EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000001292 (Gene tree)
Gene ID: 109525310
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF8.2DB-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10861 bases
Position: chrKV880238.1:187421-198281
Accession: 109525310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000470	zf-C2H2	PF00096.26	9.6e-38	1	6
ENSHCOP00000000470	zf-C2H2	PF00096.26	9.6e-38	2	6
ENSHCOP00000000470	zf-C2H2	PF00096.26	9.6e-38	3	6
ENSHCOP00000000470	zf-C2H2	PF00096.26	9.6e-38	4	6
ENSHCOP00000000470	zf-C2H2	PF00096.26	9.6e-38	5	6
ENSHCOP00000000470	zf-C2H2	PF00096.26	9.6e-38	6	6
ENSHCOP00000017460	zf-C2H2	PF00096.26	1.6e-37	1	6
ENSHCOP00000017460	zf-C2H2	PF00096.26	1.6e-37	2	6
ENSHCOP00000017460	zf-C2H2	PF00096.26	1.6e-37	3	6
ENSHCOP00000017460	zf-C2H2	PF00096.26	1.6e-37	4	6
ENSHCOP00000017460	zf-C2H2	PF00096.26	1.6e-37	5	6
ENSHCOP00000017460	zf-C2H2	PF00096.26	1.6e-37	6	6
ENSHCOP00000000470	zf-met	PF12874.7	1.8e-14	1	2
ENSHCOP00000000470	zf-met	PF12874.7	1.8e-14	2	2
ENSHCOP00000017460	zf-met	PF12874.7	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013729	-	1319	XM_019885732	ENSHCOP00000017460	359 (aa)	XP_019741291	UPI00094EE063
ENSHCOT00000013725	-	1416	-	ENSHCOP00000000470	328 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000001292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001292's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000001292	-	67	50.625	ENSHCOG00000008906	-	85	51.042
ENSHCOG00000001292	-	86	37.681	ENSHCOG00000008205	-	77	51.020
ENSHCOG00000001292	-	86	51.337	ENSHCOG00000020848	-	97	52.308
ENSHCOG00000001292	-	95	40.303	ENSHCOG00000020846	-	60	50.262
ENSHCOG00000001292	-	88	58.503	ENSHCOG00000000627	-	51	58.503
ENSHCOG00000001292	-	89	55.497	ENSHCOG00000015441	-	77	54.872
ENSHCOG00000001292	-	86	53.543	ENSHCOG00000001318	-	99	55.838
ENSHCOG00000001292	-	97	46.307	ENSHCOG00000000947	-	100	44.693
ENSHCOG00000001292	-	88	54.872	ENSHCOG00000001638	-	94	54.872
ENSHCOG00000001292	-	91	52.027	ENSHCOG00000001631	-	99	52.027
ENSHCOG00000001292	-	86	53.472	ENSHCOG00000012592	-	57	53.472
ENSHCOG00000001292	-	70	53.371	ENSHCOG00000001883	-	83	53.371
ENSHCOG00000001292	-	99	40.476	ENSHCOG00000014887	-	69	65.217
ENSHCOG00000001292	-	96	45.133	ENSHCOG00000014881	-	74	45.133
ENSHCOG00000001292	-	86	53.684	ENSHCOG00000019385	-	90	53.093
ENSHCOG00000001292	-	96	50.575	ENSHCOG00000019389	-	97	49.438
ENSHCOG00000001292	-	96	52.294	ENSHCOG00000009103	-	100	52.294
ENSHCOG00000001292	-	86	51.261	ENSHCOG00000013489	-	96	51.759
ENSHCOG00000001292	-	96	59.091	ENSHCOG00000014797	-	100	59.091
ENSHCOG00000001292	-	89	51.064	ENSHCOG00000014796	-	95	53.191
ENSHCOG00000001292	-	86	48.944	ENSHCOG00000014792	-	73	48.327
ENSHCOG00000001292	-	69	40.719	ENSHCOG00000012131	prdm5	79	42.708
ENSHCOG00000001292	-	86	56.667	ENSHCOG00000019465	-	87	58.042
ENSHCOG00000001292	-	96	47.518	ENSHCOG00000014855	-	55	53.704
ENSHCOG00000001292	-	86	49.593	ENSHCOG00000014850	-	53	49.593
ENSHCOG00000001292	-	86	51.295	ENSHCOG00000020909	-	89	50.761
ENSHCOG00000001292	-	69	56.805	ENSHCOG00000007681	-	90	56.069
ENSHCOG00000001292	-	87	53.927	ENSHCOG00000015425	-	78	53.514
ENSHCOG00000001292	-	97	45.634	ENSHCOG00000001272	-	90	77.358
ENSHCOG00000001292	-	70	56.021	ENSHCOG00000012662	-	92	54.359
ENSHCOG00000001292	-	80	54.974	ENSHCOG00000015105	-	92	55.435
ENSHCOG00000001292	-	86	54.545	ENSHCOG00000008550	-	80	54.545
ENSHCOG00000001292	-	79	48.276	ENSHCOG00000014986	-	84	52.308
ENSHCOG00000001292	-	59	53.476	ENSHCOG00000001423	-	55	49.533
ENSHCOG00000001292	-	86	55.497	ENSHCOG00000007485	-	97	57.143
ENSHCOG00000001292	-	88	54.438	ENSHCOG00000020856	-	98	54.438
ENSHCOG00000001292	-	60	34.959	ENSHCOG00000020556	-	66	34.959
ENSHCOG00000001292	-	73	47.959	ENSHCOG00000017456	-	87	52.907
ENSHCOG00000001292	-	58	46.053	ENSHCOG00000016704	scrt1b	52	43.529
ENSHCOG00000001292	-	64	49.485	ENSHCOG00000001629	-	65	49.485
ENSHCOG00000001292	-	86	50.382	ENSHCOG00000015484	-	55	53.333
ENSHCOG00000001292	-	98	50.769	ENSHCOG00000021073	-	88	55.172
ENSHCOG00000001292	-	96	54.359	ENSHCOG00000007664	-	97	58.031
ENSHCOG00000001292	-	91	53.901	ENSHCOG00000020976	-	99	53.901
ENSHCOG00000001292	-	74	55.497	ENSHCOG00000020972	-	92	56.614
ENSHCOG00000001292	-	72	44.565	ENSHCOG00000007358	-	88	44.565
ENSHCOG00000001292	-	89	50.000	ENSHCOG00000015000	-	98	50.000
ENSHCOG00000001292	-	86	55.200	ENSHCOG00000015003	-	99	55.200
ENSHCOG00000001292	-	83	55.952	ENSHCOG00000015005	-	87	50.505
ENSHCOG00000001292	-	96	41.451	ENSHCOG00000008133	-	96	48.193
ENSHCOG00000001292	-	82	54.872	ENSHCOG00000012175	-	91	54.872
ENSHCOG00000001292	-	66	46.154	ENSHCOG00000015246	-	63	48.101
ENSHCOG00000001292	-	93	39.423	ENSHCOG00000015241	-	71	46.835
ENSHCOG00000001292	-	67	30.093	ENSHCOG00000014890	znf646	69	30.093
ENSHCOG00000001292	-	97	42.667	ENSHCOG00000008227	-	93	42.667
ENSHCOG00000001292	-	96	53.125	ENSHCOG00000014999	-	98	53.125
ENSHCOG00000001292	-	86	52.071	ENSHCOG00000015463	-	98	42.733
ENSHCOG00000001292	-	70	55.959	ENSHCOG00000011411	-	80	55.959
ENSHCOG00000001292	-	95	42.767	ENSHCOG00000015237	-	70	42.767
ENSHCOG00000001292	-	71	39.062	ENSHCOG00000015231	-	64	39.062
ENSHCOG00000001292	-	73	53.757	ENSHCOG00000015497	-	79	53.757
ENSHCOG00000001292	-	96	50.360	ENSHCOG00000019006	-	99	40.331
ENSHCOG00000001292	-	62	52.475	ENSHCOG00000019001	-	58	52.475
ENSHCOG00000001292	-	98	47.414	ENSHCOG00000001942	-	93	50.296
ENSHCOG00000001292	-	59	37.778	ENSHCOG00000008686	-	88	37.778
ENSHCOG00000001292	-	59	54.667	ENSHCOG00000008601	-	78	54.667
ENSHCOG00000001292	-	58	43.182	ENSHCOG00000016179	-	77	43.182
ENSHCOG00000001292	-	86	49.405	ENSHCOG00000015010	-	76	48.000
ENSHCOG00000001292	-	64	54.144	ENSHCOG00000019481	-	81	54.144
ENSHCOG00000001292	-	90	50.704	ENSHCOG00000014874	-	73	50.588
ENSHCOG00000001292	-	86	55.556	ENSHCOG00000013455	-	89	55.556
ENSHCOG00000001292	-	68	53.846	ENSHCOG00000003021	-	58	53.846
ENSHCOG00000001292	-	59	53.125	ENSHCOG00000019438	-	88	52.551
ENSHCOG00000001292	-	72	35.417	ENSHCOG00000019435	SNAI2	67	36.885
ENSHCOG00000001292	-	84	56.545	ENSHCOG00000015355	-	93	56.742
ENSHCOG00000001292	-	99	51.786	ENSHCOG00000008234	-	98	48.947
ENSHCOG00000001292	-	83	47.508	ENSHCOG00000008742	-	98	46.599
ENSHCOG00000001292	-	95	53.846	ENSHCOG00000020879	-	71	53.846
ENSHCOG00000001292	-	88	46.012	ENSHCOG00000019541	-	99	42.424
ENSHCOG00000001292	-	88	54.974	ENSHCOG00000014713	-	99	54.974
ENSHCOG00000001292	-	80	48.718	ENSHCOG00000010282	znf236	57	48.718
ENSHCOG00000001292	-	73	37.126	ENSHCOG00000006286	ZNF319	87	37.126
ENSHCOG00000001292	-	66	57.592	ENSHCOG00000015476	-	91	56.923
ENSHCOG00000001292	-	58	41.718	ENSHCOG00000019555	GFI1	52	41.718
ENSHCOG00000001292	-	85	51.232	ENSHCOG00000001345	-	96	51.232
ENSHCOG00000001292	-	60	45.789	ENSHCOG00000017431	zbtb24	53	42.593
ENSHCOG00000001292	-	59	57.692	ENSHCOG00000017437	-	83	55.682
ENSHCOG00000001292	-	71	40.465	ENSHCOG00000000511	-	80	37.838
ENSHCOG00000001292	-	89	50.785	ENSHCOG00000000517	-	88	50.256
ENSHCOG00000001292	-	60	53.093	ENSHCOG00000020984	-	82	53.093
ENSHCOG00000001292	-	99	33.898	ENSHCOG00000008181	-	97	36.598
ENSHCOG00000001292	-	89	54.974	ENSHCOG00000019512	-	92	57.068
ENSHCOG00000001292	-	86	55.497	ENSHCOG00000003085	-	85	54.872
ENSHCOG00000001292	-	58	51.667	ENSHCOG00000020670	-	73	51.667
ENSHCOG00000001292	-	82	52.062	ENSHCOG00000001338	-	93	52.062
ENSHCOG00000001292	-	86	51.462	ENSHCOG00000014777	-	79	53.403
ENSHCOG00000001292	-	91	59.162	ENSHCOG00000019497	-	81	59.162
ENSHCOG00000001292	-	88	50.610	ENSHCOG00000001793	-	67	52.308
ENSHCOG00000001292	-	84	55.497	ENSHCOG00000021033	-	89	54.872
ENSHCOG00000001292	-	60	43.038	ENSHCOG00000001901	si:dkey-89b17.4	62	43.038
ENSHCOG00000001292	-	58	43.038	ENSHCOG00000003407	snai1a	61	43.038
ENSHCOG00000001292	-	89	53.333	ENSHCOG00000020993	-	98	53.333
ENSHCOG00000001292	-	96	49.138	ENSHCOG00000001870	-	97	51.852
ENSHCOG00000001292	-	86	54.545	ENSHCOG00000001873	-	80	54.545
ENSHCOG00000001292	-	95	56.250	ENSHCOG00000020924	-	60	56.250
ENSHCOG00000001292	-	92	41.290	ENSHCOG00000010332	-	62	41.290
ENSHCOG00000001292	-	69	56.429	ENSHCOG00000001252	-	97	55.495
ENSHCOG00000001292	-	95	56.287	ENSHCOG00000001256	-	95	56.410
ENSHCOG00000001292	-	62	37.113	ENSHCOG00000002898	-	56	37.113
ENSHCOG00000001292	-	74	55.497	ENSHCOG00000008168	-	96	57.143
ENSHCOG00000001292	-	86	47.350	ENSHCOG00000011433	-	86	55.491
ENSHCOG00000001292	-	59	57.068	ENSHCOG00000020725	-	67	56.995
ENSHCOG00000001292	-	87	55.294	ENSHCOG00000011432	-	96	50.472
ENSHCOG00000001292	-	86	52.222	ENSHCOG00000000138	-	60	56.842
ENSHCOG00000001292	-	66	41.436	ENSHCOG00000018201	-	80	40.099
ENSHCOG00000001292	-	91	54.545	ENSHCOG00000012617	-	85	53.927
ENSHCOG00000001292	-	70	37.824	ENSHCOG00000015639	znf319b	98	37.126
ENSHCOG00000001292	-	89	53.333	ENSHCOG00000001448	-	68	53.333
ENSHCOG00000001292	-	61	47.445	ENSHCOG00000007464	-	50	47.445
ENSHCOG00000001292	-	70	56.021	ENSHCOG00000001308	-	58	55.556
ENSHCOG00000001292	-	67	58.763	ENSHCOG00000001300	-	91	58.763
ENSHCOG00000001292	-	68	40.000	ENSHCOG00000004879	znf341	56	40.000
ENSHCOG00000001292	-	90	54.011	ENSHCOG00000020940	-	63	53.927
ENSHCOG00000001292	-	59	43.697	ENSHCOG00000010212	-	57	43.312
ENSHCOG00000001292	-	72	54.774	ENSHCOG00000021028	-	90	54.774
ENSHCOG00000001292	-	70	55.357	ENSHCOG00000001238	-	97	54.651
ENSHCOG00000001292	-	69	52.174	ENSHCOG00000014891	-	57	51.020
ENSHCOG00000001292	-	87	49.138	ENSHCOG00000014994	-	83	41.104
ENSHCOG00000001292	-	88	44.147	ENSHCOG00000014781	-	94	44.147
ENSHCOG00000001292	-	63	53.714	ENSHCOG00000014786	-	96	53.714
ENSHCOG00000001292	-	66	46.067	ENSHCOG00000003041	-	86	46.602
ENSHCOG00000001292	-	96	51.064	ENSHCOG00000019458	-	97	51.064
ENSHCOG00000001292	-	91	47.126	ENSHCOG00000007351	-	83	49.215
ENSHCOG00000001292	-	65	40.351	ENSHCOG00000018972	znf710b	51	40.351
ENSHCOG00000001292	-	90	40.199	ENSHCOG00000018977	-	67	44.156
ENSHCOG00000001292	-	87	51.049	ENSHCOG00000009009	-	58	57.639
ENSHCOG00000001292	-	66	35.749	ENSHCOG00000000800	-	81	35.749
ENSHCOG00000001292	-	67	55.063	ENSHCOG00000008028	-	85	55.063
ENSHCOG00000001292	-	62	36.735	ENSHCOG00000011612	zfat	51	36.735
ENSHCOG00000001292	-	59	43.421	ENSHCOG00000008116	scrt2	53	43.421
ENSHCOG00000001292	-	65	51.579	ENSHCOG00000015386	-	81	51.579
ENSHCOG00000001292	-	59	41.509	ENSHCOG00000013713	gfi1b	50	41.509
ENSHCOG00000001292	-	95	53.927	ENSHCOG00000007990	-	85	53.886
ENSHCOG00000001292	-	87	53.846	ENSHCOG00000015414	-	86	53.846
ENSHCOG00000001292	-	89	55.882	ENSHCOG00000001245	-	100	55.882
ENSHCOG00000001292	-	96	53.973	ENSHCOG00000001242	-	99	53.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001292	-	86	46.479	ENSACIG00000017013	-	60	46.479	Amphilophus_citrinellus
ENSHCOG00000001292	-	68	47.959	ENSAMXG00000035683	-	93	47.959	Astyanax_mexicanus
ENSHCOG00000001292	-	59	45.596	ENSCPBG00000002063	-	54	45.596	Chrysemys_picta_bellii
ENSHCOG00000001292	-	67	45.161	ENSGAGG00000017640	-	61	45.161	Gopherus_agassizii
ENSHCOG00000001292	-	64	46.193	ENSGAGG00000005331	-	68	46.193	Gopherus_agassizii
ENSHCOG00000001292	-	70	44.444	ENSIPUG00000015601	-	57	44.444	Ictalurus_punctatus
ENSHCOG00000001292	-	91	40.237	ENSLBEG00000011040	-	84	39.595	Labrus_bergylta
ENSHCOG00000001292	-	68	48.193	ENSORLG00020001707	-	76	48.187	Oryzias_latipes_hni
ENSHCOG00000001292	-	71	46.951	ENSPCIG00000019333	-	87	48.387	Phascolarctos_cinereus
ENSHCOG00000001292	-	87	50.704	ENSPFOG00000024567	-	99	51.412	Poecilia_formosa
ENSHCOG00000001292	-	59	52.121	ENSPFOG00000011209	-	57	52.121	Poecilia_formosa
ENSHCOG00000001292	-	69	39.035	ENSPMEG00000016762	-	95	39.035	Poecilia_mexicana
ENSHCOG00000001292	-	69	43.939	ENSPNAG00000009741	-	55	43.939	Pygocentrus_nattereri
ENSHCOG00000001292	-	63	47.590	ENSPNAG00000008491	-	76	47.590	Pygocentrus_nattereri
ENSHCOG00000001292	-	72	47.692	ENSPNAG00000018409	-	79	47.692	Pygocentrus_nattereri