EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001241 (Gene tree)
Gene ID: -
Gene Symbol: larp6a
Alias: acheron|achn|fi75f12|larp6|wu:fi75f12|zgc:66107
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 9065 bases
Position: chrKV879870.1:1277025-1286089
Accession: 109513865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000428	La	PF05383.17	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013792	-	3267	XM_019866558	ENSHCOP00000000428	515 (aa)	XP_019722117	-

Gene Model

Click here to download ENSHCOG00000001241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001241	larp6a	84	58.145	ENSG00000166173	LARP6	95	55.761	Homo_sapiens
ENSHCOG00000001241	larp6a	100	84.160	ENSAPOG00000021773	larp6a	71	87.830	Acanthochromis_polyacanthus
ENSHCOG00000001241	larp6a	83	58.904	ENSAMEG00000008897	LARP6	99	58.904	Ailuropoda_melanoleuca
ENSHCOG00000001241	larp6a	96	85.516	ENSACIG00000005166	larp6a	97	86.815	Amphilophus_citrinellus
ENSHCOG00000001241	larp6a	100	84.160	ENSAOCG00000002284	larp6a	71	87.627	Amphiprion_ocellaris
ENSHCOG00000001241	larp6a	100	84.160	ENSAPEG00000008077	larp6a	95	87.627	Amphiprion_percula
ENSHCOG00000001241	larp6a	100	83.779	ENSATEG00000004018	larp6a	70	87.221	Anabas_testudineus
ENSHCOG00000001241	larp6a	82	58.161	ENSAPLG00000009914	LARP6	99	57.931	Anas_platyrhynchos
ENSHCOG00000001241	larp6a	81	59.953	ENSACAG00000008613	LARP6	97	59.953	Anolis_carolinensis
ENSHCOG00000001241	larp6a	84	58.371	ENSANAG00000024860	LARP6	95	55.967	Aotus_nancymaae
ENSHCOG00000001241	larp6a	100	83.588	ENSACLG00000018561	larp6a	69	87.221	Astatotilapia_calliptera
ENSHCOG00000001241	larp6a	93	79.388	ENSAMXG00000029387	larp6a	74	79.796	Astyanax_mexicanus
ENSHCOG00000001241	larp6a	80	39.529	ENSAMXG00000036816	-	92	40.143	Astyanax_mexicanus
ENSHCOG00000001241	larp6a	84	59.234	ENSBTAG00000003915	LARP6	95	56.967	Bos_taurus
ENSHCOG00000001241	larp6a	89	55.236	ENSCJAG00000046236	-	95	55.031	Callithrix_jacchus
ENSHCOG00000001241	larp6a	84	58.145	ENSCJAG00000018642	-	95	55.852	Callithrix_jacchus
ENSHCOG00000001241	larp6a	83	58.904	ENSCAFG00000017616	LARP6	99	58.676	Canis_familiaris
ENSHCOG00000001241	larp6a	91	55.645	ENSCAFG00020007296	LARP6	97	56.212	Canis_lupus_dingo
ENSHCOG00000001241	larp6a	84	59.234	ENSCHIG00000013742	LARP6	95	56.967	Capra_hircus
ENSHCOG00000001241	larp6a	83	58.676	ENSTSYG00000028124	LARP6	87	58.447	Carlito_syrichta
ENSHCOG00000001241	larp6a	83	58.352	ENSCAPG00000015452	LARP6	99	58.124	Cavia_aperea
ENSHCOG00000001241	larp6a	92	54.910	ENSCPOG00000022687	LARP6	98	54.762	Cavia_porcellus
ENSHCOG00000001241	larp6a	89	55.761	ENSCCAG00000036320	LARP6	95	55.967	Cebus_capucinus
ENSHCOG00000001241	larp6a	84	58.145	ENSCATG00000042432	LARP6	95	55.761	Cercocebus_atys
ENSHCOG00000001241	larp6a	92	55.400	ENSCLAG00000007893	LARP6	97	55.400	Chinchilla_lanigera
ENSHCOG00000001241	larp6a	84	58.145	ENSCSAG00000013672	LARP6	95	55.761	Chlorocebus_sabaeus
ENSHCOG00000001241	larp6a	84	58.333	ENSCHOG00000003318	LARP6	98	55.943	Choloepus_hoffmanni
ENSHCOG00000001241	larp6a	91	59.454	ENSCPBG00000010771	LARP6	90	59.244	Chrysemys_picta_bellii
ENSHCOG00000001241	larp6a	81	58.782	ENSCANG00000025833	LARP6	98	58.548	Colobus_angolensis_palliatus
ENSHCOG00000001241	larp6a	84	59.284	ENSCGRG00001024472	Larp6	97	56.225	Cricetulus_griseus_chok1gshd
ENSHCOG00000001241	larp6a	84	59.284	ENSCGRG00000004527	Larp6	97	56.225	Cricetulus_griseus_crigri
ENSHCOG00000001241	larp6a	100	82.500	ENSCSEG00000011196	larp6a	73	85.193	Cynoglossus_semilaevis
ENSHCOG00000001241	larp6a	95	85.859	ENSCVAG00000009605	larp6a	73	85.859	Cyprinodon_variegatus
ENSHCOG00000001241	larp6a	92	80.376	ENSDARG00000005355	larp6a	99	83.063	Danio_rerio
ENSHCOG00000001241	larp6a	84	57.753	ENSDNOG00000042993	LARP6	96	55.714	Dasypus_novemcinctus
ENSHCOG00000001241	larp6a	89	54.375	ENSDORG00000023910	Larp6	95	55.925	Dipodomys_ordii
ENSHCOG00000001241	larp6a	63	61.017	ENSETEG00000020390	LARP6	74	61.017	Echinops_telfairi
ENSHCOG00000001241	larp6a	84	59.009	ENSEASG00005005490	LARP6	70	56.557	Equus_asinus_asinus
ENSHCOG00000001241	larp6a	84	59.009	ENSECAG00000014190	LARP6	96	57.906	Equus_caballus
ENSHCOG00000001241	larp6a	95	81.238	ENSELUG00000007341	larp6a	73	81.238	Esox_lucius
ENSHCOG00000001241	larp6a	86	57.048	ENSFCAG00000001361	LARP6	97	55.020	Felis_catus
ENSHCOG00000001241	larp6a	85	58.407	ENSFALG00000012389	LARP6	99	56.875	Ficedula_albicollis
ENSHCOG00000001241	larp6a	83	58.277	ENSFDAG00000019994	LARP6	84	57.727	Fukomys_damarensis
ENSHCOG00000001241	larp6a	95	85.859	ENSFHEG00000010312	larp6a	72	85.859	Fundulus_heteroclitus
ENSHCOG00000001241	larp6a	86	58.537	ENSGALG00000004046	LARP6	94	57.620	Gallus_gallus
ENSHCOG00000001241	larp6a	100	83.237	ENSGAFG00000009426	larp6a	72	85.859	Gambusia_affinis
ENSHCOG00000001241	larp6a	83	85.219	ENSGACG00000014622	larp6a	99	85.219	Gasterosteus_aculeatus
ENSHCOG00000001241	larp6a	83	57.834	ENSGAGG00000010802	LARP6	63	57.604	Gopherus_agassizii
ENSHCOG00000001241	larp6a	81	58.782	ENSGGOG00000024151	LARP6	98	58.548	Gorilla_gorilla
ENSHCOG00000001241	larp6a	100	83.397	ENSHBUG00000021014	larp6a	69	87.018	Haplochromis_burtoni
ENSHCOG00000001241	larp6a	86	58.370	ENSHGLG00000015112	LARP6	97	56.162	Heterocephalus_glaber_female
ENSHCOG00000001241	larp6a	83	58.998	ENSHGLG00100013159	LARP6	100	58.770	Heterocephalus_glaber_male
ENSHCOG00000001241	larp6a	93	76.531	ENSIPUG00000010187	larp6	74	76.735	Ictalurus_punctatus
ENSHCOG00000001241	larp6a	84	58.333	ENSSTOG00000024279	LARP6	93	58.108	Ictidomys_tridecemlineatus
ENSHCOG00000001241	larp6a	84	57.658	ENSJJAG00000011013	Larp6	96	55.533	Jaculus_jaculus
ENSHCOG00000001241	larp6a	95	86.061	ENSKMAG00000001702	larp6a	68	86.061	Kryptolebias_marmoratus
ENSHCOG00000001241	larp6a	100	82.081	ENSLBEG00000000170	larp6a	95	84.787	Labrus_bergylta
ENSHCOG00000001241	larp6a	90	62.737	ENSLACG00000018706	LARP6	89	62.737	Latimeria_chalumnae
ENSHCOG00000001241	larp6a	80	44.235	ENSLACG00000002786	-	95	45.024	Latimeria_chalumnae
ENSHCOG00000001241	larp6a	99	72.447	ENSLOCG00000014592	larp6a	72	75.205	Lepisosteus_oculatus
ENSHCOG00000001241	larp6a	80	42.118	ENSLOCG00000008547	-	80	44.418	Lepisosteus_oculatus
ENSHCOG00000001241	larp6a	84	58.333	ENSLAFG00000016343	LARP6	96	58.108	Loxodonta_africana
ENSHCOG00000001241	larp6a	84	58.145	ENSMFAG00000035507	LARP6	95	57.919	Macaca_fascicularis
ENSHCOG00000001241	larp6a	84	58.145	ENSMMUG00000004429	LARP6	96	56.276	Macaca_mulatta
ENSHCOG00000001241	larp6a	84	58.145	ENSMNEG00000045335	LARP6	95	55.761	Macaca_nemestrina
ENSHCOG00000001241	larp6a	81	58.782	ENSMLEG00000038587	LARP6	98	58.548	Mandrillus_leucophaeus
ENSHCOG00000001241	larp6a	100	83.779	ENSMAMG00000005261	larp6a	71	87.018	Mastacembelus_armatus
ENSHCOG00000001241	larp6a	100	83.588	ENSMZEG00005005774	larp6a	69	87.221	Maylandia_zebra
ENSHCOG00000001241	larp6a	82	58.986	ENSMGAG00000005077	LARP6	99	60.138	Meleagris_gallopavo
ENSHCOG00000001241	larp6a	84	58.784	ENSMAUG00000018486	Larp6	96	56.442	Mesocricetus_auratus
ENSHCOG00000001241	larp6a	84	57.432	ENSMICG00000011234	LARP6	95	55.602	Microcebus_murinus
ENSHCOG00000001241	larp6a	84	59.234	ENSMOCG00000010492	Larp6	97	56.225	Microtus_ochrogaster
ENSHCOG00000001241	larp6a	100	82.659	ENSMMOG00000016284	larp6a	97	85.801	Mola_mola
ENSHCOG00000001241	larp6a	84	56.306	ENSMODG00000009034	LARP6	92	53.971	Monodelphis_domestica
ENSHCOG00000001241	larp6a	98	82.745	ENSMALG00000014439	larp6a	93	85.744	Monopterus_albus
ENSHCOG00000001241	larp6a	91	55.711	MGP_CAROLIEiJ_G0032314	Larp6	97	55.912	Mus_caroli
ENSHCOG00000001241	larp6a	86	57.930	ENSMUSG00000034839	Larp6	97	55.711	Mus_musculus
ENSHCOG00000001241	larp6a	86	57.930	MGP_PahariEiJ_G0015180	Larp6	97	55.711	Mus_pahari
ENSHCOG00000001241	larp6a	86	58.150	MGP_SPRETEiJ_G0033452	Larp6	97	55.912	Mus_spretus
ENSHCOG00000001241	larp6a	83	58.465	ENSMPUG00000017086	LARP6	99	58.182	Mustela_putorius_furo
ENSHCOG00000001241	larp6a	84	57.883	ENSMLUG00000010319	LARP6	95	55.601	Myotis_lucifugus
ENSHCOG00000001241	larp6a	84	58.559	ENSNGAG00000014238	Larp6	96	56.442	Nannospalax_galili
ENSHCOG00000001241	larp6a	100	83.588	ENSNBRG00000008120	larp6a	95	87.221	Neolamprologus_brichardi
ENSHCOG00000001241	larp6a	84	58.145	ENSNLEG00000013691	LARP6	95	55.876	Nomascus_leucogenys
ENSHCOG00000001241	larp6a	71	64.151	ENSMEUG00000002270	LARP6	83	66.129	Notamacropus_eugenii
ENSHCOG00000001241	larp6a	69	56.077	ENSOPRG00000004868	-	99	55.525	Ochotona_princeps
ENSHCOG00000001241	larp6a	84	57.437	ENSODEG00000015958	LARP6	95	55.350	Octodon_degus
ENSHCOG00000001241	larp6a	100	83.270	ENSONIG00000002901	larp6a	95	86.869	Oreochromis_niloticus
ENSHCOG00000001241	larp6a	79	59.314	ENSOCUG00000009306	LARP6	97	58.432	Oryctolagus_cuniculus
ENSHCOG00000001241	larp6a	95	84.413	ENSORLG00000014256	larp6a	95	85.983	Oryzias_latipes
ENSHCOG00000001241	larp6a	97	83.694	ENSORLG00020019657	larp6a	72	85.193	Oryzias_latipes_hni
ENSHCOG00000001241	larp6a	97	84.283	ENSORLG00015017915	larp6a	72	85.801	Oryzias_latipes_hsok
ENSHCOG00000001241	larp6a	97	83.890	ENSOMEG00000017049	larp6a	72	85.598	Oryzias_melastigma
ENSHCOG00000001241	larp6a	90	54.303	ENSOGAG00000000522	LARP6	95	55.738	Otolemur_garnettii
ENSHCOG00000001241	larp6a	81	59.767	ENSOARG00000018750	LARP6	97	59.535	Ovis_aries
ENSHCOG00000001241	larp6a	81	58.782	ENSPPAG00000031247	LARP6	98	58.548	Pan_paniscus
ENSHCOG00000001241	larp6a	86	56.828	ENSPPRG00000011282	LARP6	97	54.819	Panthera_pardus
ENSHCOG00000001241	larp6a	83	57.631	ENSPTIG00000015318	LARP6	86	57.403	Panthera_tigris_altaica
ENSHCOG00000001241	larp6a	84	58.145	ENSPTRG00000007234	LARP6	95	55.761	Pan_troglodytes
ENSHCOG00000001241	larp6a	84	58.145	ENSPANG00000016362	LARP6	95	55.761	Papio_anubis
ENSHCOG00000001241	larp6a	96	71.595	ENSPKIG00000020103	larp6a	93	72.041	Paramormyrops_kingsleyae
ENSHCOG00000001241	larp6a	95	75.100	ENSPKIG00000004511	LARP6	74	75.100	Paramormyrops_kingsleyae
ENSHCOG00000001241	larp6a	54	69.231	ENSPSIG00000009071	LARP6	89	62.185	Pelodiscus_sinensis
ENSHCOG00000001241	larp6a	97	85.119	ENSPMGG00000006958	larp6a	98	86.089	Periophthalmus_magnuspinnatus
ENSHCOG00000001241	larp6a	90	56.098	ENSPEMG00000012909	Larp6	96	55.828	Peromyscus_maniculatus_bairdii
ENSHCOG00000001241	larp6a	84	56.823	ENSPCIG00000020765	LARP6	92	54.251	Phascolarctos_cinereus
ENSHCOG00000001241	larp6a	100	83.109	ENSPFOG00000014175	larp6a	96	85.714	Poecilia_formosa
ENSHCOG00000001241	larp6a	100	83.430	ENSPLAG00000011105	larp6a	71	86.061	Poecilia_latipinna
ENSHCOG00000001241	larp6a	100	83.237	ENSPMEG00000011085	larp6a	71	85.859	Poecilia_mexicana
ENSHCOG00000001241	larp6a	100	82.115	ENSPREG00000008067	larp6a	71	85.484	Poecilia_reticulata
ENSHCOG00000001241	larp6a	84	58.145	ENSPPYG00000006604	LARP6	95	55.761	Pongo_abelii
ENSHCOG00000001241	larp6a	60	61.404	ENSPCAG00000014197	LARP6	74	60.819	Procavia_capensis
ENSHCOG00000001241	larp6a	84	57.658	ENSPCOG00000022934	LARP6	95	55.901	Propithecus_coquereli
ENSHCOG00000001241	larp6a	84	58.559	ENSPVAG00000005618	LARP6	95	56.315	Pteropus_vampyrus
ENSHCOG00000001241	larp6a	100	83.588	ENSPNYG00000009835	larp6a	95	87.221	Pundamilia_nyererei
ENSHCOG00000001241	larp6a	96	77.624	ENSPNAG00000017966	larp6a	80	79.959	Pygocentrus_nattereri
ENSHCOG00000001241	larp6a	86	59.292	ENSRNOG00000012438	Larp6	97	56.827	Rattus_norvegicus
ENSHCOG00000001241	larp6a	81	59.112	ENSRBIG00000032902	LARP6	86	58.879	Rhinopithecus_bieti
ENSHCOG00000001241	larp6a	84	58.371	ENSRROG00000043074	LARP6	95	55.967	Rhinopithecus_roxellana
ENSHCOG00000001241	larp6a	81	59.016	ENSSBOG00000024190	LARP6	98	58.782	Saimiri_boliviensis_boliviensis
ENSHCOG00000001241	larp6a	83	56.322	ENSSHAG00000018495	LARP6	99	56.092	Sarcophilus_harrisii
ENSHCOG00000001241	larp6a	92	71.488	ENSSFOG00015002254	LARP6	92	72.537	Scleropages_formosus
ENSHCOG00000001241	larp6a	84	75.744	ENSSFOG00015023268	larp6a	95	70.909	Scleropages_formosus
ENSHCOG00000001241	larp6a	100	83.044	ENSSMAG00000009953	larp6a	70	85.801	Scophthalmus_maximus
ENSHCOG00000001241	larp6a	100	84.038	ENSSDUG00000007438	larp6a	70	86.613	Seriola_dumerili
ENSHCOG00000001241	larp6a	100	83.588	ENSSLDG00000016647	larp6a	70	86.789	Seriola_lalandi_dorsalis
ENSHCOG00000001241	larp6a	81	60.941	ENSSPUG00000011312	LARP6	98	60.706	Sphenodon_punctatus
ENSHCOG00000001241	larp6a	100	84.351	ENSSPAG00000020502	larp6a	71	87.830	Stegastes_partitus
ENSHCOG00000001241	larp6a	84	59.009	ENSSSCG00000004974	LARP6	95	56.557	Sus_scrofa
ENSHCOG00000001241	larp6a	81	59.155	ENSTGUG00000005808	LARP6	98	59.155	Taeniopygia_guttata
ENSHCOG00000001241	larp6a	100	81.226	ENSTRUG00000003151	larp6a	73	84.073	Takifugu_rubripes
ENSHCOG00000001241	larp6a	94	81.481	ENSTNIG00000011926	larp6a	100	81.481	Tetraodon_nigroviridis
ENSHCOG00000001241	larp6a	80	58.216	ENSTBEG00000015077	LARP6	98	58.216	Tupaia_belangeri
ENSHCOG00000001241	larp6a	83	58.676	ENSUAMG00000010467	LARP6	85	58.447	Ursus_americanus
ENSHCOG00000001241	larp6a	83	58.676	ENSVVUG00000015227	LARP6	94	58.447	Vulpes_vulpes
ENSHCOG00000001241	larp6a	91	61.746	ENSXETG00000020340	larp6	94	61.538	Xenopus_tropicalis
ENSHCOG00000001241	larp6a	92	86.875	ENSXCOG00000012654	larp6a	98	86.875	Xiphophorus_couchianus
ENSHCOG00000001241	larp6a	100	84.008	ENSXMAG00000021015	larp6a	68	86.465	Xiphophorus_maculatus