EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000001075 (Gene tree)
Gene ID: 109518578
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 12310 bases
Position: chrKV880052.1:195330-207639
Accession: 109518578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000286	RNA_pol_Rpb1_5	PF04998.17	1.5e-88	1	1
ENSHCOP00000000286	RNA_pol_Rpb1_4	PF05000.17	7.1e-32	1	1
ENSHCOP00000000286	RNA_pol_Rpb1_2	PF00623.20	1.8e-73	1	1
ENSHCOP00000000286	RNA_pol_Rpb1_3	PF04983.18	1.4e-39	1	1
ENSHCOP00000000286	RNA_pol_Rpb1_1	PF04997.12	1.3e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014029	-	4173	XM_019874525	ENSHCOP00000000286	1390 (aa)	XP_019730084	UPI00094E62B2

Gene Model

Click here to download ENSHCOG00000001075's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03020	RNA polymerase	KEGG
hcq04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000001075	polr3a	91	38.261	ENSHCOG00000011874	polr2a	67	38.261
ENSHCOG00000001075	polr3a	70	47.368	ENSHCOG00000003345	polr1a	66	47.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001075	polr3a	100	88.993	ENSG00000148606	POLR3A	98	91.139	Homo_sapiens
ENSHCOG00000001075	polr3a	62	92.683	ENSAPOG00000022727	polr3a	99	92.683	Acanthochromis_polyacanthus
ENSHCOG00000001075	polr3a	100	88.873	ENSAMEG00000017801	POLR3A	100	88.873	Ailuropoda_melanoleuca
ENSHCOG00000001075	polr3a	94	94.923	ENSACIG00000024504	polr3a	97	94.923	Amphilophus_citrinellus
ENSHCOG00000001075	polr3a	100	94.892	ENSAOCG00000002071	polr3a	100	94.892	Amphiprion_ocellaris
ENSHCOG00000001075	polr3a	100	91.583	ENSAOCG00000003949	-	100	91.583	Amphiprion_ocellaris
ENSHCOG00000001075	polr3a	100	94.748	ENSAPEG00000001966	-	100	94.748	Amphiprion_percula
ENSHCOG00000001075	polr3a	100	94.892	ENSAPEG00000013351	polr3a	100	94.892	Amphiprion_percula
ENSHCOG00000001075	polr3a	100	94.748	ENSATEG00000023277	polr3a	100	94.748	Anabas_testudineus
ENSHCOG00000001075	polr3a	99	89.455	ENSAPLG00000015878	POLR3A	99	89.455	Anas_platyrhynchos
ENSHCOG00000001075	polr3a	93	88.159	ENSACAG00000007985	POLR3A	99	88.159	Anolis_carolinensis
ENSHCOG00000001075	polr3a	100	86.422	ENSANAG00000028922	POLR3A	96	91.720	Aotus_nancymaae
ENSHCOG00000001075	polr3a	100	94.748	ENSACLG00000005914	polr3a	100	94.748	Astatotilapia_calliptera
ENSHCOG00000001075	polr3a	100	88.273	ENSAMXG00000018852	polr3a	100	88.273	Astyanax_mexicanus
ENSHCOG00000001075	polr3a	100	88.993	ENSBTAG00000013259	POLR3A	100	88.993	Bos_taurus
ENSHCOG00000001075	polr3a	99	56.512	WBGene00004411	rpc-1	99	56.512	Caenorhabditis_elegans
ENSHCOG00000001075	polr3a	100	88.777	ENSCJAG00000001015	POLR3A	100	88.777	Callithrix_jacchus
ENSHCOG00000001075	polr3a	100	88.993	ENSCAFG00000015546	POLR3A	100	88.993	Canis_familiaris
ENSHCOG00000001075	polr3a	100	88.993	ENSCAFG00020014711	POLR3A	100	88.993	Canis_lupus_dingo
ENSHCOG00000001075	polr3a	100	88.633	ENSCHIG00000000352	POLR3A	100	88.633	Capra_hircus
ENSHCOG00000001075	polr3a	100	88.489	ENSTSYG00000006671	POLR3A	100	88.489	Carlito_syrichta
ENSHCOG00000001075	polr3a	99	88.727	ENSCAPG00000016031	POLR3A	100	88.727	Cavia_aperea
ENSHCOG00000001075	polr3a	100	88.777	ENSCPOG00000022387	POLR3A	100	88.777	Cavia_porcellus
ENSHCOG00000001075	polr3a	100	87.554	ENSCCAG00000032995	POLR3A	100	87.554	Cebus_capucinus
ENSHCOG00000001075	polr3a	100	88.993	ENSCATG00000035842	POLR3A	98	91.139	Cercocebus_atys
ENSHCOG00000001075	polr3a	100	88.705	ENSCLAG00000009629	POLR3A	100	88.705	Chinchilla_lanigera
ENSHCOG00000001075	polr3a	100	88.993	ENSCSAG00000009292	POLR3A	100	88.993	Chlorocebus_sabaeus
ENSHCOG00000001075	polr3a	85	74.662	ENSCHOG00000008368	POLR3A	100	74.662	Choloepus_hoffmanni
ENSHCOG00000001075	polr3a	99	89.337	ENSCPBG00000002079	POLR3A	99	89.337	Chrysemys_picta_bellii
ENSHCOG00000001075	polr3a	99	68.732	ENSCSAVG00000009925	-	99	68.732	Ciona_savignyi
ENSHCOG00000001075	polr3a	86	84.538	ENSCANG00000041071	POLR3A	98	90.506	Colobus_angolensis_palliatus
ENSHCOG00000001075	polr3a	80	88.462	ENSCGRG00001015599	-	95	88.462	Cricetulus_griseus_chok1gshd
ENSHCOG00000001075	polr3a	88	88.270	ENSCGRG00000001019	Polr3a	100	88.270	Cricetulus_griseus_crigri
ENSHCOG00000001075	polr3a	100	94.604	ENSCSEG00000016653	polr3a	100	94.604	Cynoglossus_semilaevis
ENSHCOG00000001075	polr3a	100	94.029	ENSCVAG00000023049	polr3a	100	94.029	Cyprinodon_variegatus
ENSHCOG00000001075	polr3a	99	90.713	ENSDARG00000102569	polr3a	99	90.713	Danio_rerio
ENSHCOG00000001075	polr3a	100	88.273	ENSDNOG00000010194	POLR3A	100	88.273	Dasypus_novemcinctus
ENSHCOG00000001075	polr3a	100	88.849	ENSDORG00000000184	Polr3a	100	88.849	Dipodomys_ordii
ENSHCOG00000001075	polr3a	98	57.257	FBgn0030687	CG17209	98	57.257	Drosophila_melanogaster
ENSHCOG00000001075	polr3a	88	88.259	ENSETEG00000007477	POLR3A	89	88.259	Echinops_telfairi
ENSHCOG00000001075	polr3a	59	75.527	ENSEBUG00000013761	polr3a	98	75.527	Eptatretus_burgeri
ENSHCOG00000001075	polr3a	100	88.993	ENSEASG00005023053	POLR3A	100	88.993	Equus_asinus_asinus
ENSHCOG00000001075	polr3a	97	89.195	ENSECAG00000019416	POLR3A	100	88.785	Equus_caballus
ENSHCOG00000001075	polr3a	96	84.638	ENSEEUG00000001774	POLR3A	100	84.638	Erinaceus_europaeus
ENSHCOG00000001075	polr3a	100	89.878	ENSELUG00000014016	polr3a	100	89.878	Esox_lucius
ENSHCOG00000001075	polr3a	100	89.137	ENSFCAG00000000843	POLR3A	100	89.137	Felis_catus
ENSHCOG00000001075	polr3a	100	89.216	ENSFALG00000006913	POLR3A	100	89.216	Ficedula_albicollis
ENSHCOG00000001075	polr3a	100	88.921	ENSFDAG00000007813	POLR3A	100	88.921	Fukomys_damarensis
ENSHCOG00000001075	polr3a	92	93.905	ENSFHEG00000011922	polr3a	98	93.905	Fundulus_heteroclitus
ENSHCOG00000001075	polr3a	100	87.544	ENSGMOG00000000291	polr3a	99	87.544	Gadus_morhua
ENSHCOG00000001075	polr3a	100	89.640	ENSGALG00000004947	POLR3A	100	89.640	Gallus_gallus
ENSHCOG00000001075	polr3a	100	94.101	ENSGAFG00000005112	polr3a	100	94.101	Gambusia_affinis
ENSHCOG00000001075	polr3a	100	93.525	ENSGACG00000002304	polr3a	100	93.525	Gasterosteus_aculeatus
ENSHCOG00000001075	polr3a	95	89.326	ENSGAGG00000010386	POLR3A	98	89.326	Gopherus_agassizii
ENSHCOG00000001075	polr3a	99	87.934	ENSGGOG00000027729	POLR3A	100	89.957	Gorilla_gorilla
ENSHCOG00000001075	polr3a	100	94.748	ENSHBUG00000018098	polr3a	100	94.748	Haplochromis_burtoni
ENSHCOG00000001075	polr3a	100	88.849	ENSHGLG00000017899	POLR3A	100	88.849	Heterocephalus_glaber_female
ENSHCOG00000001075	polr3a	100	88.849	ENSHGLG00100008483	POLR3A	100	88.849	Heterocephalus_glaber_male
ENSHCOG00000001075	polr3a	100	89.065	ENSSTOG00000012983	POLR3A	100	89.065	Ictidomys_tridecemlineatus
ENSHCOG00000001075	polr3a	100	94.101	ENSKMAG00000015290	polr3a	100	94.101	Kryptolebias_marmoratus
ENSHCOG00000001075	polr3a	99	93.156	ENSLBEG00000017214	polr3a	99	93.156	Labrus_bergylta
ENSHCOG00000001075	polr3a	97	87.435	ENSLACG00000018557	POLR3A	99	87.435	Latimeria_chalumnae
ENSHCOG00000001075	polr3a	100	91.457	ENSLOCG00000004942	polr3a	100	91.457	Lepisosteus_oculatus
ENSHCOG00000001075	polr3a	100	87.491	ENSLAFG00000016719	POLR3A	100	87.491	Loxodonta_africana
ENSHCOG00000001075	polr3a	100	88.921	ENSMFAG00000032218	POLR3A	100	88.921	Macaca_fascicularis
ENSHCOG00000001075	polr3a	100	88.921	ENSMMUG00000005514	POLR3A	98	91.139	Macaca_mulatta
ENSHCOG00000001075	polr3a	99	82.630	ENSMNEG00000035163	POLR3A	99	88.612	Macaca_nemestrina
ENSHCOG00000001075	polr3a	100	85.252	ENSMLEG00000030014	POLR3A	98	91.139	Mandrillus_leucophaeus
ENSHCOG00000001075	polr3a	100	93.957	ENSMAMG00000017497	polr3a	100	93.957	Mastacembelus_armatus
ENSHCOG00000001075	polr3a	100	94.748	ENSMZEG00005000576	polr3a	100	94.748	Maylandia_zebra
ENSHCOG00000001075	polr3a	100	72.372	ENSMGAG00000005713	-	100	72.372	Meleagris_gallopavo
ENSHCOG00000001075	polr3a	100	86.906	ENSMAUG00000016247	Polr3a	100	86.906	Mesocricetus_auratus
ENSHCOG00000001075	polr3a	100	89.065	ENSMICG00000005937	POLR3A	100	90.096	Microcebus_murinus
ENSHCOG00000001075	polr3a	100	89.065	ENSMOCG00000012185	Polr3a	100	89.065	Microtus_ochrogaster
ENSHCOG00000001075	polr3a	100	93.957	ENSMMOG00000013822	polr3a	100	93.957	Mola_mola
ENSHCOG00000001075	polr3a	100	88.705	ENSMODG00000001036	POLR3A	100	88.705	Monodelphis_domestica
ENSHCOG00000001075	polr3a	100	94.173	ENSMALG00000001249	polr3a	100	94.173	Monopterus_albus
ENSHCOG00000001075	polr3a	100	88.993	MGP_CAROLIEiJ_G0019016	Polr3a	100	88.993	Mus_caroli
ENSHCOG00000001075	polr3a	100	88.993	ENSMUSG00000025280	Polr3a	100	88.993	Mus_musculus
ENSHCOG00000001075	polr3a	100	88.993	MGP_PahariEiJ_G0030029	Polr3a	100	88.993	Mus_pahari
ENSHCOG00000001075	polr3a	100	86.403	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSHCOG00000001075	polr3a	100	88.374	ENSMPUG00000003790	POLR3A	100	88.374	Mustela_putorius_furo
ENSHCOG00000001075	polr3a	100	87.914	ENSMLUG00000011522	POLR3A	100	87.914	Myotis_lucifugus
ENSHCOG00000001075	polr3a	100	87.626	ENSNGAG00000015863	Polr3a	100	87.626	Nannospalax_galili
ENSHCOG00000001075	polr3a	100	93.022	ENSNBRG00000014262	polr3a	100	93.022	Neolamprologus_brichardi
ENSHCOG00000001075	polr3a	88	82.683	ENSNLEG00000010501	POLR3A	92	82.683	Nomascus_leucogenys
ENSHCOG00000001075	polr3a	99	76.364	ENSMEUG00000012446	POLR3A	100	76.364	Notamacropus_eugenii
ENSHCOG00000001075	polr3a	100	84.532	ENSOPRG00000001880	-	100	84.532	Ochotona_princeps
ENSHCOG00000001075	polr3a	100	88.345	ENSODEG00000015146	POLR3A	100	88.345	Octodon_degus
ENSHCOG00000001075	polr3a	100	94.964	ENSONIG00000016129	polr3a	100	94.964	Oreochromis_niloticus
ENSHCOG00000001075	polr3a	98	88.240	ENSOANG00000007013	POLR3A	100	88.240	Ornithorhynchus_anatinus
ENSHCOG00000001075	polr3a	100	88.561	ENSOCUG00000012450	POLR3A	100	88.561	Oryctolagus_cuniculus
ENSHCOG00000001075	polr3a	100	94.604	ENSORLG00000008958	polr3a	100	94.604	Oryzias_latipes
ENSHCOG00000001075	polr3a	100	92.230	ENSORLG00020007525	polr3a	98	95.156	Oryzias_latipes_hni
ENSHCOG00000001075	polr3a	100	94.604	ENSORLG00015006633	polr3a	100	94.604	Oryzias_latipes_hsok
ENSHCOG00000001075	polr3a	100	94.101	ENSOMEG00000012865	polr3a	100	94.101	Oryzias_melastigma
ENSHCOG00000001075	polr3a	100	88.705	ENSOGAG00000010995	POLR3A	100	88.705	Otolemur_garnettii
ENSHCOG00000001075	polr3a	100	88.578	ENSOARG00000009656	POLR3A	100	88.578	Ovis_aries
ENSHCOG00000001075	polr3a	100	89.137	ENSPPRG00000002128	POLR3A	100	89.137	Panthera_pardus
ENSHCOG00000001075	polr3a	100	89.137	ENSPTIG00000020916	POLR3A	100	89.137	Panthera_tigris_altaica
ENSHCOG00000001075	polr3a	100	89.065	ENSPTRG00000002664	POLR3A	98	91.139	Pan_troglodytes
ENSHCOG00000001075	polr3a	100	88.921	ENSPANG00000022508	POLR3A	98	91.139	Papio_anubis
ENSHCOG00000001075	polr3a	100	91.583	ENSPKIG00000008140	polr3a	100	91.583	Paramormyrops_kingsleyae
ENSHCOG00000001075	polr3a	98	89.189	ENSPSIG00000002092	POLR3A	100	89.189	Pelodiscus_sinensis
ENSHCOG00000001075	polr3a	100	88.777	ENSPEMG00000006768	Polr3a	100	88.777	Peromyscus_maniculatus_bairdii
ENSHCOG00000001075	polr3a	100	88.633	ENSPCIG00000015842	POLR3A	100	88.633	Phascolarctos_cinereus
ENSHCOG00000001075	polr3a	54	95.034	ENSPFOG00000006458	polr3a	100	95.034	Poecilia_formosa
ENSHCOG00000001075	polr3a	100	94.245	ENSPLAG00000000997	polr3a	100	94.245	Poecilia_latipinna
ENSHCOG00000001075	polr3a	100	94.173	ENSPMEG00000006821	polr3a	100	94.173	Poecilia_mexicana
ENSHCOG00000001075	polr3a	100	94.029	ENSPREG00000002385	polr3a	100	94.029	Poecilia_reticulata
ENSHCOG00000001075	polr3a	93	88.768	ENSPPYG00000002305	POLR3A	99	88.768	Pongo_abelii
ENSHCOG00000001075	polr3a	84	77.863	ENSPCAG00000005690	POLR3A	87	77.863	Procavia_capensis
ENSHCOG00000001075	polr3a	100	88.921	ENSPCOG00000028311	POLR3A	100	88.921	Propithecus_coquereli
ENSHCOG00000001075	polr3a	100	87.554	ENSPVAG00000015553	POLR3A	100	87.554	Pteropus_vampyrus
ENSHCOG00000001075	polr3a	100	94.748	ENSPNYG00000020987	polr3a	100	94.748	Pundamilia_nyererei
ENSHCOG00000001075	polr3a	99	87.473	ENSPNAG00000006629	polr3a	99	87.473	Pygocentrus_nattereri
ENSHCOG00000001075	polr3a	100	88.921	ENSRNOG00000010008	Polr3a	100	88.921	Rattus_norvegicus
ENSHCOG00000001075	polr3a	100	85.324	ENSRBIG00000034967	POLR3A	98	91.139	Rhinopithecus_bieti
ENSHCOG00000001075	polr3a	100	88.921	ENSRROG00000025527	POLR3A	98	91.139	Rhinopithecus_roxellana
ENSHCOG00000001075	polr3a	98	50.070	YOR116C	RPO31	98	50.070	Saccharomyces_cerevisiae
ENSHCOG00000001075	polr3a	100	88.921	ENSSBOG00000022199	POLR3A	100	88.921	Saimiri_boliviensis_boliviensis
ENSHCOG00000001075	polr3a	100	88.489	ENSSHAG00000007588	POLR3A	94	88.489	Sarcophilus_harrisii
ENSHCOG00000001075	polr3a	100	92.374	ENSSFOG00015014357	polr3a	100	92.374	Scleropages_formosus
ENSHCOG00000001075	polr3a	100	93.885	ENSSMAG00000001780	polr3a	100	93.885	Scophthalmus_maximus
ENSHCOG00000001075	polr3a	100	94.964	ENSSDUG00000019840	polr3a	100	94.964	Seriola_dumerili
ENSHCOG00000001075	polr3a	100	94.820	ENSSLDG00000023908	polr3a	100	94.820	Seriola_lalandi_dorsalis
ENSHCOG00000001075	polr3a	69	89.028	ENSSARG00000009916	POLR3A	89	89.028	Sorex_araneus
ENSHCOG00000001075	polr3a	100	87.482	ENSSPUG00000013209	POLR3A	100	87.482	Sphenodon_punctatus
ENSHCOG00000001075	polr3a	100	94.892	ENSSPAG00000017712	polr3a	100	94.892	Stegastes_partitus
ENSHCOG00000001075	polr3a	100	88.993	ENSSSCG00000010327	POLR3A	100	88.993	Sus_scrofa
ENSHCOG00000001075	polr3a	100	89.209	ENSTGUG00000006423	-	100	89.209	Taeniopygia_guttata
ENSHCOG00000001075	polr3a	100	93.525	ENSTRUG00000013488	polr3a	100	93.525	Takifugu_rubripes
ENSHCOG00000001075	polr3a	100	93.678	ENSTNIG00000013151	polr3a	100	93.678	Tetraodon_nigroviridis
ENSHCOG00000001075	polr3a	71	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSHCOG00000001075	polr3a	100	82.950	ENSTTRG00000007817	POLR3A	100	82.950	Tursiops_truncatus
ENSHCOG00000001075	polr3a	100	86.691	ENSUAMG00000011283	POLR3A	100	86.691	Ursus_americanus
ENSHCOG00000001075	polr3a	100	88.993	ENSUMAG00000013913	POLR3A	100	88.993	Ursus_maritimus
ENSHCOG00000001075	polr3a	99	81.091	ENSVPAG00000003285	POLR3A	100	81.091	Vicugna_pacos
ENSHCOG00000001075	polr3a	100	88.993	ENSVVUG00000025523	POLR3A	100	88.993	Vulpes_vulpes
ENSHCOG00000001075	polr3a	86	89.307	ENSXETG00000018101	polr3a	100	89.307	Xenopus_tropicalis
ENSHCOG00000001075	polr3a	100	94.245	ENSXMAG00000015213	polr3a	100	94.245	Xiphophorus_maculatus