EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000001142 (Gene tree)
Gene ID: 109510612
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 25454 bases
Position: chrKV880532.1:563667-589120
Accession: 109510612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000336	R3H	PF01424.22	7.6e-11	1	1
ENSHCOP00000000351	R3H	PF01424.22	7.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013924	-	4185	XM_019861036	ENSHCOP00000000351	1052 (aa)	XP_019716595	-
ENSHCOT00000013934	-	4086	XM_019861048	ENSHCOP00000000336	1019 (aa)	XP_019716607	-

Gene Model

Click here to download ENSHCOG00000001142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000001142	r3hdm2	70	55.670	ENSHCOG00000013366	r3hdm1	76	60.377

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001142	r3hdm2	96	65.144	ENSG00000179912	R3HDM2	99	63.824	Homo_sapiens
ENSHCOG00000001142	r3hdm2	97	89.258	ENSAPOG00000020341	r3hdm2	100	89.844	Acanthochromis_polyacanthus
ENSHCOG00000001142	r3hdm2	51	37.608	ENSAPOG00000021873	-	69	39.425	Acanthochromis_polyacanthus
ENSHCOG00000001142	r3hdm2	92	65.324	ENSAMEG00000004812	R3HDM2	99	62.268	Ailuropoda_melanoleuca
ENSHCOG00000001142	r3hdm2	90	87.300	ENSACIG00000016146	r3hdm2	98	85.684	Amphilophus_citrinellus
ENSHCOG00000001142	r3hdm2	97	89.593	ENSAOCG00000023694	r3hdm2	100	90.161	Amphiprion_ocellaris
ENSHCOG00000001142	r3hdm2	97	89.763	ENSAPEG00000008851	r3hdm2	100	90.427	Amphiprion_percula
ENSHCOG00000001142	r3hdm2	97	88.911	ENSATEG00000025024	r3hdm2	100	90.486	Anabas_testudineus
ENSHCOG00000001142	r3hdm2	96	62.827	ENSACAG00000006388	R3HDM2	99	62.186	Anolis_carolinensis
ENSHCOG00000001142	r3hdm2	96	65.045	ENSANAG00000025397	-	99	64.075	Aotus_nancymaae
ENSHCOG00000001142	r3hdm2	93	63.843	ENSANAG00000031310	-	97	61.027	Aotus_nancymaae
ENSHCOG00000001142	r3hdm2	97	88.219	ENSACLG00000019106	r3hdm2	100	87.290	Astatotilapia_calliptera
ENSHCOG00000001142	r3hdm2	91	68.705	ENSAMXG00000017180	r3hdm2	99	69.184	Astyanax_mexicanus
ENSHCOG00000001142	r3hdm2	96	64.647	ENSBTAG00000018361	R3HDM2	99	63.681	Bos_taurus
ENSHCOG00000001142	r3hdm2	96	65.144	ENSCJAG00000007365	R3HDM2	99	63.941	Callithrix_jacchus
ENSHCOG00000001142	r3hdm2	92	66.563	ENSCAFG00000000215	R3HDM2	99	63.859	Canis_familiaris
ENSHCOG00000001142	r3hdm2	92	66.979	ENSCAFG00020023713	R3HDM2	99	63.976	Canis_lupus_dingo
ENSHCOG00000001142	r3hdm2	92	66.874	ENSCHIG00000014022	R3HDM2	99	64.075	Capra_hircus
ENSHCOG00000001142	r3hdm2	96	64.392	ENSTSYG00000001449	R3HDM2	99	63.734	Carlito_syrichta
ENSHCOG00000001142	r3hdm2	92	67.435	ENSCPOG00000009217	R3HDM2	99	63.931	Cavia_porcellus
ENSHCOG00000001142	r3hdm2	85	65.471	ENSCCAG00000026083	R3HDM2	99	65.056	Cebus_capucinus
ENSHCOG00000001142	r3hdm2	96	65.144	ENSCATG00000036929	R3HDM2	99	63.824	Cercocebus_atys
ENSHCOG00000001142	r3hdm2	92	66.867	ENSCLAG00000011997	R3HDM2	99	63.757	Chinchilla_lanigera
ENSHCOG00000001142	r3hdm2	96	65.201	ENSCSAG00000004911	R3HDM2	99	64.076	Chlorocebus_sabaeus
ENSHCOG00000001142	r3hdm2	71	63.232	ENSCHOG00000005636	R3HDM2	89	62.475	Choloepus_hoffmanni
ENSHCOG00000001142	r3hdm2	92	65.064	ENSCPBG00000013922	R3HDM2	99	62.429	Chrysemys_picta_bellii
ENSHCOG00000001142	r3hdm2	96	65.045	ENSCANG00000043807	R3HDM2	99	63.645	Colobus_angolensis_palliatus
ENSHCOG00000001142	r3hdm2	96	63.244	ENSCGRG00001017324	R3hdm2	99	60.992	Cricetulus_griseus_chok1gshd
ENSHCOG00000001142	r3hdm2	96	63.244	ENSCGRG00000003862	R3hdm2	99	60.992	Cricetulus_griseus_crigri
ENSHCOG00000001142	r3hdm2	97	87.807	ENSCSEG00000010925	r3hdm2	100	86.673	Cynoglossus_semilaevis
ENSHCOG00000001142	r3hdm2	97	85.782	ENSCVAG00000009058	r3hdm2	100	85.620	Cyprinodon_variegatus
ENSHCOG00000001142	r3hdm2	91	72.848	ENSDARG00000102610	r3hdm2	99	74.547	Danio_rerio
ENSHCOG00000001142	r3hdm2	96	64.538	ENSDNOG00000015033	R3HDM2	100	63.991	Dasypus_novemcinctus
ENSHCOG00000001142	r3hdm2	92	63.120	ENSDORG00000011462	R3hdm2	99	62.023	Dipodomys_ordii
ENSHCOG00000001142	r3hdm2	93	66.733	ENSEASG00005007091	R3HDM2	99	64.672	Equus_asinus_asinus
ENSHCOG00000001142	r3hdm2	96	65.259	ENSECAG00000003157	R3HDM2	99	63.870	Equus_caballus
ENSHCOG00000001142	r3hdm2	97	77.085	ENSELUG00000015969	r3hdm2	100	76.147	Esox_lucius
ENSHCOG00000001142	r3hdm2	100	63.216	ENSFCAG00000000192	R3HDM2	99	62.078	Felis_catus
ENSHCOG00000001142	r3hdm2	79	61.556	ENSFALG00000000255	R3HDM2	99	57.797	Ficedula_albicollis
ENSHCOG00000001142	r3hdm2	92	66.933	ENSFDAG00000019385	R3HDM2	99	63.731	Fukomys_damarensis
ENSHCOG00000001142	r3hdm2	97	86.187	ENSFHEG00000016484	r3hdm2	100	85.929	Fundulus_heteroclitus
ENSHCOG00000001142	r3hdm2	92	80.739	ENSGMOG00000007961	r3hdm2	100	80.160	Gadus_morhua
ENSHCOG00000001142	r3hdm2	96	64.004	ENSGALG00000043736	R3HDM2	99	61.059	Gallus_gallus
ENSHCOG00000001142	r3hdm2	99	87.313	ENSGAFG00000013887	r3hdm2	100	87.021	Gambusia_affinis
ENSHCOG00000001142	r3hdm2	92	88.083	ENSGACG00000006442	r3hdm2	100	87.052	Gasterosteus_aculeatus
ENSHCOG00000001142	r3hdm2	92	64.178	ENSGAGG00000017797	R3HDM2	99	60.441	Gopherus_agassizii
ENSHCOG00000001142	r3hdm2	96	64.945	ENSGGOG00000015007	R3HDM2	99	63.627	Gorilla_gorilla
ENSHCOG00000001142	r3hdm2	92	67.034	ENSHGLG00000010434	-	99	64.292	Heterocephalus_glaber_female
ENSHCOG00000001142	r3hdm2	86	60.908	ENSHGLG00000010421	-	97	58.269	Heterocephalus_glaber_female
ENSHCOG00000001142	r3hdm2	92	66.934	ENSHGLG00100004183	-	99	64.198	Heterocephalus_glaber_male
ENSHCOG00000001142	r3hdm2	92	58.756	ENSHGLG00100018871	-	98	56.263	Heterocephalus_glaber_male
ENSHCOG00000001142	r3hdm2	97	74.953	ENSIPUG00000023873	r3hdm2	100	74.766	Ictalurus_punctatus
ENSHCOG00000001142	r3hdm2	96	60.654	ENSSTOG00000013424	R3HDM2	99	58.584	Ictidomys_tridecemlineatus
ENSHCOG00000001142	r3hdm2	96	64.491	ENSJJAG00000010001	R3hdm2	99	63.343	Jaculus_jaculus
ENSHCOG00000001142	r3hdm2	97	87.228	ENSKMAG00000012695	r3hdm2	98	85.463	Kryptolebias_marmoratus
ENSHCOG00000001142	r3hdm2	100	89.249	ENSLBEG00000013115	r3hdm2	99	89.527	Labrus_bergylta
ENSHCOG00000001142	r3hdm2	92	65.579	ENSLACG00000019064	r3hdm2	100	63.944	Latimeria_chalumnae
ENSHCOG00000001142	r3hdm2	96	75.223	ENSLOCG00000005976	r3hdm2	99	74.529	Lepisosteus_oculatus
ENSHCOG00000001142	r3hdm2	96	64.455	ENSLAFG00000006510	R3HDM2	99	64.124	Loxodonta_africana
ENSHCOG00000001142	r3hdm2	96	64.945	ENSMFAG00000036385	R3HDM2	99	64.145	Macaca_fascicularis
ENSHCOG00000001142	r3hdm2	96	64.945	ENSMMUG00000021789	R3HDM2	99	64.145	Macaca_mulatta
ENSHCOG00000001142	r3hdm2	96	65.079	ENSMNEG00000025314	R3HDM2	99	64.573	Macaca_nemestrina
ENSHCOG00000001142	r3hdm2	96	65.144	ENSMLEG00000028915	R3HDM2	99	63.824	Mandrillus_leucophaeus
ENSHCOG00000001142	r3hdm2	97	88.941	ENSMAMG00000009793	r3hdm2	100	89.792	Mastacembelus_armatus
ENSHCOG00000001142	r3hdm2	97	88.720	ENSMZEG00005007319	r3hdm2	100	87.782	Maylandia_zebra
ENSHCOG00000001142	r3hdm2	96	64.427	ENSMICG00000012389	R3HDM2	99	63.209	Microcebus_murinus
ENSHCOG00000001142	r3hdm2	96	63.846	ENSMOCG00000014425	R3hdm2	99	61.142	Microtus_ochrogaster
ENSHCOG00000001142	r3hdm2	92	84.712	ENSMMOG00000007448	r3hdm2	99	82.878	Mola_mola
ENSHCOG00000001142	r3hdm2	92	82.128	ENSMALG00000010211	r3hdm2	98	87.463	Monopterus_albus
ENSHCOG00000001142	r3hdm2	92	65.631	MGP_CAROLIEiJ_G0015896	R3hdm2	99	63.233	Mus_caroli
ENSHCOG00000001142	r3hdm2	96	64.238	ENSMUSG00000025404	R3hdm2	99	63.472	Mus_musculus
ENSHCOG00000001142	r3hdm2	92	65.597	MGP_PahariEiJ_G0031189	R3hdm2	99	62.571	Mus_pahari
ENSHCOG00000001142	r3hdm2	96	64.080	MGP_SPRETEiJ_G0016722	R3hdm2	99	62.749	Mus_spretus
ENSHCOG00000001142	r3hdm2	91	64.635	ENSMPUG00000001818	R3HDM2	96	61.284	Mustela_putorius_furo
ENSHCOG00000001142	r3hdm2	96	63.962	ENSMLUG00000004980	R3HDM2	99	62.959	Myotis_lucifugus
ENSHCOG00000001142	r3hdm2	96	64.745	ENSNGAG00000018800	R3hdm2	99	63.680	Nannospalax_galili
ENSHCOG00000001142	r3hdm2	91	86.123	ENSNBRG00000004483	r3hdm2	100	86.032	Neolamprologus_brichardi
ENSHCOG00000001142	r3hdm2	96	65.045	ENSNLEG00000017351	R3HDM2	99	64.075	Nomascus_leucogenys
ENSHCOG00000001142	r3hdm2	96	54.571	ENSMEUG00000008588	R3HDM2	99	53.233	Notamacropus_eugenii
ENSHCOG00000001142	r3hdm2	96	59.109	ENSOPRG00000013670	R3HDM2	99	58.227	Ochotona_princeps
ENSHCOG00000001142	r3hdm2	97	89.940	ENSONIG00000005075	r3hdm2	100	90.040	Oreochromis_niloticus
ENSHCOG00000001142	r3hdm2	96	64.098	ENSOCUG00000013258	R3HDM2	99	63.119	Oryctolagus_cuniculus
ENSHCOG00000001142	r3hdm2	99	86.994	ENSORLG00000005502	r3hdm2	100	85.370	Oryzias_latipes
ENSHCOG00000001142	r3hdm2	97	87.726	ENSORLG00020017069	r3hdm2	100	86.723	Oryzias_latipes_hni
ENSHCOG00000001142	r3hdm2	97	87.821	ENSORLG00015012735	r3hdm2	100	86.817	Oryzias_latipes_hsok
ENSHCOG00000001142	r3hdm2	97	82.044	ENSOMEG00000018079	r3hdm2	99	80.962	Oryzias_melastigma
ENSHCOG00000001142	r3hdm2	96	62.069	ENSOGAG00000012055	R3HDM2	99	61.611	Otolemur_garnettii
ENSHCOG00000001142	r3hdm2	93	57.792	ENSOGAG00000027966	-	94	58.207	Otolemur_garnettii
ENSHCOG00000001142	r3hdm2	96	64.752	ENSOARG00000006929	R3HDM2	99	63.556	Ovis_aries
ENSHCOG00000001142	r3hdm2	96	65.144	ENSPPAG00000034395	R3HDM2	99	63.824	Pan_paniscus
ENSHCOG00000001142	r3hdm2	96	64.350	ENSPPRG00000009240	R3HDM2	99	63.014	Panthera_pardus
ENSHCOG00000001142	r3hdm2	96	64.350	ENSPTIG00000008752	R3HDM2	99	63.014	Panthera_tigris_altaica
ENSHCOG00000001142	r3hdm2	96	64.945	ENSPTRG00000046457	R3HDM2	99	64.145	Pan_troglodytes
ENSHCOG00000001142	r3hdm2	92	66.874	ENSPANG00000024002	R3HDM2	97	65.471	Papio_anubis
ENSHCOG00000001142	r3hdm2	97	79.674	ENSPKIG00000003171	r3hdm2	100	79.981	Paramormyrops_kingsleyae
ENSHCOG00000001142	r3hdm2	90	85.699	ENSPMGG00000007061	r3hdm2	99	84.278	Periophthalmus_magnuspinnatus
ENSHCOG00000001142	r3hdm2	96	63.985	ENSPEMG00000015964	R3hdm2	99	62.393	Peromyscus_maniculatus_bairdii
ENSHCOG00000001142	r3hdm2	96	64.618	ENSPCIG00000023841	R3HDM2	99	63.007	Phascolarctos_cinereus
ENSHCOG00000001142	r3hdm2	91	78.612	ENSPFOG00000006077	r3hdm2	88	91.014	Poecilia_formosa
ENSHCOG00000001142	r3hdm2	97	87.204	ENSPLAG00000002971	r3hdm2	100	86.936	Poecilia_latipinna
ENSHCOG00000001142	r3hdm2	97	87.204	ENSPMEG00000005330	r3hdm2	100	86.936	Poecilia_mexicana
ENSHCOG00000001142	r3hdm2	97	86.919	ENSPREG00000008424	r3hdm2	100	86.654	Poecilia_reticulata
ENSHCOG00000001142	r3hdm2	95	59.577	ENSPPYG00000004685	R3HDM2	81	58.724	Pongo_abelii
ENSHCOG00000001142	r3hdm2	86	79.044	ENSPCAG00000014642	R3HDM2	87	83.333	Procavia_capensis
ENSHCOG00000001142	r3hdm2	96	64.548	ENSPCOG00000013201	R3HDM2	99	63.752	Propithecus_coquereli
ENSHCOG00000001142	r3hdm2	93	65.524	ENSPVAG00000003967	R3HDM2	99	62.418	Pteropus_vampyrus
ENSHCOG00000001142	r3hdm2	91	84.810	ENSPNYG00000013479	r3hdm2	100	84.721	Pundamilia_nyererei
ENSHCOG00000001142	r3hdm2	97	74.624	ENSPNAG00000017473	r3hdm2	100	75.940	Pygocentrus_nattereri
ENSHCOG00000001142	r3hdm2	92	65.078	ENSRNOG00000007801	R3hdm2	99	62.647	Rattus_norvegicus
ENSHCOG00000001142	r3hdm2	96	63.257	ENSRBIG00000037403	R3HDM2	99	62.303	Rhinopithecus_bieti
ENSHCOG00000001142	r3hdm2	100	63.863	ENSRROG00000022271	R3HDM2	99	64.173	Rhinopithecus_roxellana
ENSHCOG00000001142	r3hdm2	96	65.144	ENSSBOG00000023547	R3HDM2	99	63.941	Saimiri_boliviensis_boliviensis
ENSHCOG00000001142	r3hdm2	96	61.842	ENSSHAG00000003511	R3HDM2	99	63.300	Sarcophilus_harrisii
ENSHCOG00000001142	r3hdm2	91	79.114	ENSSFOG00015011219	r3hdm2	99	77.532	Scleropages_formosus
ENSHCOG00000001142	r3hdm2	97	90.010	ENSSMAG00000012073	r3hdm2	100	90.490	Scophthalmus_maximus
ENSHCOG00000001142	r3hdm2	97	89.564	ENSSDUG00000019269	r3hdm2	100	90.038	Seriola_dumerili
ENSHCOG00000001142	r3hdm2	97	89.449	ENSSLDG00000005252	r3hdm2	100	90.209	Seriola_lalandi_dorsalis
ENSHCOG00000001142	r3hdm2	88	60.354	ENSSARG00000003958	R3HDM2	90	57.812	Sorex_araneus
ENSHCOG00000001142	r3hdm2	92	63.591	ENSSPUG00000014132	R3HDM2	99	60.019	Sphenodon_punctatus
ENSHCOG00000001142	r3hdm2	97	89.782	ENSSPAG00000022594	r3hdm2	100	90.066	Stegastes_partitus
ENSHCOG00000001142	r3hdm2	96	65.243	ENSSSCG00000026498	R3HDM2	100	63.094	Sus_scrofa
ENSHCOG00000001142	r3hdm2	70	61.697	ENSTGUG00000015881	R3HDM2	99	60.233	Taeniopygia_guttata
ENSHCOG00000001142	r3hdm2	92	84.271	ENSTRUG00000015075	r3hdm2	99	81.990	Takifugu_rubripes
ENSHCOG00000001142	r3hdm2	90	91.643	ENSTNIG00000007057	r3hdm2	92	91.831	Tetraodon_nigroviridis
ENSHCOG00000001142	r3hdm2	79	65.603	ENSTBEG00000015967	R3HDM2	78	63.140	Tupaia_belangeri
ENSHCOG00000001142	r3hdm2	89	68.000	ENSTTRG00000013082	R3HDM2	94	61.749	Tursiops_truncatus
ENSHCOG00000001142	r3hdm2	92	66.901	ENSUAMG00000020913	R3HDM2	99	63.387	Ursus_americanus
ENSHCOG00000001142	r3hdm2	88	65.870	ENSUMAG00000019179	R3HDM2	96	63.246	Ursus_maritimus
ENSHCOG00000001142	r3hdm2	87	77.076	ENSVPAG00000008656	R3HDM2	84	80.357	Vicugna_pacos
ENSHCOG00000001142	r3hdm2	98	63.173	ENSVVUG00000018014	R3HDM2	96	63.188	Vulpes_vulpes
ENSHCOG00000001142	r3hdm2	96	61.569	ENSXETG00000017153	r3hdm2	99	59.881	Xenopus_tropicalis
ENSHCOG00000001142	r3hdm2	84	83.900	ENSXCOG00000013882	r3hdm2	100	83.614	Xiphophorus_couchianus
ENSHCOG00000001142	r3hdm2	99	86.313	ENSXMAG00000017978	r3hdm2	100	85.397	Xiphophorus_maculatus