.788	ENSMODG00000016380	-	50	73.009	Monodelphis_domestica
ENSHCOG00000001012	SRL	51	74.514	ENSMALG00000005039	srl	99	74.514	Monopterus_albus
ENSHCOG00000001012	SRL	51	72.331	MGP_CAROLIEiJ_G0020400	Srl	95	72.331	Mus_caroli
ENSHCOG00000001012	SRL	51	72.331	ENSMUSG00000022519	Srl	95	72.331	Mus_musculus
ENSHCOG00000001012	SRL	51	72.331	MGP_SPRETEiJ_G0021294	Srl	95	72.331	Mus_spretus
ENSHCOG00000001012	SRL	50	70.640	ENSMPUG00000015025	SRL	54	71.965	Mustela_putorius_furo
ENSHCOG00000001012	SRL	50	71.302	ENSMLUG00000030733	SRL	56	72.627	Myotis_lucifugus
ENSHCOG00000001012	SRL	51	71.460	ENSNGAG00000019741	Srl	95	72.549	Nannospalax_galili
ENSHCOG00000001012	SRL	50	75.385	ENSNBRG00000023775	srl	94	75.385	Neolamprologus_brichardi
ENSHCOG00000001012	SRL	95	79.626	ENSNBRG00000002422	SRL	99	59.804	Neolamprologus_brichardi
ENSHCOG00000001012	SRL	51	66.885	ENSNLEG00000029051	SRL	94	67.756	Nomascus_leucogenys
ENSHCOG00000001012	SRL	50	66.446	ENSOPRG00000000477	-	52	67.770	Ochotona_princeps
ENSHCOG00000001012	SRL	51	71.895	ENSODEG00000013256	SRL	95	72.985	Octodon_degus
ENSHCOG00000001012	SRL	50	75.604	ENSONIG00000005192	srl	94	75.604	Oreochromis_niloticus
ENSHCOG00000001012	SRL	50	74.725	ENSORLG00000008291	srl	93	75.616	Oryzias_latipes
ENSHCOG00000001012	SRL	68	84.267	ENSORLG00000015064	SRL	97	83.553	Oryzias_latipes
ENSHCOG00000001012	SRL	50	74.945	ENSORLG00020019784	srl	81	75.862	Oryzias_latipes_hni
ENSHCOG00000001012	SRL	50	83.772	ENSORLG00020018173	SRL	97	83.772	Oryzias_latipes_hni
ENSHCOG00000001012	SRL	50	74.725	ENSORLG00015009342	srl	91	74.725	Oryzias_latipes_hsok
ENSHCOG00000001012	SRL	50	83.991	ENSORLG00015019063	SRL	97	83.991	Oryzias_latipes_hsok
ENSHCOG00000001012	SRL	50	75.221	ENSOMEG00000010006	srl	98	75.221	Oryzias_melastigma
ENSHCOG00000001012	SRL	58	76.243	ENSOMEG00000005682	SRL	99	57.576	Oryzias_melastigma
ENSHCOG00000001012	SRL	51	70.524	ENSOGAG00000029266	SRL	84	55.197	Otolemur_garnettii
ENSHCOG00000001012	SRL	50	71.018	ENSOARG00000003074	SRL	55	72.124	Ovis_aries
ENSHCOG00000001012	SRL	51	71.242	ENSPPAG00000024919	-	99	72.769	Pan_paniscus
ENSHCOG00000001012	SRL	50	70.640	ENSPPRG00000010274	SRL	99	72.082	Panthera_pardus
ENSHCOG00000001012	SRL	50	70.640	ENSPTIG00000015162	SRL	99	72.082	Panthera_tigris_altaica
ENSHCOG00000001012	SRL	51	71.242	ENSPTRG00000007712	SRL	99	72.769	Pan_troglodytes
ENSHCOG00000001012	SRL	51	71.242	ENSPANG00000013804	SRL	96	72.331	Papio_anubis
ENSHCOG00000001012	SRL	60	66.004	ENSPKIG00000024974	SRL	88	74.449	Paramormyrops_kingsleyae
ENSHCOG00000001012	SRL	50	76.652	ENSPKIG00000006405	srl	93	76.652	Paramormyrops_kingsleyae
ENSHCOG00000001012	SRL	50	74.229	ENSPMGG00000021081	srl	98	72.688	Periophthalmus_magnuspinnatus
ENSHCOG00000001012	SRL	50	82.340	ENSPMGG00000023505	-	99	82.340	Periophthalmus_magnuspinnatus
ENSHCOG00000001012	SRL	50	71.523	ENSPEMG00000015842	Srl	94	72.627	Peromyscus_maniculatus_bairdii
ENSHCOG00000001012	SRL	50	72.566	ENSPCIG00000012128	SRL	96	72.566	Phascolarctos_cinereus
ENSHCOG00000001012	SRL	50	74.090	ENSPFOG00000011408	srl	94	74.090	Poecilia_formosa
ENSHCOG00000001012	SRL	69	72.978	ENSPLAG00000002932	SRL	99	83.772	Poecilia_latipinna
ENSHCOG00000001012	SRL	50	75.824	ENSPLAG00000008017	srl	96	75.824	Poecilia_latipinna
ENSHCOG00000001012	SRL	50	75.824	ENSPMEG00000006745	srl	96	75.824	Poecilia_mexicana
ENSHCOG00000001012	SRL	69	72.978	ENSPMEG00000005890	SRL	99	73.666	Poecilia_mexicana
ENSHCOG00000001012	SRL	69	73.875	ENSPREG00000000315	SRL	99	84.649	Poecilia_reticulata
ENSHCOG00000001012	SRL	50	75.604	ENSPREG00000007751	srl	98	75.604	Poecilia_reticulata
ENSHCOG00000001012	SRL	50	71.018	ENSPCAG00000003378	-	50	72.345	Procavia_capensis
ENSHCOG00000001012	SRL	51	71.460	ENSPCOG00000023135	SRL	99	73.455	Propithecus_coquereli
ENSHCOG00000001012	SRL	50	71.082	ENSPVAG00000006586	SRL	54	72.406	Pteropus_vampyrus
ENSHCOG00000001012	SRL	68	80.374	ENSPNYG00000003423	SRL	99	59.760	Pundamilia_nyererei
ENSHCOG00000001012	SRL	50	75.551	ENSPNYG00000001200	srl	97	75.551	Pundamilia_nyererei
ENSHCOG00000001012	SRL	51	78.925	ENSPNAG00000007361	-	93	78.925	Pygocentrus_nattereri
ENSHCOG00000001012	SRL	50	75.110	ENSPNAG00000023106	srl	94	75.110	Pygocentrus_nattereri
ENSHCOG00000001012	SRL	59	64.130	ENSRNOG00000005269	Srl	59	64.130	Rattus_norvegicus
ENSHCOG00000001012	SRL	51	71.242	ENSRBIG00000042358	SRL	50	72.549	Rhinopithecus_bieti
ENSHCOG00000001012	SRL	50	71.523	ENSSBOG00000029273	SRL	95	72.331	Saimiri_boliviensis_boliviensis
ENSHCOG00000001012	SRL	58	65.789	ENSSHAG00000011715	-	56	64.428	Sarcophilus_harrisii
ENSHCOG00000001012	SRL	50	75.551	ENSSFOG00015009773	srl	94	75.551	Scleropages_formosus
ENSHCOG00000001012	SRL	50	74.945	ENSSMAG00000016274	srl	97	74.945	Scophthalmus_maximus
ENSHCOG00000001012	SRL	71	68.875	ENSSMAG00000002232	SRL	100	59.343	Scophthalmus_maximus
ENSHCOG00000001012	SRL	50	75.165	ENSSDUG00000010808	srl	98	75.165	Seriola_dumerili
ENSHCOG00000001012	SRL	50	83.585	ENSSDUG00000009161	SRL	99	83.585	Seriola_dumerili
ENSHCOG00000001012	SRL	50	87.253	ENSSLDG00000014601	SRL	99	87.090	Seriola_lalandi_dorsalis
ENSHCOG00000001012	SRL	50	75.165	ENSSLDG00000022024	srl	96	75.165	Seriola_lalandi_dorsalis
ENSHCOG00000001012	SRL	50	70.705	ENSSPUG00000016859	SRL	98	70.705	Sphenodon_punctatus
ENSHCOG00000001012	SRL	50	74.725	ENSSPAG00000019105	srl	94	74.725	Stegastes_partitus
ENSHCOG00000001012	SRL	50	84.513	ENSSPAG00000014254	SRL	98	84.513	Stegastes_partitus
ENSHCOG00000001012	SRL	50	71.018	ENSSSCG00000007949	SRL	98	72.124	Sus_scrofa
ENSHCOG00000001012	SRL	50	71.840	ENSTGUG00000003951	-	97	71.840	Taeniopygia_guttata
ENSHCOG00000001012	SRL	57	84.884	ENSTRUG00000013310	SRL	97	61.957	Takifugu_rubripes
ENSHCOG00000001012	SRL	50	74.725	ENSTRUG00000006005	srl	94	74.725	Takifugu_rubripes
ENSHCOG00000001012	SRL	50	74.505	ENSTNIG00000009739	srl	94	74.505	Tetraodon_nigroviridis
ENSHCOG00000001012	SRL	55	66.270	ENSUAMG00000005701	SRL	59	67.460	Ursus_americanus
ENSHCOG00000001012	SRL	55	66.270	ENSUMAG00000002574	SRL	59	67.460	Ursus_maritimus
ENSHCOG00000001012	SRL	50	70.640	ENSVVUG00000016331	-	75	53.615	Vulpes_vulpes
ENSHCOG00000001012	SRL	50	73.348	ENSXETG00000017313	srl	99	73.085	Xenopus_tropicalis
ENSHCOG00000001012	SRL	50	84.211	ENSXCOG00000014584	SRL	99	84.211	Xiphophorus_couchianus
ENSHCOG00000001012	SRL	76	72.496	ENSXMAG00000027598	SRL	100	73.514	Xiphophorus_maculatus
ENSHCOG00000001012	SRL	50	75.385	ENSXMAG00000004625	srl	90	75.385	Xiphophorus_maculatus