EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000001059 (Gene tree)
Gene ID: -
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3389 bases
Position: chrKV879794.1:11620-15008
Accession: 109508952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000277	Nucleoplasmin	PF03066.15	1.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014041	-	798	XM_019858879	ENSHCOP00000000277	265 (aa)	XP_019714438	-

Gene Model

Click here to download ENSHCOG00000001059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000001059	npm1a	94	40.339	ENSHCOG00000003895	npm1b	95	38.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001059	npm1a	100	57.003	ENSAPOG00000002813	npm1a	100	57.329	Acanthochromis_polyacanthus
ENSHCOG00000001059	npm1a	91	54.770	ENSACIG00000014201	npm1a	99	54.417	Amphilophus_citrinellus
ENSHCOG00000001059	npm1a	86	50.192	ENSAOCG00000004978	npm1a	100	50.958	Amphiprion_ocellaris
ENSHCOG00000001059	npm1a	100	56.209	ENSAPEG00000008594	npm1a	100	55.882	Amphiprion_percula
ENSHCOG00000001059	npm1a	100	55.975	ENSATEG00000008885	npm1a	99	55.873	Anabas_testudineus
ENSHCOG00000001059	npm1a	94	52.075	ENSACLG00000008376	npm1a	94	52.453	Astatotilapia_calliptera
ENSHCOG00000001059	npm1a	96	52.650	ENSAMXG00000010155	npm1a	98	54.064	Astyanax_mexicanus
ENSHCOG00000001059	npm1a	98	57.143	ENSCSEG00000011165	npm1a	99	56.371	Cynoglossus_semilaevis
ENSHCOG00000001059	npm1a	98	55.518	ENSCVAG00000008960	npm1a	100	55.116	Cyprinodon_variegatus
ENSHCOG00000001059	npm1a	96	49.826	ENSDARG00000014329	npm1a	96	58.125	Danio_rerio
ENSHCOG00000001059	npm1a	90	40.310	ENSEBUG00000012753	npm1a	77	41.485	Eptatretus_burgeri
ENSHCOG00000001059	npm1a	98	52.508	ENSELUG00000013705	npm1a	100	51.815	Esox_lucius
ENSHCOG00000001059	npm1a	99	53.922	ENSFHEG00000012496	npm1a	100	54.221	Fundulus_heteroclitus
ENSHCOG00000001059	npm1a	100	52.258	ENSGAFG00000013059	npm1a	100	51.935	Gambusia_affinis
ENSHCOG00000001059	npm1a	100	51.815	ENSGACG00000020319	npm1a	99	51.163	Gasterosteus_aculeatus
ENSHCOG00000001059	npm1a	98	52.484	ENSHBUG00000000776	npm1a	99	52.174	Haplochromis_burtoni
ENSHCOG00000001059	npm1a	96	54.924	ENSIPUG00000019452	npm1	99	54.545	Ictalurus_punctatus
ENSHCOG00000001059	npm1a	98	58.644	ENSKMAG00000010709	npm1a	100	57.860	Kryptolebias_marmoratus
ENSHCOG00000001059	npm1a	100	54.248	ENSLBEG00000008793	npm1a	100	54.248	Labrus_bergylta
ENSHCOG00000001059	npm1a	82	46.350	ENSLOCG00000009683	npm1a	100	47.636	Lepisosteus_oculatus
ENSHCOG00000001059	npm1a	100	58.882	ENSMAMG00000009344	npm1a	83	58.553	Mastacembelus_armatus
ENSHCOG00000001059	npm1a	98	52.025	ENSMZEG00005013717	npm1a	99	52.025	Maylandia_zebra
ENSHCOG00000001059	npm1a	93	58.741	ENSMMOG00000007980	npm1a	100	59.091	Mola_mola
ENSHCOG00000001059	npm1a	100	57.237	ENSMALG00000001146	npm1a	100	57.705	Monopterus_albus
ENSHCOG00000001059	npm1a	98	52.201	ENSNBRG00000013172	npm1a	99	51.887	Neolamprologus_brichardi
ENSHCOG00000001059	npm1a	99	49.359	ENSONIG00000001860	npm1a	99	52.427	Oreochromis_niloticus
ENSHCOG00000001059	npm1a	98	54.305	ENSORLG00000010179	npm1a	100	53.595	Oryzias_latipes
ENSHCOG00000001059	npm1a	98	54.667	ENSORLG00020020817	npm1a	100	53.618	Oryzias_latipes_hni
ENSHCOG00000001059	npm1a	98	54.305	ENSORLG00015003439	npm1a	100	53.595	Oryzias_latipes_hsok
ENSHCOG00000001059	npm1a	98	53.356	ENSOMEG00000007083	npm1a	100	52.649	Oryzias_melastigma
ENSHCOG00000001059	npm1a	100	47.756	ENSPKIG00000023943	npm1a	100	48.397	Paramormyrops_kingsleyae
ENSHCOG00000001059	npm1a	100	50.676	ENSPMGG00000011716	npm1a	100	49.662	Periophthalmus_magnuspinnatus
ENSHCOG00000001059	npm1a	99	51.645	ENSPFOG00000019173	npm1a	100	53.074	Poecilia_formosa
ENSHCOG00000001059	npm1a	99	52.159	ENSPLAG00000001093	npm1a	100	50.825	Poecilia_latipinna
ENSHCOG00000001059	npm1a	99	51.645	ENSPMEG00000012523	npm1a	100	53.074	Poecilia_mexicana
ENSHCOG00000001059	npm1a	98	53.115	ENSPREG00000001647	npm1a	100	52.427	Poecilia_reticulata
ENSHCOG00000001059	npm1a	98	54.259	ENSPNYG00000019321	npm1a	99	52.681	Pundamilia_nyererei
ENSHCOG00000001059	npm1a	96	51.515	ENSPNAG00000026891	npm1a	99	51.827	Pygocentrus_nattereri
ENSHCOG00000001059	npm1a	97	51.546	ENSSFOG00015007074	npm1a	99	51.667	Scleropages_formosus
ENSHCOG00000001059	npm1a	100	56.863	ENSSMAG00000019090	npm1a	100	56.536	Scophthalmus_maximus
ENSHCOG00000001059	npm1a	100	56.721	ENSSDUG00000015609	npm1a	100	56.393	Seriola_dumerili
ENSHCOG00000001059	npm1a	100	57.377	ENSSLDG00000017849	npm1a	100	57.049	Seriola_lalandi_dorsalis
ENSHCOG00000001059	npm1a	100	53.585	ENSSPAG00000021660	npm1a	100	53.585	Stegastes_partitus
ENSHCOG00000001059	npm1a	100	59.677	ENSTRUG00000024003	npm1a	100	60.323	Takifugu_rubripes
ENSHCOG00000001059	npm1a	100	54.636	ENSTNIG00000010773	npm1a	100	54.305	Tetraodon_nigroviridis
ENSHCOG00000001059	npm1a	98	52.364	ENSXCOG00000005958	npm1a	99	51.429	Xiphophorus_couchianus
ENSHCOG00000001059	npm1a	99	54.072	ENSXMAG00000000396	npm1a	100	54.045	Xiphophorus_maculatus