EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001223 (Gene tree)
Gene ID: 109507420
Gene Symbol: sf3a2
Alias: zgc:56097|zgc:77448
Full Name: splicing factor 3a subunit 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2564 bases
Position: chrKV880483.1:2316796-2319359
Accession: 109507420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000415	zf-met	PF12874.7	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013816	-	1139	XM_019856837	ENSHCOP00000000415	290 (aa)	XP_019712396	UPI00094F0ACC

Gene Model

Click here to download ENSHCOG00000001223's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001223	sf3a2	77	93.750	ENSG00000104897	SF3A2	100	97.037	Homo_sapiens
ENSHCOG00000001223	sf3a2	84	94.650	ENSAPOG00000003916	sf3a2	100	91.554	Acanthochromis_polyacanthus
ENSHCOG00000001223	sf3a2	77	93.750	ENSAMEG00000005469	SF3A2	57	87.833	Ailuropoda_melanoleuca
ENSHCOG00000001223	sf3a2	82	93.724	ENSACIG00000018153	sf3a2	100	89.796	Amphilophus_citrinellus
ENSHCOG00000001223	sf3a2	84	94.650	ENSAOCG00000015960	sf3a2	100	91.554	Amphiprion_ocellaris
ENSHCOG00000001223	sf3a2	84	94.650	ENSAPEG00000012336	sf3a2	100	91.554	Amphiprion_percula
ENSHCOG00000001223	sf3a2	84	93.416	ENSATEG00000015449	sf3a2	100	90.203	Anabas_testudineus
ENSHCOG00000001223	sf3a2	64	96.216	ENSANAG00000034031	-	89	96.216	Aotus_nancymaae
ENSHCOG00000001223	sf3a2	88	90.272	ENSACLG00000002356	sf3a2	100	89.796	Astatotilapia_calliptera
ENSHCOG00000001223	sf3a2	84	92.308	ENSAMXG00000032428	sf3a2	86	90.114	Astyanax_mexicanus
ENSHCOG00000001223	sf3a2	77	93.750	ENSBTAG00000025452	SF3A2	55	88.213	Bos_taurus
ENSHCOG00000001223	sf3a2	74	78.704	WBGene00008683	repo-1	97	78.704	Caenorhabditis_elegans
ENSHCOG00000001223	sf3a2	77	93.750	ENSCJAG00000013206	-	57	87.594	Callithrix_jacchus
ENSHCOG00000001223	sf3a2	77	93.750	ENSCAFG00000019414	SF3A2	55	88.213	Canis_familiaris
ENSHCOG00000001223	sf3a2	77	93.750	ENSCAFG00020018153	SF3A2	55	88.213	Canis_lupus_dingo
ENSHCOG00000001223	sf3a2	77	93.750	ENSCHIG00000018323	SF3A2	55	88.213	Capra_hircus
ENSHCOG00000001223	sf3a2	63	96.154	ENSCAPG00000003402	-	90	96.154	Cavia_aperea
ENSHCOG00000001223	sf3a2	77	93.750	ENSCPOG00000032868	SF3A2	59	87.594	Cavia_porcellus
ENSHCOG00000001223	sf3a2	77	93.750	ENSCCAG00000009812	SF3A2	87	95.676	Cebus_capucinus
ENSHCOG00000001223	sf3a2	77	93.750	ENSCATG00000038453	SF3A2	57	88.213	Cercocebus_atys
ENSHCOG00000001223	sf3a2	77	93.750	ENSCLAG00000008987	SF3A2	59	87.594	Chinchilla_lanigera
ENSHCOG00000001223	sf3a2	77	93.750	ENSCSAG00000011717	SF3A2	56	88.213	Chlorocebus_sabaeus
ENSHCOG00000001223	sf3a2	78	93.333	ENSCPBG00000018569	SF3A2	85	86.989	Chrysemys_picta_bellii
ENSHCOG00000001223	sf3a2	83	80.083	ENSCING00000003319	zf(matrin)-2	65	80.083	Ciona_intestinalis
ENSHCOG00000001223	sf3a2	82	78.571	ENSCSAVG00000007862	-	63	74.806	Ciona_savignyi
ENSHCOG00000001223	sf3a2	77	93.750	ENSCANG00000024451	SF3A2	57	88.213	Colobus_angolensis_palliatus
ENSHCOG00000001223	sf3a2	77	93.750	ENSCGRG00001001802	Sf3a2	54	87.452	Cricetulus_griseus_chok1gshd
ENSHCOG00000001223	sf3a2	77	93.750	ENSCGRG00000011089	Sf3a2	94	96.154	Cricetulus_griseus_crigri
ENSHCOG00000001223	sf3a2	89	92.636	ENSCSEG00000014308	sf3a2	92	91.635	Cynoglossus_semilaevis
ENSHCOG00000001223	sf3a2	88	91.016	ENSCVAG00000021349	sf3a2	90	89.434	Cyprinodon_variegatus
ENSHCOG00000001223	sf3a2	84	90.164	ENSDARG00000021107	sf3a2	94	86.312	Danio_rerio
ENSHCOG00000001223	sf3a2	77	93.304	ENSDORG00000014445	Sf3a2	57	86.842	Dipodomys_ordii
ENSHCOG00000001223	sf3a2	76	82.273	FBgn0036314	Sf3a2	98	75.290	Drosophila_melanogaster
ENSHCOG00000001223	sf3a2	77	93.750	ENSEASG00005021972	SF3A2	57	88.213	Equus_asinus_asinus
ENSHCOG00000001223	sf3a2	82	94.561	ENSELUG00000008471	sf3a2	88	91.418	Esox_lucius
ENSHCOG00000001223	sf3a2	77	93.304	ENSFCAG00000030476	SF3A2	61	87.218	Felis_catus
ENSHCOG00000001223	sf3a2	64	96.257	ENSFALG00000013785	-	61	84.615	Ficedula_albicollis
ENSHCOG00000001223	sf3a2	63	96.154	ENSFDAG00000020911	-	93	96.154	Fukomys_damarensis
ENSHCOG00000001223	sf3a2	83	93.333	ENSFHEG00000002392	sf3a2	91	89.591	Fundulus_heteroclitus
ENSHCOG00000001223	sf3a2	82	92.887	ENSGMOG00000012186	sf3a2	89	90.299	Gadus_morhua
ENSHCOG00000001223	sf3a2	74	95.833	ENSGALG00000021679	SF3A2	85	88.015	Gallus_gallus
ENSHCOG00000001223	sf3a2	83	92.917	ENSGAFG00000008478	sf3a2	91	89.219	Gambusia_affinis
ENSHCOG00000001223	sf3a2	85	94.378	ENSGACG00000015255	sf3a2	91	93.633	Gasterosteus_aculeatus
ENSHCOG00000001223	sf3a2	62	92.179	ENSGAGG00000008500	SF3A2	83	84.375	Gopherus_agassizii
ENSHCOG00000001223	sf3a2	77	93.750	ENSGGOG00000006613	SF3A2	57	88.213	Gorilla_gorilla
ENSHCOG00000001223	sf3a2	88	90.272	ENSHBUG00000021796	sf3a2	100	89.796	Haplochromis_burtoni
ENSHCOG00000001223	sf3a2	77	93.750	ENSHGLG00000015102	SF3A2	88	96.175	Heterocephalus_glaber_female
ENSHCOG00000001223	sf3a2	77	93.750	ENSHGLG00100000418	SF3A2	88	96.175	Heterocephalus_glaber_male
ENSHCOG00000001223	sf3a2	82	92.887	ENSIPUG00000019071	sf3a2	87	88.973	Ictalurus_punctatus
ENSHCOG00000001223	sf3a2	77	93.750	ENSSTOG00000007495	SF3A2	90	88.525	Ictidomys_tridecemlineatus
ENSHCOG00000001223	sf3a2	77	94.196	ENSJJAG00000010635	Sf3a2	96	95.135	Jaculus_jaculus
ENSHCOG00000001223	sf3a2	85	91.968	ENSKMAG00000006295	sf3a2	100	89.189	Kryptolebias_marmoratus
ENSHCOG00000001223	sf3a2	84	94.239	ENSLBEG00000000677	sf3a2	100	89.865	Labrus_bergylta
ENSHCOG00000001223	sf3a2	74	95.370	ENSLACG00000008744	SF3A2	85	86.517	Latimeria_chalumnae
ENSHCOG00000001223	sf3a2	80	93.534	ENSLOCG00000005835	sf3a2	86	89.139	Lepisosteus_oculatus
ENSHCOG00000001223	sf3a2	77	93.750	ENSMFAG00000002638	SF3A2	57	88.213	Macaca_fascicularis
ENSHCOG00000001223	sf3a2	77	93.750	ENSMMUG00000010111	SF3A2	57	88.213	Macaca_mulatta
ENSHCOG00000001223	sf3a2	77	93.750	ENSMNEG00000036916	SF3A2	56	88.213	Macaca_nemestrina
ENSHCOG00000001223	sf3a2	84	94.650	ENSMAMG00000009881	sf3a2	100	92.230	Mastacembelus_armatus
ENSHCOG00000001223	sf3a2	88	90.272	ENSMZEG00005025609	sf3a2	100	89.796	Maylandia_zebra
ENSHCOG00000001223	sf3a2	74	95.833	ENSMGAG00000001950	SF3A2	85	88.015	Meleagris_gallopavo
ENSHCOG00000001223	sf3a2	63	96.154	ENSMAUG00000005644	-	94	96.154	Mesocricetus_auratus
ENSHCOG00000001223	sf3a2	77	93.750	ENSMICG00000015443	SF3A2	57	87.594	Microcebus_murinus
ENSHCOG00000001223	sf3a2	77	93.750	ENSMOCG00000007216	Sf3a2	57	87.452	Microtus_ochrogaster
ENSHCOG00000001223	sf3a2	88	84.436	ENSMMOG00000010657	sf3a2	97	83.271	Mola_mola
ENSHCOG00000001223	sf3a2	74	95.370	ENSMODG00000004681	SF3A2	53	88.213	Monodelphis_domestica
ENSHCOG00000001223	sf3a2	84	93.004	ENSMALG00000020442	sf3a2	100	90.541	Monopterus_albus
ENSHCOG00000001223	sf3a2	77	93.750	MGP_CAROLIEiJ_G0015602	-	94	96.154	Mus_caroli
ENSHCOG00000001223	sf3a2	77	93.750	ENSMUSG00000020211	Sf3a2	94	96.154	Mus_musculus
ENSHCOG00000001223	sf3a2	77	93.750	MGP_PahariEiJ_G0031015	-	94	96.154	Mus_pahari
ENSHCOG00000001223	sf3a2	77	93.750	MGP_SPRETEiJ_G0016420	-	94	96.154	Mus_spretus
ENSHCOG00000001223	sf3a2	77	93.304	ENSMPUG00000006956	SF3A2	57	87.452	Mustela_putorius_furo
ENSHCOG00000001223	sf3a2	77	93.304	ENSMLUG00000004426	-	60	87.218	Myotis_lucifugus
ENSHCOG00000001223	sf3a2	63	95.604	ENSNGAG00000023309	-	94	95.604	Nannospalax_galili
ENSHCOG00000001223	sf3a2	85	91.093	ENSNBRG00000019872	sf3a2	100	89.796	Neolamprologus_brichardi
ENSHCOG00000001223	sf3a2	64	94.118	ENSODEG00000013722	-	100	94.118	Octodon_degus
ENSHCOG00000001223	sf3a2	85	91.903	ENSONIG00000010198	sf3a2	100	90.136	Oreochromis_niloticus
ENSHCOG00000001223	sf3a2	71	94.634	ENSOANG00000013649	-	98	94.175	Ornithorhynchus_anatinus
ENSHCOG00000001223	sf3a2	91	88.593	ENSORLG00000015301	sf3a2	90	88.593	Oryzias_latipes
ENSHCOG00000001223	sf3a2	91	88.593	ENSORLG00020017235	sf3a2	90	88.593	Oryzias_latipes_hni
ENSHCOG00000001223	sf3a2	90	85.714	ENSORLG00015017116	sf3a2	90	88.258	Oryzias_latipes_hsok
ENSHCOG00000001223	sf3a2	83	92.946	ENSOMEG00000020860	sf3a2	91	89.850	Oryzias_melastigma
ENSHCOG00000001223	sf3a2	77	93.750	ENSOGAG00000033389	SF3A2	57	87.594	Otolemur_garnettii
ENSHCOG00000001223	sf3a2	77	93.750	ENSOARG00000014357	SF3A2	65	87.594	Ovis_aries
ENSHCOG00000001223	sf3a2	77	78.571	ENSPPAG00000037864	-	57	74.812	Pan_paniscus
ENSHCOG00000001223	sf3a2	77	93.304	ENSPPRG00000007798	SF3A2	56	87.833	Panthera_pardus
ENSHCOG00000001223	sf3a2	77	93.750	ENSPTRG00000010227	SF3A2	57	88.213	Pan_troglodytes
ENSHCOG00000001223	sf3a2	77	93.750	ENSPANG00000007949	SF3A2	57	88.213	Papio_anubis
ENSHCOG00000001223	sf3a2	84	93.416	ENSPKIG00000009487	sf3a2	84	90.566	Paramormyrops_kingsleyae
ENSHCOG00000001223	sf3a2	78	92.511	ENSPSIG00000010839	SF3A2	85	85.978	Pelodiscus_sinensis
ENSHCOG00000001223	sf3a2	74	96.759	ENSPMGG00000017249	sf3a2	91	89.394	Periophthalmus_magnuspinnatus
ENSHCOG00000001223	sf3a2	77	93.750	ENSPEMG00000021288	Sf3a2	57	87.452	Peromyscus_maniculatus_bairdii
ENSHCOG00000001223	sf3a2	83	93.750	ENSPFOG00000015945	sf3a2	91	89.219	Poecilia_formosa
ENSHCOG00000001223	sf3a2	83	94.167	ENSPLAG00000010052	sf3a2	91	89.591	Poecilia_latipinna
ENSHCOG00000001223	sf3a2	83	93.750	ENSPMEG00000000184	sf3a2	91	89.219	Poecilia_mexicana
ENSHCOG00000001223	sf3a2	83	94.167	ENSPREG00000017808	sf3a2	91	89.591	Poecilia_reticulata
ENSHCOG00000001223	sf3a2	77	93.750	ENSPPYG00000009342	SF3A2	58	87.594	Pongo_abelii
ENSHCOG00000001223	sf3a2	68	94.898	ENSPCAG00000014513	SF3A2	57	79.087	Procavia_capensis
ENSHCOG00000001223	sf3a2	77	93.750	ENSPCOG00000020295	SF3A2	59	87.594	Propithecus_coquereli
ENSHCOG00000001223	sf3a2	88	90.272	ENSPNYG00000006928	sf3a2	100	89.796	Pundamilia_nyererei
ENSHCOG00000001223	sf3a2	84	93.004	ENSPNAG00000027582	sf3a2	89	89.552	Pygocentrus_nattereri
ENSHCOG00000001223	sf3a2	77	93.304	ENSRNOG00000019349	Sf3a2	56	87.072	Rattus_norvegicus
ENSHCOG00000001223	sf3a2	77	93.750	ENSRBIG00000026709	SF3A2	59	87.594	Rhinopithecus_bieti
ENSHCOG00000001223	sf3a2	77	93.750	ENSRROG00000034440	SF3A2	56	88.213	Rhinopithecus_roxellana
ENSHCOG00000001223	sf3a2	77	77.232	ENSSBOG00000026071	SF3A2	53	74.144	Saimiri_boliviensis_boliviensis
ENSHCOG00000001223	sf3a2	74	94.907	ENSSHAG00000011677	-	99	89.388	Sarcophilus_harrisii
ENSHCOG00000001223	sf3a2	66	85.417	ENSSHAG00000011646	-	87	78.926	Sarcophilus_harrisii
ENSHCOG00000001223	sf3a2	89	89.535	ENSSFOG00015010920	sf3a2	77	88.889	Scleropages_formosus
ENSHCOG00000001223	sf3a2	85	93.902	ENSSMAG00000002629	sf3a2	92	92.830	Scophthalmus_maximus
ENSHCOG00000001223	sf3a2	85	93.173	ENSSDUG00000015810	sf3a2	92	91.450	Seriola_dumerili
ENSHCOG00000001223	sf3a2	85	93.173	ENSSLDG00000010874	sf3a2	92	91.450	Seriola_lalandi_dorsalis
ENSHCOG00000001223	sf3a2	84	94.650	ENSSPAG00000004960	sf3a2	100	91.554	Stegastes_partitus
ENSHCOG00000001223	sf3a2	77	94.196	ENSSSCG00000039757	SF3A2	57	88.593	Sus_scrofa
ENSHCOG00000001223	sf3a2	71	95.610	ENSTGUG00000000305	SF3A2	100	95.610	Taeniopygia_guttata
ENSHCOG00000001223	sf3a2	82	96.653	ENSTRUG00000009045	sf3a2	93	92.193	Takifugu_rubripes
ENSHCOG00000001223	sf3a2	82	95.397	ENSTNIG00000015318	sf3a2	92	90.977	Tetraodon_nigroviridis
ENSHCOG00000001223	sf3a2	77	77.679	ENSTTRG00000010177	-	57	74.525	Tursiops_truncatus
ENSHCOG00000001223	sf3a2	77	93.750	ENSVVUG00000002578	SF3A2	55	88.213	Vulpes_vulpes
ENSHCOG00000001223	sf3a2	81	91.489	ENSXETG00000024943	sf3a2	65	85.502	Xenopus_tropicalis
ENSHCOG00000001223	sf3a2	83	93.750	ENSXCOG00000008222	sf3a2	91	89.850	Xiphophorus_couchianus
ENSHCOG00000001223	sf3a2	83	93.750	ENSXMAG00000029068	sf3a2	91	89.850	Xiphophorus_maculatus