EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000001313 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2053 bases
Position: chrKV879870.1:1077341-1079393
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017479	zf-C2H2	PF00096.26	8.4e-24	1	3
ENSHCOP00000017479	zf-C2H2	PF00096.26	8.4e-24	2	3
ENSHCOP00000017479	zf-C2H2	PF00096.26	8.4e-24	3	3
ENSHCOP00000017479	zf-met	PF12874.7	8.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013697	-	1050	-	ENSHCOP00000017479	349 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000001313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000001313	-	51	50.000	ENSHCOG00000019454	-	50	50.000
ENSHCOG00000001313	-	52	38.889	ENSHCOG00000020940	-	62	41.406
ENSHCOG00000001313	-	50	41.481	ENSHCOG00000001308	-	65	41.481
ENSHCOG00000001313	-	64	36.559	ENSHCOG00000019481	-	79	42.520
ENSHCOG00000001313	-	65	40.157	ENSHCOG00000021028	-	97	40.157
ENSHCOG00000001313	-	75	41.237	ENSHCOG00000008181	-	74	37.313
ENSHCOG00000001313	-	70	36.232	ENSHCOG00000006286	ZNF319	70	36.232
ENSHCOG00000001313	-	54	41.935	ENSHCOG00000015476	-	91	41.406
ENSHCOG00000001313	-	50	39.535	ENSHCOG00000014850	-	71	39.535
ENSHCOG00000001313	-	50	40.625	ENSHCOG00000014855	-	57	40.625
ENSHCOG00000001313	-	59	44.444	ENSHCOG00000015105	-	92	44.444
ENSHCOG00000001313	-	67	41.406	ENSHCOG00000019001	-	69	41.406
ENSHCOG00000001313	-	50	31.373	ENSHCOG00000016179	-	54	31.373
ENSHCOG00000001313	-	52	40.588	ENSHCOG00000019438	-	89	40.588
ENSHCOG00000001313	-	61	40.984	ENSHCOG00000021073	-	82	40.984
ENSHCOG00000001313	-	72	36.441	ENSHCOG00000017736	znf652	52	36.441
ENSHCOG00000001313	-	74	38.690	ENSHCOG00000012617	-	96	38.690
ENSHCOG00000001313	-	61	31.387	ENSHCOG00000016704	scrt1b	64	31.387
ENSHCOG00000001313	-	73	42.012	ENSHCOG00000015425	-	75	42.012
ENSHCOG00000001313	-	50	40.458	ENSHCOG00000000947	-	68	40.458
ENSHCOG00000001313	-	52	44.444	ENSHCOG00000008550	-	55	44.444
ENSHCOG00000001313	-	55	37.719	ENSHCOG00000020846	-	71	37.719
ENSHCOG00000001313	-	76	44.444	ENSHCOG00000019465	-	71	44.444
ENSHCOG00000001313	-	65	38.889	ENSHCOG00000001318	-	96	35.714
ENSHCOG00000001313	-	52	36.313	ENSHCOG00000001256	-	71	36.313
ENSHCOG00000001313	-	57	40.426	ENSHCOG00000001252	-	95	40.426
ENSHCOG00000001313	-	60	35.514	ENSHCOG00000000511	-	82	33.333
ENSHCOG00000001313	-	50	45.000	ENSHCOG00000019512	-	92	42.361
ENSHCOG00000001313	-	74	37.975	ENSHCOG00000019497	-	77	38.650
ENSHCOG00000001313	-	51	39.216	ENSHCOG00000015005	-	51	39.216
ENSHCOG00000001313	-	57	42.202	ENSHCOG00000015000	-	85	38.889
ENSHCOG00000001313	-	50	40.230	ENSHCOG00000007358	-	65	40.230
ENSHCOG00000001313	-	51	43.000	ENSHCOG00000007351	-	75	43.000
ENSHCOG00000001313	-	57	37.500	ENSHCOG00000012131	prdm5	79	37.500
ENSHCOG00000001313	-	52	40.845	ENSHCOG00000020984	-	74	40.845
ENSHCOG00000001313	-	56	34.951	ENSHCOG00000001345	-	84	34.951
ENSHCOG00000001313	-	50	37.766	ENSHCOG00000020879	-	64	37.766
ENSHCOG00000001313	-	65	37.079	ENSHCOG00000015231	-	65	40.559
ENSHCOG00000001313	-	79	36.471	ENSHCOG00000015484	-	86	36.471
ENSHCOG00000001313	-	77	40.123	ENSHCOG00000000517	-	87	40.123
ENSHCOG00000001313	-	52	43.609	ENSHCOG00000001793	-	99	43.609
ENSHCOG00000001313	-	51	39.416	ENSHCOG00000009009	-	55	39.416
ENSHCOG00000001313	-	57	30.667	ENSHCOG00000014891	-	51	30.667
ENSHCOG00000001313	-	57	38.150	ENSHCOG00000008028	-	84	41.463
ENSHCOG00000001313	-	56	38.235	ENSHCOG00000014713	-	99	37.500
ENSHCOG00000001313	-	64	39.744	ENSHCOG00000020856	-	79	39.744
ENSHCOG00000001313	-	84	37.273	ENSHCOG00000008115	ZBTB14	57	37.273
ENSHCOG00000001313	-	50	37.857	ENSHCOG00000008205	-	70	41.667
ENSHCOG00000001313	-	57	41.085	ENSHCOG00000015010	-	52	41.085
ENSHCOG00000001313	-	50	41.727	ENSHCOG00000013713	gfi1b	50	41.727
ENSHCOG00000001313	-	53	39.216	ENSHCOG00000014874	-	64	32.973
ENSHCOG00000001313	-	85	39.080	ENSHCOG00000020972	-	95	39.855
ENSHCOG00000001313	-	54	35.329	ENSHCOG00000020976	-	64	35.329
ENSHCOG00000001313	-	52	40.972	ENSHCOG00000019555	GFI1	53	40.972
ENSHCOG00000001313	-	55	42.157	ENSHCOG00000014881	-	71	42.157
ENSHCOG00000001313	-	70	37.349	ENSHCOG00000014887	-	65	37.349
ENSHCOG00000001313	-	70	45.038	ENSHCOG00000007664	-	97	46.535
ENSHCOG00000001313	-	50	42.336	ENSHCOG00000012662	-	84	42.336
ENSHCOG00000001313	-	58	42.647	ENSHCOG00000015441	-	78	38.503
ENSHCOG00000001313	-	50	41.481	ENSHCOG00000011411	-	87	41.121
ENSHCOG00000001313	-	55	36.527	ENSHCOG00000000800	-	78	36.527
ENSHCOG00000001313	-	59	38.144	ENSHCOG00000018972	znf710b	53	38.144
ENSHCOG00000001313	-	58	45.736	ENSHCOG00000001272	-	97	38.547
ENSHCOG00000001313	-	63	43.609	ENSHCOG00000003041	-	90	43.564
ENSHCOG00000001313	-	71	38.150	ENSHCOG00000001942	-	97	38.060
ENSHCOG00000001313	-	77	34.058	ENSHCOG00000000627	-	73	31.959
ENSHCOG00000001313	-	58	46.154	ENSHCOG00000008168	-	97	44.444
ENSHCOG00000001313	-	56	48.148	ENSHCOG00000017456	-	84	48.148
ENSHCOG00000001313	-	50	39.583	ENSHCOG00000014786	-	85	39.583
ENSHCOG00000001313	-	50	50.000	ENSHCOG00000001638	-	91	50.000
ENSHCOG00000001313	-	50	40.909	ENSHCOG00000001631	-	54	39.362
ENSHCOG00000001313	-	53	43.885	ENSHCOG00000019541	-	58	43.885
ENSHCOG00000001313	-	61	42.636	ENSHCOG00000015237	-	64	42.636
ENSHCOG00000001313	-	52	44.444	ENSHCOG00000010282	znf236	52	44.444
ENSHCOG00000001313	-	59	41.732	ENSHCOG00000001883	-	84	41.732
ENSHCOG00000001313	-	60	44.706	ENSHCOG00000015459	-	50	44.706
ENSHCOG00000001313	-	58	36.667	ENSHCOG00000007681	-	94	36.667
ENSHCOG00000001313	-	51	38.728	ENSHCOG00000015241	-	65	38.728
ENSHCOG00000001313	-	56	37.278	ENSHCOG00000015246	-	64	40.458
ENSHCOG00000001313	-	57	41.176	ENSHCOG00000019385	-	69	39.286
ENSHCOG00000001313	-	55	43.421	ENSHCOG00000019389	-	62	43.421
ENSHCOG00000001313	-	50	40.476	ENSHCOG00000020909	-	78	40.476
ENSHCOG00000001313	-	51	39.130	ENSHCOG00000000138	-	62	39.130
ENSHCOG00000001313	-	58	41.228	ENSHCOG00000013455	-	90	41.228
ENSHCOG00000001313	-	77	37.629	ENSHCOG00000011433	-	91	37.629
ENSHCOG00000001313	-	83	42.636	ENSHCOG00000011432	-	91	42.636
ENSHCOG00000001313	-	86	45.631	ENSHCOG00000003085	-	87	35.955
ENSHCOG00000001313	-	89	36.434	ENSHCOG00000001338	-	99	36.310
ENSHCOG00000001313	-	77	41.129	ENSHCOG00000014797	-	79	36.486
ENSHCOG00000001313	-	76	37.795	ENSHCOG00000014796	-	83	37.795
ENSHCOG00000001313	-	50	38.764	ENSHCOG00000021033	-	71	40.000
ENSHCOG00000001313	-	53	31.638	ENSHCOG00000001875	zbtb41	50	31.351
ENSHCOG00000001313	-	63	42.202	ENSHCOG00000015386	-	83	42.202
ENSHCOG00000001313	-	50	34.545	ENSHCOG00000010332	-	57	34.545
ENSHCOG00000001313	-	54	41.549	ENSHCOG00000001870	-	60	41.549
ENSHCOG00000001313	-	52	44.444	ENSHCOG00000001873	-	55	44.444
ENSHCOG00000001313	-	58	41.732	ENSHCOG00000015463	-	59	42.105
ENSHCOG00000001313	-	58	46.154	ENSHCOG00000007485	-	90	46.154
ENSHCOG00000001313	-	52	37.681	ENSHCOG00000015639	znf319b	77	37.069
ENSHCOG00000001313	-	56	40.491	ENSHCOG00000001448	-	61	40.491
ENSHCOG00000001313	-	52	46.774	ENSHCOG00000015355	-	85	49.020
ENSHCOG00000001313	-	81	39.024	ENSHCOG00000008234	-	64	39.024
ENSHCOG00000001313	-	60	36.788	ENSHCOG00000018201	-	87	36.979
ENSHCOG00000001313	-	51	42.308	ENSHCOG00000014777	-	68	42.308
ENSHCOG00000001313	-	51	40.476	ENSHCOG00000008601	-	77	40.476
ENSHCOG00000001313	-	57	34.706	ENSHCOG00000001238	-	98	34.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001313	-	50	41.772	ENSAPEG00000019755	-	84	41.772	Amphiprion_percula
ENSHCOG00000001313	-	50	37.500	ENSAPEG00000007889	-	71	37.500	Amphiprion_percula
ENSHCOG00000001313	-	52	34.409	ENSCING00000000529	zf(btb/c2h2)	54	34.409	Ciona_intestinalis
ENSHCOG00000001313	-	51	35.374	ENSCING00000004861	zf(c2h2)-12	68	33.918	Ciona_intestinalis
ENSHCOG00000001313	-	60	32.432	ENSCSAVG00000005896	-	68	33.333	Ciona_savignyi
ENSHCOG00000001313	-	62	32.061	ENSCSAVG00000006729	-	75	32.824	Ciona_savignyi
ENSHCOG00000001313	-	72	38.583	ENSCSAVG00000009574	-	99	38.679	Ciona_savignyi
ENSHCOG00000001313	-	58	32.258	ENSCSEG00000005491	-	64	32.258	Cynoglossus_semilaevis
ENSHCOG00000001313	-	64	50.980	ENSCVAG00000002295	-	81	50.980	Cyprinodon_variegatus
ENSHCOG00000001313	-	57	36.634	ENSCVAG00000016098	-	59	36.634	Cyprinodon_variegatus
ENSHCOG00000001313	-	56	34.074	FBgn0028895	CG17328	51	34.074	Drosophila_melanogaster
ENSHCOG00000001313	-	62	40.000	FBgn0033934	CG17385	63	40.000	Drosophila_melanogaster
ENSHCOG00000001313	-	83	36.788	ENSEBUG00000008392	-	81	36.788	Eptatretus_burgeri
ENSHCOG00000001313	-	60	41.892	ENSEBUG00000015522	-	63	41.892	Eptatretus_burgeri
ENSHCOG00000001313	-	58	35.329	ENSEBUG00000016914	-	51	35.329	Eptatretus_burgeri
ENSHCOG00000001313	-	60	41.053	ENSEBUG00000000735	-	99	41.053	Eptatretus_burgeri
ENSHCOG00000001313	-	60	37.766	ENSEBUG00000004841	-	80	37.766	Eptatretus_burgeri
ENSHCOG00000001313	-	57	35.417	ENSELUG00000020794	-	51	35.417	Esox_lucius
ENSHCOG00000001313	-	54	37.059	ENSFHEG00000020889	-	76	37.059	Fundulus_heteroclitus
ENSHCOG00000001313	-	75	39.130	ENSFHEG00000013644	-	80	39.130	Fundulus_heteroclitus
ENSHCOG00000001313	-	70	34.286	ENSFHEG00000012990	-	95	34.286	Fundulus_heteroclitus
ENSHCOG00000001313	-	59	34.302	ENSFHEG00000003596	-	64	34.302	Fundulus_heteroclitus
ENSHCOG00000001313	-	51	70.430	ENSGACG00000018415	-	99	70.430	Gasterosteus_aculeatus
ENSHCOG00000001313	-	59	35.119	ENSKMAG00000012909	-	78	35.119	Kryptolebias_marmoratus
ENSHCOG00000001313	-	90	39.759	ENSONIG00000016416	-	96	39.759	Oreochromis_niloticus
ENSHCOG00000001313	-	50	42.718	ENSONIG00000007812	-	99	40.237	Oreochromis_niloticus
ENSHCOG00000001313	-	60	32.639	ENSONIG00000009894	-	98	32.639	Oreochromis_niloticus
ENSHCOG00000001313	-	56	34.437	ENSONIG00000003224	-	94	34.437	Oreochromis_niloticus
ENSHCOG00000001313	-	51	73.438	ENSONIG00000003471	-	99	73.438	Oreochromis_niloticus
ENSHCOG00000001313	-	58	36.000	ENSORLG00015018254	-	94	37.059	Oryzias_latipes_hsok
ENSHCOG00000001313	-	58	46.154	ENSPMGG00000010563	-	72	46.154	Periophthalmus_magnuspinnatus
ENSHCOG00000001313	-	61	36.429	ENSPMGG00000022524	-	93	40.845	Periophthalmus_magnuspinnatus
ENSHCOG00000001313	-	60	34.404	ENSPMGG00000000218	-	60	34.302	Periophthalmus_magnuspinnatus
ENSHCOG00000001313	-	61	39.796	ENSPMGG00000000458	-	92	43.000	Periophthalmus_magnuspinnatus
ENSHCOG00000001313	-	60	34.574	ENSPMGG00000000243	-	78	42.742	Periophthalmus_magnuspinnatus
ENSHCOG00000001313	-	64	37.662	ENSPMGG00000010664	-	94	37.662	Periophthalmus_magnuspinnatus
ENSHCOG00000001313	-	54	38.372	ENSPMAG00000007983	-	97	38.372	Petromyzon_marinus
ENSHCOG00000001313	-	55	64.078	ENSPFOG00000020691	-	87	64.251	Poecilia_formosa
ENSHCOG00000001313	-	57	40.769	ENSPFOG00000002879	-	99	40.769	Poecilia_formosa
ENSHCOG00000001313	-	71	37.594	ENSPLAG00000006174	-	71	37.594	Poecilia_latipinna
ENSHCOG00000001313	-	57	34.884	ENSPMEG00000019229	-	63	34.884	Poecilia_mexicana
ENSHCOG00000001313	-	63	42.636	ENSPMEG00000022676	-	99	42.636	Poecilia_mexicana
ENSHCOG00000001313	-	82	38.346	ENSPMEG00000007503	-	100	38.346	Poecilia_mexicana
ENSHCOG00000001313	-	57	34.104	ENSPREG00000007146	-	60	34.104	Poecilia_reticulata
ENSHCOG00000001313	-	62	35.802	ENSPREG00000016204	-	64	35.802	Poecilia_reticulata
ENSHCOG00000001313	-	77	36.691	ENSPREG00000015352	-	91	36.691	Poecilia_reticulata
ENSHCOG00000001313	-	60	43.000	ENSPNAG00000025211	-	50	43.000	Pygocentrus_nattereri
ENSHCOG00000001313	-	74	44.660	ENSSDUG00000000946	-	89	43.411	Seriola_dumerili
ENSHCOG00000001313	-	58	38.889	ENSTNIG00000008154	-	99	38.889	Tetraodon_nigroviridis
ENSHCOG00000001313	-	58	38.889	ENSXCOG00000005697	-	95	38.889	Xiphophorus_couchianus