EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001111 (Gene tree)
Gene ID: 109511929
Gene Symbol: rbmx
Alias: fc66e11|wu:fb37c07|wu:fc66e11
Full Name: RNA binding motif protein X-linked
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6710 bases
Position: chrKV879805.1:577460-584169
Accession: 109511929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017385	RBM1CTR	PF08081.11	8e-19	1	1
ENSHCOP00000017389	RBM1CTR	PF08081.11	1.1e-17	1	1
ENSHCOP00000017389	RRM_1	PF00076.22	2.7e-24	1	1
ENSHCOP00000017385	RRM_1	PF00076.22	4.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013967	-	1478	XM_019863323	ENSHCOP00000017385	387 (aa)	XP_019718882	UPI00094F2F65
ENSHCOT00000013965	-	1450	-	ENSHCOP00000017389	286 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000001111's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001111's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001111	rbmx	100	86.986	ENSAPOG00000006496	rbmx	93	84.824	Acanthochromis_polyacanthus
ENSHCOG00000001111	rbmx	100	82.069	ENSACIG00000011576	rbmx	93	81.522	Amphilophus_citrinellus
ENSHCOG00000001111	rbmx	98	73.171	ENSACIG00000011598	rbmx	91	75.890	Amphilophus_citrinellus
ENSHCOG00000001111	rbmx	100	82.993	ENSAOCG00000020930	rbmx	93	84.140	Amphiprion_ocellaris
ENSHCOG00000001111	rbmx	100	82.993	ENSAPEG00000007316	rbmx	94	84.140	Amphiprion_percula
ENSHCOG00000001111	rbmx	100	82.993	ENSATEG00000017363	rbmx	93	84.409	Anabas_testudineus
ENSHCOG00000001111	rbmx	100	82.594	ENSACLG00000000098	rbmx	93	83.827	Astatotilapia_calliptera
ENSHCOG00000001111	rbmx	100	78.498	ENSAMXG00000019990	rbmx	93	77.297	Astyanax_mexicanus
ENSHCOG00000001111	rbmx	100	82.253	ENSCSEG00000005240	rbmx	93	84.097	Cynoglossus_semilaevis
ENSHCOG00000001111	rbmx	100	84.483	ENSCVAG00000008876	rbmx	94	83.379	Cyprinodon_variegatus
ENSHCOG00000001111	rbmx	100	77.474	ENSDARG00000014244	rbmx	100	76.871	Danio_rerio
ENSHCOG00000001111	rbmx	100	52.234	ENSEBUG00000006778	rbmx	99	51.890	Eptatretus_burgeri
ENSHCOG00000001111	rbmx	100	75.768	ENSELUG00000003600	rbmx	100	75.342	Esox_lucius
ENSHCOG00000001111	rbmx	100	83.448	ENSFHEG00000016764	rbmx	94	83.106	Fundulus_heteroclitus
ENSHCOG00000001111	rbmx	100	76.333	ENSGMOG00000004496	rbmx	93	74.934	Gadus_morhua
ENSHCOG00000001111	rbmx	100	84.138	ENSGAFG00000019917	rbmx	93	83.379	Gambusia_affinis
ENSHCOG00000001111	rbmx	100	80.471	ENSGACG00000017237	rbmx	93	80.106	Gasterosteus_aculeatus
ENSHCOG00000001111	rbmx	100	82.594	ENSHBUG00000015283	rbmx	93	83.827	Haplochromis_burtoni
ENSHCOG00000001111	rbmx	100	78.571	ENSIPUG00000022212	rbmx	93	74.797	Ictalurus_punctatus
ENSHCOG00000001111	rbmx	100	86.598	ENSKMAG00000001754	rbmx	100	85.172	Kryptolebias_marmoratus
ENSHCOG00000001111	rbmx	100	83.904	ENSLBEG00000010000	rbmx	93	82.880	Labrus_bergylta
ENSHCOG00000001111	rbmx	100	65.333	ENSLACG00000015261	rbmx	93	67.810	Latimeria_chalumnae
ENSHCOG00000001111	rbmx	100	77.409	ENSLOCG00000015142	rbmx	93	75.726	Lepisosteus_oculatus
ENSHCOG00000001111	rbmx	100	82.993	ENSMAMG00000020591	rbmx	93	83.871	Mastacembelus_armatus
ENSHCOG00000001111	rbmx	100	82.594	ENSMZEG00005006432	rbmx	87	83.565	Maylandia_zebra
ENSHCOG00000001111	rbmx	100	86.598	ENSMMOG00000001043	rbmx	93	84.824	Mola_mola
ENSHCOG00000001111	rbmx	100	75.427	ENSMALG00000009777	rbmx	93	78.167	Monopterus_albus
ENSHCOG00000001111	rbmx	100	82.594	ENSNBRG00000022154	rbmx	93	83.827	Neolamprologus_brichardi
ENSHCOG00000001111	rbmx	100	84.014	ENSONIG00000002700	rbmx	93	83.065	Oreochromis_niloticus
ENSHCOG00000001111	rbmx	100	85.223	ENSORLG00000001692	rbmx	93	81.843	Oryzias_latipes
ENSHCOG00000001111	rbmx	100	85.567	ENSORLG00020021132	rbmx	93	82.114	Oryzias_latipes_hni
ENSHCOG00000001111	rbmx	100	84.880	ENSORLG00015000330	rbmx	93	81.572	Oryzias_latipes_hsok
ENSHCOG00000001111	rbmx	100	81.787	ENSOMEG00000016787	rbmx	100	82.131	Oryzias_melastigma
ENSHCOG00000001111	rbmx	100	78.276	ENSPKIG00000024910	-	93	77.507	Paramormyrops_kingsleyae
ENSHCOG00000001111	rbmx	100	64.141	ENSPKIG00000017611	rbmx	93	63.757	Paramormyrops_kingsleyae
ENSHCOG00000001111	rbmx	100	79.094	ENSPMGG00000017906	rbmx	95	78.082	Periophthalmus_magnuspinnatus
ENSHCOG00000001111	rbmx	100	84.987	ENSPFOG00000013193	rbmx	100	84.184	Poecilia_formosa
ENSHCOG00000001111	rbmx	100	84.478	ENSPLAG00000010472	rbmx	100	83.673	Poecilia_latipinna
ENSHCOG00000001111	rbmx	100	84.987	ENSPMEG00000007579	rbmx	100	84.184	Poecilia_mexicana
ENSHCOG00000001111	rbmx	100	84.478	ENSPREG00000010279	rbmx	100	83.673	Poecilia_reticulata
ENSHCOG00000001111	rbmx	100	82.594	ENSPNYG00000012536	rbmx	93	83.827	Pundamilia_nyererei
ENSHCOG00000001111	rbmx	100	79.252	ENSPNAG00000019648	rbmx	93	77.358	Pygocentrus_nattereri
ENSHCOG00000001111	rbmx	100	72.852	ENSSFOG00015011749	-	93	70.461	Scleropages_formosus
ENSHCOG00000001111	rbmx	100	74.227	ENSSFOG00015008229	rbmx	93	77.507	Scleropages_formosus
ENSHCOG00000001111	rbmx	100	81.164	ENSSMAG00000014636	rbmx	93	82.162	Scophthalmus_maximus
ENSHCOG00000001111	rbmx	100	83.333	ENSSDUG00000000242	rbmx	93	84.409	Seriola_dumerili
ENSHCOG00000001111	rbmx	100	83.333	ENSSLDG00000021381	rbmx	93	84.409	Seriola_lalandi_dorsalis
ENSHCOG00000001111	rbmx	100	82.653	ENSSPAG00000008582	rbmx	93	83.871	Stegastes_partitus
ENSHCOG00000001111	rbmx	100	81.229	ENSTRUG00000006031	rbmx	93	83.288	Takifugu_rubripes
ENSHCOG00000001111	rbmx	100	81.034	ENSTNIG00000016844	rbmx	93	81.720	Tetraodon_nigroviridis
ENSHCOG00000001111	rbmx	67	55.273	ENSUAMG00000011752	-	85	54.008	Ursus_americanus
ENSHCOG00000001111	rbmx	67	54.909	ENSUMAG00000019276	-	85	53.586	Ursus_maritimus
ENSHCOG00000001111	rbmx	100	48.667	ENSXETG00000003481	rbmx	93	51.187	Xenopus_tropicalis
ENSHCOG00000001111	rbmx	97	75.000	ENSXCOG00000016084	rbmx	93	77.337	Xiphophorus_couchianus
ENSHCOG00000001111	rbmx	100	83.391	ENSXMAG00000013407	rbmx	93	83.379	Xiphophorus_maculatus