EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000001027 (Gene tree)
Gene ID: 109510627
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5882 bases
Position: chrKV880532.1:1060437-1066318
Accession: 109510627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017323	dsrm	PF00035.26	2.7e-35	1	2
ENSHCOP00000017323	dsrm	PF00035.26	2.7e-35	2	2
ENSHCOP00000017323	DND1_DSRM	PF14709.7	2.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014084	-	2367	XM_019861089	ENSHCOP00000017323	345 (aa)	XP_019716648	UPI00094E4865

Gene Model

Click here to download ENSHCOG00000001027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000001027	tarbp2	93	43.519	ENSHCOG00000000168	prkra	92	43.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001027	tarbp2	100	63.388	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSHCOG00000001027	tarbp2	100	88.696	ENSAPOG00000019892	tarbp2	100	88.696	Acanthochromis_polyacanthus
ENSHCOG00000001027	tarbp2	100	63.587	ENSAMEG00000012601	TARBP2	100	64.305	Ailuropoda_melanoleuca
ENSHCOG00000001027	tarbp2	100	87.536	ENSACIG00000016780	tarbp2	100	87.536	Amphilophus_citrinellus
ENSHCOG00000001027	tarbp2	100	88.116	ENSAOCG00000005201	tarbp2	100	88.116	Amphiprion_ocellaris
ENSHCOG00000001027	tarbp2	100	88.116	ENSAPEG00000008376	tarbp2	100	88.116	Amphiprion_percula
ENSHCOG00000001027	tarbp2	100	87.246	ENSATEG00000025012	tarbp2	100	87.246	Anabas_testudineus
ENSHCOG00000001027	tarbp2	100	66.851	ENSACAG00000001100	TARBP2	100	66.851	Anolis_carolinensis
ENSHCOG00000001027	tarbp2	100	63.661	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSHCOG00000001027	tarbp2	95	87.195	ENSACLG00000018569	tarbp2	95	87.195	Astatotilapia_calliptera
ENSHCOG00000001027	tarbp2	100	79.769	ENSAMXG00000016665	tarbp2	100	79.769	Astyanax_mexicanus
ENSHCOG00000001027	tarbp2	100	64.481	ENSBTAG00000000435	TARBP2	100	65.395	Bos_taurus
ENSHCOG00000001027	tarbp2	100	63.661	ENSCJAG00000018668	TARBP2	100	63.859	Callithrix_jacchus
ENSHCOG00000001027	tarbp2	100	66.282	ENSCAFG00000006874	TARBP2	100	66.282	Canis_familiaris
ENSHCOG00000001027	tarbp2	100	63.388	ENSCAFG00020020735	TARBP2	100	65.896	Canis_lupus_dingo
ENSHCOG00000001027	tarbp2	100	64.324	ENSCHIG00000026017	TARBP2	100	64.420	Capra_hircus
ENSHCOG00000001027	tarbp2	100	63.934	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSHCOG00000001027	tarbp2	65	67.556	ENSCAPG00000008981	TARBP2	100	67.556	Cavia_aperea
ENSHCOG00000001027	tarbp2	100	64.208	ENSCPOG00000001009	TARBP2	100	64.754	Cavia_porcellus
ENSHCOG00000001027	tarbp2	97	65.169	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSHCOG00000001027	tarbp2	100	63.661	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSHCOG00000001027	tarbp2	100	63.934	ENSCLAG00000009175	TARBP2	100	63.934	Chinchilla_lanigera
ENSHCOG00000001027	tarbp2	100	63.661	ENSCSAG00000005479	TARBP2	100	64.033	Chlorocebus_sabaeus
ENSHCOG00000001027	tarbp2	100	66.759	ENSCPBG00000000654	TARBP2	100	69.118	Chrysemys_picta_bellii
ENSHCOG00000001027	tarbp2	100	63.388	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSHCOG00000001027	tarbp2	100	63.836	ENSCGRG00001011856	TARBP2	100	64.110	Cricetulus_griseus_chok1gshd
ENSHCOG00000001027	tarbp2	100	63.836	ENSCGRG00000009088	TARBP2	100	66.667	Cricetulus_griseus_crigri
ENSHCOG00000001027	tarbp2	100	84.058	ENSCSEG00000010631	tarbp2	100	84.058	Cynoglossus_semilaevis
ENSHCOG00000001027	tarbp2	100	85.507	ENSCVAG00000009832	tarbp2	100	85.507	Cyprinodon_variegatus
ENSHCOG00000001027	tarbp2	100	78.161	ENSDARG00000070471	tarbp2	100	79.023	Danio_rerio
ENSHCOG00000001027	tarbp2	100	63.043	ENSDNOG00000002144	TARBP2	100	64.305	Dasypus_novemcinctus
ENSHCOG00000001027	tarbp2	63	67.873	ENSDORG00000001390	Tarbp2	91	67.873	Dipodomys_ordii
ENSHCOG00000001027	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	82	80.612	Echinops_telfairi
ENSHCOG00000001027	tarbp2	95	59.146	ENSEBUG00000002377	tarbp2	98	60.061	Eptatretus_burgeri
ENSHCOG00000001027	tarbp2	100	63.587	ENSEASG00005010030	TARBP2	100	63.587	Equus_asinus_asinus
ENSHCOG00000001027	tarbp2	100	66.382	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSHCOG00000001027	tarbp2	84	60.577	ENSEEUG00000001128	-	99	60.577	Erinaceus_europaeus
ENSHCOG00000001027	tarbp2	100	80.747	ENSELUG00000010642	tarbp2	100	83.095	Esox_lucius
ENSHCOG00000001027	tarbp2	100	63.934	ENSFCAG00000007757	TARBP2	100	64.208	Felis_catus
ENSHCOG00000001027	tarbp2	100	64.481	ENSFDAG00000011932	TARBP2	100	67.623	Fukomys_damarensis
ENSHCOG00000001027	tarbp2	94	84.877	ENSFHEG00000016118	tarbp2	100	84.877	Fundulus_heteroclitus
ENSHCOG00000001027	tarbp2	100	82.709	ENSGMOG00000001290	tarbp2	100	82.709	Gadus_morhua
ENSHCOG00000001027	tarbp2	63	68.037	ENSGALG00000038939	-	83	68.037	Gallus_gallus
ENSHCOG00000001027	tarbp2	100	85.217	ENSGAFG00000013341	tarbp2	100	85.217	Gambusia_affinis
ENSHCOG00000001027	tarbp2	100	82.254	ENSGACG00000006645	tarbp2	100	83.473	Gasterosteus_aculeatus
ENSHCOG00000001027	tarbp2	100	67.313	ENSGAGG00000021169	TARBP2	100	67.867	Gopherus_agassizii
ENSHCOG00000001027	tarbp2	97	64.888	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSHCOG00000001027	tarbp2	100	87.826	ENSHBUG00000018639	tarbp2	100	87.826	Haplochromis_burtoni
ENSHCOG00000001027	tarbp2	100	63.934	ENSHGLG00000001284	TARBP2	100	64.208	Heterocephalus_glaber_female
ENSHCOG00000001027	tarbp2	100	63.934	ENSHGLG00100011274	TARBP2	100	64.208	Heterocephalus_glaber_male
ENSHCOG00000001027	tarbp2	100	78.510	ENSIPUG00000023701	tarbp2	100	78.510	Ictalurus_punctatus
ENSHCOG00000001027	tarbp2	97	65.730	ENSSTOG00000003678	TARBP2	100	66.803	Ictidomys_tridecemlineatus
ENSHCOG00000001027	tarbp2	100	86.087	ENSKMAG00000012142	tarbp2	100	86.087	Kryptolebias_marmoratus
ENSHCOG00000001027	tarbp2	100	85.028	ENSLBEG00000015027	tarbp2	100	85.028	Labrus_bergylta
ENSHCOG00000001027	tarbp2	95	63.415	ENSLACG00000007087	TARBP2	95	63.127	Latimeria_chalumnae
ENSHCOG00000001027	tarbp2	100	76.571	ENSLOCG00000005711	tarbp2	100	76.571	Lepisosteus_oculatus
ENSHCOG00000001027	tarbp2	72	61.314	ENSLAFG00000002620	TARBP2	95	62.313	Loxodonta_africana
ENSHCOG00000001027	tarbp2	100	63.661	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSHCOG00000001027	tarbp2	100	63.934	ENSMMUG00000018492	TARBP2	100	64.305	Macaca_mulatta
ENSHCOG00000001027	tarbp2	100	63.661	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSHCOG00000001027	tarbp2	100	63.661	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSHCOG00000001027	tarbp2	95	85.627	ENSMAMG00000010272	tarbp2	97	83.333	Mastacembelus_armatus
ENSHCOG00000001027	tarbp2	100	87.826	ENSMZEG00005006895	tarbp2	100	87.826	Maylandia_zebra
ENSHCOG00000001027	tarbp2	100	63.215	ENSMAUG00000019805	Tarbp2	100	63.836	Mesocricetus_auratus
ENSHCOG00000001027	tarbp2	94	65.507	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSHCOG00000001027	tarbp2	100	63.836	ENSMOCG00000003691	Tarbp2	100	63.836	Microtus_ochrogaster
ENSHCOG00000001027	tarbp2	94	83.283	ENSMMOG00000010374	tarbp2	100	83.283	Mola_mola
ENSHCOG00000001027	tarbp2	100	86.667	ENSMALG00000009773	tarbp2	100	86.667	Monopterus_albus
ENSHCOG00000001027	tarbp2	100	62.740	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSHCOG00000001027	tarbp2	100	62.740	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSHCOG00000001027	tarbp2	100	63.014	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSHCOG00000001027	tarbp2	100	62.740	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSHCOG00000001027	tarbp2	100	63.836	ENSMPUG00000005944	TARBP2	100	63.836	Mustela_putorius_furo
ENSHCOG00000001027	tarbp2	100	63.859	ENSMLUG00000010035	TARBP2	100	64.481	Myotis_lucifugus
ENSHCOG00000001027	tarbp2	56	80.189	ENSNBRG00000011845	-	86	80.189	Neolamprologus_brichardi
ENSHCOG00000001027	tarbp2	100	63.388	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSHCOG00000001027	tarbp2	100	66.667	ENSMEUG00000001916	TARBP2	100	66.667	Notamacropus_eugenii
ENSHCOG00000001027	tarbp2	65	68.889	ENSOPRG00000011397	TARBP2	100	68.889	Ochotona_princeps
ENSHCOG00000001027	tarbp2	60	67.556	ENSODEG00000013413	TARBP2	99	68.444	Octodon_degus
ENSHCOG00000001027	tarbp2	95	83.046	ENSONIG00000005115	tarbp2	96	83.046	Oreochromis_niloticus
ENSHCOG00000001027	tarbp2	100	64.481	ENSOCUG00000005700	TARBP2	100	64.481	Oryctolagus_cuniculus
ENSHCOG00000001027	tarbp2	100	85.507	ENSORLG00000005209	tarbp2	100	85.507	Oryzias_latipes
ENSHCOG00000001027	tarbp2	100	85.507	ENSORLG00020017755	tarbp2	100	85.507	Oryzias_latipes_hni
ENSHCOG00000001027	tarbp2	100	85.507	ENSORLG00015013237	tarbp2	100	85.507	Oryzias_latipes_hsok
ENSHCOG00000001027	tarbp2	100	85.507	ENSOMEG00000018860	tarbp2	100	85.507	Oryzias_melastigma
ENSHCOG00000001027	tarbp2	100	63.388	ENSOGAG00000001744	TARBP2	100	64.305	Otolemur_garnettii
ENSHCOG00000001027	tarbp2	100	64.208	ENSOARG00000016437	TARBP2	100	65.123	Ovis_aries
ENSHCOG00000001027	tarbp2	100	63.388	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSHCOG00000001027	tarbp2	100	63.934	ENSPPRG00000000189	TARBP2	100	64.578	Panthera_pardus
ENSHCOG00000001027	tarbp2	100	66.201	ENSPTIG00000007859	TARBP2	100	66.201	Panthera_tigris_altaica
ENSHCOG00000001027	tarbp2	100	63.388	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSHCOG00000001027	tarbp2	100	63.661	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSHCOG00000001027	tarbp2	100	75.630	ENSPKIG00000002455	tarbp2	100	75.630	Paramormyrops_kingsleyae
ENSHCOG00000001027	tarbp2	100	86.087	ENSPMGG00000006497	tarbp2	100	86.087	Periophthalmus_magnuspinnatus
ENSHCOG00000001027	tarbp2	100	63.014	ENSPEMG00000014285	Tarbp2	100	63.014	Peromyscus_maniculatus_bairdii
ENSHCOG00000001027	tarbp2	92	61.875	ENSPMAG00000000105	tarbp2	99	62.187	Petromyzon_marinus
ENSHCOG00000001027	tarbp2	100	66.474	ENSPCIG00000006672	TARBP2	92	66.474	Phascolarctos_cinereus
ENSHCOG00000001027	tarbp2	100	85.797	ENSPFOG00000007586	tarbp2	100	85.797	Poecilia_formosa
ENSHCOG00000001027	tarbp2	100	85.797	ENSPLAG00000017659	tarbp2	100	85.797	Poecilia_latipinna
ENSHCOG00000001027	tarbp2	100	85.797	ENSPMEG00000007775	tarbp2	100	85.797	Poecilia_mexicana
ENSHCOG00000001027	tarbp2	100	85.797	ENSPREG00000007815	tarbp2	100	85.797	Poecilia_reticulata
ENSHCOG00000001027	tarbp2	97	65.089	ENSPPYG00000004583	TARBP2	97	64.162	Pongo_abelii
ENSHCOG00000001027	tarbp2	78	61.092	ENSPCAG00000005352	TARBP2	58	70.892	Procavia_capensis
ENSHCOG00000001027	tarbp2	100	63.934	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSHCOG00000001027	tarbp2	100	61.680	ENSPVAG00000012286	TARBP2	100	61.680	Pteropus_vampyrus
ENSHCOG00000001027	tarbp2	100	87.536	ENSPNYG00000014125	tarbp2	100	87.536	Pundamilia_nyererei
ENSHCOG00000001027	tarbp2	100	79.480	ENSPNAG00000011128	tarbp2	100	80.347	Pygocentrus_nattereri
ENSHCOG00000001027	tarbp2	100	63.288	ENSRNOG00000042355	Tarbp2	100	63.562	Rattus_norvegicus
ENSHCOG00000001027	tarbp2	100	63.315	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSHCOG00000001027	tarbp2	100	63.315	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSHCOG00000001027	tarbp2	100	63.661	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSHCOG00000001027	tarbp2	96	66.954	ENSSHAG00000007064	TARBP2	100	68.827	Sarcophilus_harrisii
ENSHCOG00000001027	tarbp2	100	76.045	ENSSFOG00015010784	tarbp2	100	76.536	Scleropages_formosus
ENSHCOG00000001027	tarbp2	100	84.900	ENSSMAG00000012769	tarbp2	100	84.900	Scophthalmus_maximus
ENSHCOG00000001027	tarbp2	100	87.826	ENSSDUG00000018818	tarbp2	100	87.826	Seriola_dumerili
ENSHCOG00000001027	tarbp2	100	87.826	ENSSLDG00000001835	tarbp2	100	87.826	Seriola_lalandi_dorsalis
ENSHCOG00000001027	tarbp2	76	65.174	ENSSARG00000001010	TARBP2	73	65.174	Sorex_araneus
ENSHCOG00000001027	tarbp2	100	49.429	ENSSPUG00000005895	TARBP2	100	50.000	Sphenodon_punctatus
ENSHCOG00000001027	tarbp2	100	88.116	ENSSPAG00000022797	tarbp2	100	88.116	Stegastes_partitus
ENSHCOG00000001027	tarbp2	100	63.388	ENSSSCG00000000276	TARBP2	100	66.474	Sus_scrofa
ENSHCOG00000001027	tarbp2	71	52.652	ENSTGUG00000017031	TARBP2	100	52.652	Taeniopygia_guttata
ENSHCOG00000001027	tarbp2	100	86.377	ENSTRUG00000014379	tarbp2	100	86.377	Takifugu_rubripes
ENSHCOG00000001027	tarbp2	100	85.797	ENSTNIG00000007065	tarbp2	100	85.797	Tetraodon_nigroviridis
ENSHCOG00000001027	tarbp2	50	65.318	ENSTBEG00000012751	-	55	65.318	Tupaia_belangeri
ENSHCOG00000001027	tarbp2	100	63.661	ENSTTRG00000017177	TARBP2	100	64.578	Tursiops_truncatus
ENSHCOG00000001027	tarbp2	100	63.934	ENSUAMG00000009011	TARBP2	100	64.578	Ursus_americanus
ENSHCOG00000001027	tarbp2	100	63.388	ENSUMAG00000010461	TARBP2	100	64.033	Ursus_maritimus
ENSHCOG00000001027	tarbp2	100	63.388	ENSVVUG00000028150	TARBP2	100	65.896	Vulpes_vulpes
ENSHCOG00000001027	tarbp2	97	67.919	ENSXETG00000012644	tarbp2	97	67.733	Xenopus_tropicalis
ENSHCOG00000001027	tarbp2	100	85.507	ENSXMAG00000017836	tarbp2	100	85.507	Xiphophorus_maculatus