EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001293 (Gene tree)
Gene ID: 109527219
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4486 bases
Position: chrKV880292.1:2311-6796
Accession: 109527219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000469	Methyltransf_8	PF05148.15	2.3e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013724	-	2175	XM_019889011	ENSHCOP00000000469	515 (aa)	XP_019744570	UPI00094E977E

Gene Model

Click here to download ENSHCOG00000001293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001293	rrp8	100	51.504	ENSAPOG00000008509	-	100	52.356	Acanthochromis_polyacanthus
ENSHCOG00000001293	rrp8	100	51.504	ENSAPOG00000010798	-	98	52.356	Acanthochromis_polyacanthus
ENSHCOG00000001293	rrp8	100	51.504	ENSAPOG00000010806	rrp8	98	52.356	Acanthochromis_polyacanthus
ENSHCOG00000001293	rrp8	94	50.487	ENSACIG00000019896	rrp8	99	51.068	Amphilophus_citrinellus
ENSHCOG00000001293	rrp8	100	51.646	ENSAOCG00000008785	rrp8	100	52.787	Amphiprion_ocellaris
ENSHCOG00000001293	rrp8	100	51.394	ENSAPEG00000008416	rrp8	100	52.265	Amphiprion_percula
ENSHCOG00000001293	rrp8	93	52.134	ENSATEG00000014110	rrp8	98	52.985	Anabas_testudineus
ENSHCOG00000001293	rrp8	52	51.673	ENSANAG00000028524	RRP8	76	59.813	Aotus_nancymaae
ENSHCOG00000001293	rrp8	96	51.595	ENSACLG00000002746	rrp8	100	50.896	Astatotilapia_calliptera
ENSHCOG00000001293	rrp8	100	47.736	ENSAMXG00000005164	rrp8	100	47.736	Astyanax_mexicanus
ENSHCOG00000001293	rrp8	59	48.387	ENSCAFG00020009685	RRP8	53	55.691	Canis_lupus_dingo
ENSHCOG00000001293	rrp8	52	51.301	ENSCCAG00000035197	RRP8	77	58.333	Cebus_capucinus
ENSHCOG00000001293	rrp8	72	42.932	ENSCSAVG00000006435	-	89	42.408	Ciona_savignyi
ENSHCOG00000001293	rrp8	70	55.128	ENSCSEG00000007330	rrp8	100	55.128	Cynoglossus_semilaevis
ENSHCOG00000001293	rrp8	100	48.870	ENSCVAG00000012032	rrp8	100	49.057	Cyprinodon_variegatus
ENSHCOG00000001293	rrp8	100	46.655	ENSDARG00000071652	rrp8	100	46.847	Danio_rerio
ENSHCOG00000001293	rrp8	55	51.408	ENSDORG00000000103	Rrp8	55	54.800	Dipodomys_ordii
ENSHCOG00000001293	rrp8	75	61.594	ENSELUG00000008665	rrp8	78	71.300	Esox_lucius
ENSHCOG00000001293	rrp8	76	52.840	ENSGMOG00000007188	rrp8	100	54.115	Gadus_morhua
ENSHCOG00000001293	rrp8	86	48.460	ENSGAFG00000012331	rrp8	99	47.023	Gambusia_affinis
ENSHCOG00000001293	rrp8	76	55.556	ENSGACG00000011343	rrp8	99	54.637	Gasterosteus_aculeatus
ENSHCOG00000001293	rrp8	96	51.776	ENSHBUG00000017131	rrp8	100	51.075	Haplochromis_burtoni
ENSHCOG00000001293	rrp8	100	46.140	ENSIPUG00000017733	rrp8	100	46.310	Ictalurus_punctatus
ENSHCOG00000001293	rrp8	100	51.228	ENSKMAG00000009229	rrp8	100	52.797	Kryptolebias_marmoratus
ENSHCOG00000001293	rrp8	52	69.776	ENSLBEG00000019937	rrp8	100	54.660	Labrus_bergylta
ENSHCOG00000001293	rrp8	60	53.355	ENSLACG00000001252	-	99	49.616	Latimeria_chalumnae
ENSHCOG00000001293	rrp8	100	47.243	ENSLOCG00000009591	rrp8	100	46.533	Lepisosteus_oculatus
ENSHCOG00000001293	rrp8	100	52.840	ENSMAMG00000009679	rrp8	100	53.195	Mastacembelus_armatus
ENSHCOG00000001293	rrp8	96	51.595	ENSMZEG00005008926	rrp8	100	50.896	Maylandia_zebra
ENSHCOG00000001293	rrp8	94	51.737	ENSMMOG00000015709	rrp8	99	51.064	Mola_mola
ENSHCOG00000001293	rrp8	100	49.231	ENSMALG00000015984	rrp8	100	49.573	Monopterus_albus
ENSHCOG00000001293	rrp8	100	37.187	MGP_PahariEiJ_G0013451	Rrp8	50	57.018	Mus_pahari
ENSHCOG00000001293	rrp8	100	38.815	ENSMPUG00000005510	RRP8	52	55.882	Mustela_putorius_furo
ENSHCOG00000001293	rrp8	72	54.680	ENSNBRG00000023416	rrp8	77	74.528	Neolamprologus_brichardi
ENSHCOG00000001293	rrp8	72	44.952	ENSONIG00000016861	rrp8	96	45.146	Oreochromis_niloticus
ENSHCOG00000001293	rrp8	100	50.178	ENSORLG00000004175	rrp8	99	50.000	Oryzias_latipes
ENSHCOG00000001293	rrp8	100	50.980	ENSORLG00020011413	rrp8	99	50.802	Oryzias_latipes_hni
ENSHCOG00000001293	rrp8	100	50.622	ENSORLG00015015410	rrp8	99	50.444	Oryzias_latipes_hsok
ENSHCOG00000001293	rrp8	100	50.436	ENSOMEG00000003161	rrp8	100	50.780	Oryzias_melastigma
ENSHCOG00000001293	rrp8	100	45.455	ENSPKIG00000024217	rrp8	100	45.122	Paramormyrops_kingsleyae
ENSHCOG00000001293	rrp8	100	52.143	ENSPFOG00000007308	rrp8	100	51.167	Poecilia_formosa
ENSHCOG00000001293	rrp8	100	52.338	ENSPLAG00000011349	rrp8	100	50.887	Poecilia_latipinna
ENSHCOG00000001293	rrp8	100	52.057	ENSPMEG00000009888	rrp8	100	51.971	Poecilia_mexicana
ENSHCOG00000001293	rrp8	86	49.184	ENSPREG00000008450	rrp8	99	48.875	Poecilia_reticulata
ENSHCOG00000001293	rrp8	96	51.796	ENSPNYG00000002878	rrp8	100	51.083	Pundamilia_nyererei
ENSHCOG00000001293	rrp8	100	44.604	ENSPNAG00000024779	rrp8	100	45.863	Pygocentrus_nattereri
ENSHCOG00000001293	rrp8	60	47.097	ENSRNOG00000018766	Rrp8	97	58.852	Rattus_norvegicus
ENSHCOG00000001293	rrp8	100	45.270	ENSSFOG00015003917	rrp8	99	46.062	Scleropages_formosus
ENSHCOG00000001293	rrp8	100	54.049	ENSSMAG00000004859	rrp8	100	53.968	Scophthalmus_maximus
ENSHCOG00000001293	rrp8	100	52.431	ENSSDUG00000010477	rrp8	100	52.604	Seriola_dumerili
ENSHCOG00000001293	rrp8	100	53.509	ENSSLDG00000000521	rrp8	100	53.860	Seriola_lalandi_dorsalis
ENSHCOG00000001293	rrp8	61	60.058	ENSSPAG00000006664	rrp8	79	80.189	Stegastes_partitus
ENSHCOG00000001293	rrp8	100	52.941	ENSTRUG00000021812	rrp8	100	52.297	Takifugu_rubripes
ENSHCOG00000001293	rrp8	50	52.918	ENSTBEG00000000237	RRP8	50	59.330	Tupaia_belangeri
ENSHCOG00000001293	rrp8	59	48.553	ENSUAMG00000025756	RRP8	76	59.813	Ursus_americanus
ENSHCOG00000001293	rrp8	60	48.397	ENSUMAG00000000528	RRP8	65	48.397	Ursus_maritimus
ENSHCOG00000001293	rrp8	70	53.885	ENSXCOG00000006156	rrp8	100	54.177	Xiphophorus_couchianus
ENSHCOG00000001293	rrp8	100	49.291	ENSXMAG00000005011	rrp8	100	50.624	Xiphophorus_maculatus