EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001368 (Gene tree)
Gene ID: 109518463
Gene Symbol: tsen34
Alias: si:ch211-203b8.3
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8035 bases
Position: chrKV880049.1:2662476-2670510
Accession: 109518463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017518	tRNA_int_endo	PF01974.17	2.8e-18	1	1
ENSHCOP00000000537	tRNA_int_endo	PF01974.17	3.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013612	-	2146	XM_019874291	ENSHCOP00000017518	278 (aa)	XP_019729850	UPI00094F2C55
ENSHCOT00000013617	-	882	-	ENSHCOP00000000537	293 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000001368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001368	tsen34	92	39.869	ENSG00000170892	TSEN34	96	39.869	Homo_sapiens
ENSHCOG00000001368	tsen34	97	54.577	ENSAPOG00000008579	-	99	58.909	Acanthochromis_polyacanthus
ENSHCOG00000001368	tsen34	98	59.044	ENSAPOG00000001248	tsen34	99	59.044	Acanthochromis_polyacanthus
ENSHCOG00000001368	tsen34	91	58.456	ENSAPOG00000012557	-	92	58.456	Acanthochromis_polyacanthus
ENSHCOG00000001368	tsen34	86	38.811	ENSAMEG00000004585	TSEN34	100	38.811	Ailuropoda_melanoleuca
ENSHCOG00000001368	tsen34	99	57.692	ENSACIG00000007110	tsen34	95	55.479	Amphilophus_citrinellus
ENSHCOG00000001368	tsen34	95	61.372	ENSAOCG00000006905	tsen34	94	61.372	Amphiprion_ocellaris
ENSHCOG00000001368	tsen34	95	61.372	ENSAPEG00000019171	tsen34	94	61.733	Amphiprion_percula
ENSHCOG00000001368	tsen34	100	54.167	ENSATEG00000019800	tsen34	100	55.017	Anabas_testudineus
ENSHCOG00000001368	tsen34	95	37.500	ENSACAG00000016189	TSEN34	99	38.462	Anolis_carolinensis
ENSHCOG00000001368	tsen34	92	38.614	ENSANAG00000026113	TSEN34	96	39.867	Aotus_nancymaae
ENSHCOG00000001368	tsen34	99	56.028	ENSACLG00000009661	tsen34	96	55.986	Astatotilapia_calliptera
ENSHCOG00000001368	tsen34	96	49.819	ENSAMXG00000017568	tsen34	92	48.630	Astyanax_mexicanus
ENSHCOG00000001368	tsen34	92	37.748	ENSBTAG00000006486	TSEN34	96	37.748	Bos_taurus
ENSHCOG00000001368	tsen34	92	41.463	ENSCJAG00000001128	TSEN34	96	41.463	Callithrix_jacchus
ENSHCOG00000001368	tsen34	92	37.294	ENSCAFG00000002675	TSEN34	96	39.934	Canis_familiaris
ENSHCOG00000001368	tsen34	92	37.542	ENSCAFG00020018350	TSEN34	96	37.874	Canis_lupus_dingo
ENSHCOG00000001368	tsen34	92	38.514	ENSCHIG00000020705	TSEN34	96	38.851	Capra_hircus
ENSHCOG00000001368	tsen34	90	37.966	ENSTSYG00000028200	TSEN34	95	38.095	Carlito_syrichta
ENSHCOG00000001368	tsen34	92	39.863	ENSCPOG00000012672	TSEN34	96	41.581	Cavia_porcellus
ENSHCOG00000001368	tsen34	92	40.830	ENSCCAG00000036023	TSEN34	96	41.522	Cebus_capucinus
ENSHCOG00000001368	tsen34	87	37.153	ENSCATG00000033390	TSEN34	91	37.153	Cercocebus_atys
ENSHCOG00000001368	tsen34	92	40.816	ENSCLAG00000000618	TSEN34	96	40.816	Chinchilla_lanigera
ENSHCOG00000001368	tsen34	92	39.535	ENSCSAG00000001891	TSEN34	96	39.535	Chlorocebus_sabaeus
ENSHCOG00000001368	tsen34	92	39.203	ENSCANG00000040984	TSEN34	96	39.203	Colobus_angolensis_palliatus
ENSHCOG00000001368	tsen34	92	38.889	ENSCGRG00001006296	Tsen34	96	39.542	Cricetulus_griseus_chok1gshd
ENSHCOG00000001368	tsen34	99	54.737	ENSCSEG00000006278	tsen34	93	54.737	Cynoglossus_semilaevis
ENSHCOG00000001368	tsen34	96	52.174	ENSDARG00000061370	tsen34	89	51.812	Danio_rerio
ENSHCOG00000001368	tsen34	92	37.874	ENSDNOG00000039332	TSEN34	96	37.542	Dasypus_novemcinctus
ENSHCOG00000001368	tsen34	92	39.189	ENSDORG00000029071	Tsen34	96	39.262	Dipodomys_ordii
ENSHCOG00000001368	tsen34	51	33.803	FBgn0053260	CG33260	50	33.803	Drosophila_melanogaster
ENSHCOG00000001368	tsen34	92	39.203	ENSEASG00005021580	TSEN34	96	39.535	Equus_asinus_asinus
ENSHCOG00000001368	tsen34	92	38.870	ENSECAG00000019651	TSEN34	83	38.870	Equus_caballus
ENSHCOG00000001368	tsen34	95	51.786	ENSELUG00000006262	tsen34	92	51.418	Esox_lucius
ENSHCOG00000001368	tsen34	92	39.203	ENSFCAG00000014045	TSEN34	96	39.203	Felis_catus
ENSHCOG00000001368	tsen34	100	52.595	ENSFHEG00000008791	tsen34	99	54.027	Fundulus_heteroclitus
ENSHCOG00000001368	tsen34	67	54.974	ENSGMOG00000001961	tsen34	94	56.906	Gadus_morhua
ENSHCOG00000001368	tsen34	100	58.681	ENSGAFG00000016880	tsen34	99	58.681	Gambusia_affinis
ENSHCOG00000001368	tsen34	96	52.685	ENSGACG00000004800	tsen34	100	52.685	Gasterosteus_aculeatus
ENSHCOG00000001368	tsen34	95	41.812	ENSGAGG00000008982	TSEN34	82	39.688	Gopherus_agassizii
ENSHCOG00000001368	tsen34	92	40.199	ENSGGOG00000008197	TSEN34	96	40.199	Gorilla_gorilla
ENSHCOG00000001368	tsen34	99	56.690	ENSHBUG00000016593	tsen34	86	55.986	Haplochromis_burtoni
ENSHCOG00000001368	tsen34	92	39.597	ENSHGLG00000017619	TSEN34	96	39.394	Heterocephalus_glaber_female
ENSHCOG00000001368	tsen34	99	47.973	ENSIPUG00000008359	tsen34	92	48.311	Ictalurus_punctatus
ENSHCOG00000001368	tsen34	92	40.864	ENSSTOG00000023816	TSEN34	96	40.864	Ictidomys_tridecemlineatus
ENSHCOG00000001368	tsen34	92	38.033	ENSJJAG00000016301	Tsen34	96	38.033	Jaculus_jaculus
ENSHCOG00000001368	tsen34	97	57.609	ENSKMAG00000007181	tsen34	85	58.303	Kryptolebias_marmoratus
ENSHCOG00000001368	tsen34	99	57.951	ENSLBEG00000015001	tsen34	98	57.951	Labrus_bergylta
ENSHCOG00000001368	tsen34	96	50.360	ENSLOCG00000001887	tsen34	99	50.360	Lepisosteus_oculatus
ENSHCOG00000001368	tsen34	92	37.785	ENSLAFG00000015215	TSEN34	96	37.785	Loxodonta_africana
ENSHCOG00000001368	tsen34	92	38.206	ENSMFAG00000044825	TSEN34	96	38.206	Macaca_fascicularis
ENSHCOG00000001368	tsen34	92	38.206	ENSMMUG00000016571	TSEN34	96	38.206	Macaca_mulatta
ENSHCOG00000001368	tsen34	92	38.206	ENSMNEG00000045457	TSEN34	96	38.206	Macaca_nemestrina
ENSHCOG00000001368	tsen34	100	56.140	ENSMAMG00000018407	tsen34	100	56.098	Mastacembelus_armatus
ENSHCOG00000001368	tsen34	99	56.690	ENSMZEG00005002313	tsen34	96	56.690	Maylandia_zebra
ENSHCOG00000001368	tsen34	70	34.426	ENSMAUG00000019716	Tsen34	77	34.426	Mesocricetus_auratus
ENSHCOG00000001368	tsen34	92	38.870	ENSMICG00000002409	TSEN34	96	38.870	Microcebus_murinus
ENSHCOG00000001368	tsen34	92	38.511	ENSMOCG00000022190	Tsen34	96	37.217	Microtus_ochrogaster
ENSHCOG00000001368	tsen34	99	49.518	ENSMMOG00000009551	tsen34	94	57.874	Mola_mola
ENSHCOG00000001368	tsen34	92	38.435	ENSMODG00000003984	-	78	39.032	Monodelphis_domestica
ENSHCOG00000001368	tsen34	99	56.028	ENSMALG00000018918	tsen34	97	56.028	Monopterus_albus
ENSHCOG00000001368	tsen34	92	38.742	MGP_CAROLIEiJ_G0029099	Tsen34	96	38.742	Mus_caroli
ENSHCOG00000001368	tsen34	81	51.128	ENSMUSG00000035585	Tsen34	96	38.614	Mus_musculus
ENSHCOG00000001368	tsen34	92	38.487	MGP_PahariEiJ_G0020968	Tsen34	96	38.487	Mus_pahari
ENSHCOG00000001368	tsen34	92	38.614	MGP_SPRETEiJ_G0030152	Tsen34	96	38.614	Mus_spretus
ENSHCOG00000001368	tsen34	92	38.206	ENSMPUG00000010373	TSEN34	96	38.206	Mustela_putorius_furo
ENSHCOG00000001368	tsen34	92	39.404	ENSMLUG00000016894	TSEN34	96	39.404	Myotis_lucifugus
ENSHCOG00000001368	tsen34	74	33.465	ENSNGAG00000016187	Tsen34	92	33.858	Nannospalax_galili
ENSHCOG00000001368	tsen34	98	50.667	ENSNBRG00000008640	tsen34	97	57.246	Neolamprologus_brichardi
ENSHCOG00000001368	tsen34	92	39.322	ENSNLEG00000006309	TSEN34	96	41.017	Nomascus_leucogenys
ENSHCOG00000001368	tsen34	95	42.857	ENSMEUG00000002978	TSEN34	99	42.857	Notamacropus_eugenii
ENSHCOG00000001368	tsen34	92	38.689	ENSODEG00000000096	TSEN34	96	38.689	Octodon_degus
ENSHCOG00000001368	tsen34	96	56.115	ENSONIG00000017253	tsen34	100	55.396	Oreochromis_niloticus
ENSHCOG00000001368	tsen34	67	38.605	ENSOANG00000014747	-	95	38.140	Ornithorhynchus_anatinus
ENSHCOG00000001368	tsen34	95	58.672	ENSORLG00015012740	tsen34	96	58.303	Oryzias_latipes_hsok
ENSHCOG00000001368	tsen34	95	58.672	ENSOMEG00000016771	tsen34	95	57.993	Oryzias_melastigma
ENSHCOG00000001368	tsen34	92	39.203	ENSOGAG00000006966	TSEN34	96	39.203	Otolemur_garnettii
ENSHCOG00000001368	tsen34	77	33.591	ENSOARG00000002763	TSEN34	86	33.591	Ovis_aries
ENSHCOG00000001368	tsen34	92	40.864	ENSPPAG00000036935	TSEN34	96	40.864	Pan_paniscus
ENSHCOG00000001368	tsen34	92	39.203	ENSPPRG00000011779	TSEN34	96	39.203	Panthera_pardus
ENSHCOG00000001368	tsen34	92	39.869	ENSPTRG00000011448	TSEN34	96	39.869	Pan_troglodytes
ENSHCOG00000001368	tsen34	92	39.869	ENSPTRG00000044768	-	96	39.869	Pan_troglodytes
ENSHCOG00000001368	tsen34	92	39.203	ENSPANG00000012101	TSEN34	96	39.203	Papio_anubis
ENSHCOG00000001368	tsen34	94	50.923	ENSPKIG00000014674	tsen34	96	49.117	Paramormyrops_kingsleyae
ENSHCOG00000001368	tsen34	92	38.079	ENSPEMG00000014535	Tsen34	96	39.073	Peromyscus_maniculatus_bairdii
ENSHCOG00000001368	tsen34	100	56.207	ENSPFOG00000008679	tsen34	99	56.897	Poecilia_formosa
ENSHCOG00000001368	tsen34	100	56.552	ENSPLAG00000017309	tsen34	99	57.241	Poecilia_latipinna
ENSHCOG00000001368	tsen34	100	56.207	ENSPMEG00000005235	tsen34	99	56.897	Poecilia_mexicana
ENSHCOG00000001368	tsen34	99	59.574	ENSPREG00000021784	tsen34	96	59.574	Poecilia_reticulata
ENSHCOG00000001368	tsen34	92	39.869	ENSPPYG00000010376	TSEN34	92	39.869	Pongo_abelii
ENSHCOG00000001368	tsen34	92	39.535	ENSPCAG00000012359	TSEN34	96	39.535	Procavia_capensis
ENSHCOG00000001368	tsen34	92	39.867	ENSPCOG00000013843	TSEN34	96	39.867	Propithecus_coquereli
ENSHCOG00000001368	tsen34	92	39.057	ENSPVAG00000015570	TSEN34	96	39.057	Pteropus_vampyrus
ENSHCOG00000001368	tsen34	99	56.690	ENSPNYG00000024090	tsen34	75	56.690	Pundamilia_nyererei
ENSHCOG00000001368	tsen34	96	49.110	ENSPNAG00000028698	tsen34	92	47.987	Pygocentrus_nattereri
ENSHCOG00000001368	tsen34	92	38.614	ENSRNOG00000055179	Tsen34	96	38.614	Rattus_norvegicus
ENSHCOG00000001368	tsen34	92	38.614	ENSRNOG00000059572	Tsen34l1	96	38.614	Rattus_norvegicus
ENSHCOG00000001368	tsen34	92	39.203	ENSRBIG00000034430	TSEN34	96	39.203	Rhinopithecus_bieti
ENSHCOG00000001368	tsen34	92	39.203	ENSRROG00000024217	TSEN34	96	39.203	Rhinopithecus_roxellana
ENSHCOG00000001368	tsen34	87	38.276	ENSSBOG00000016017	TSEN34	93	39.649	Saimiri_boliviensis_boliviensis
ENSHCOG00000001368	tsen34	65	50.777	ENSSFOG00015017579	tsen34	81	50.510	Scleropages_formosus
ENSHCOG00000001368	tsen34	99	53.846	ENSSMAG00000005214	tsen34	99	53.846	Scophthalmus_maximus
ENSHCOG00000001368	tsen34	97	57.746	ENSSDUG00000005391	tsen34	95	57.292	Seriola_dumerili
ENSHCOG00000001368	tsen34	99	57.639	ENSSLDG00000006144	tsen34	96	53.571	Seriola_lalandi_dorsalis
ENSHCOG00000001368	tsen34	87	34.797	ENSSARG00000005857	TSEN34	78	35.135	Sorex_araneus
ENSHCOG00000001368	tsen34	95	38.488	ENSSPUG00000008447	TSEN34	99	38.889	Sphenodon_punctatus
ENSHCOG00000001368	tsen34	99	54.196	ENSSPAG00000010512	tsen34	97	56.993	Stegastes_partitus
ENSHCOG00000001368	tsen34	92	39.073	ENSSSCG00000003268	TSEN34	96	39.803	Sus_scrofa
ENSHCOG00000001368	tsen34	91	54.198	ENSTRUG00000000787	tsen34	89	54.198	Takifugu_rubripes
ENSHCOG00000001368	tsen34	96	53.535	ENSTNIG00000011201	tsen34	100	53.535	Tetraodon_nigroviridis
ENSHCOG00000001368	tsen34	96	53.103	ENSTNIG00000001937	-	100	53.925	Tetraodon_nigroviridis
ENSHCOG00000001368	tsen34	92	38.870	ENSTTRG00000006571	TSEN34	96	38.870	Tursiops_truncatus
ENSHCOG00000001368	tsen34	92	38.206	ENSUAMG00000008701	TSEN34	96	39.203	Ursus_americanus
ENSHCOG00000001368	tsen34	92	37.542	ENSVVUG00000008211	TSEN34	96	37.874	Vulpes_vulpes
ENSHCOG00000001368	tsen34	95	39.365	ENSXETG00000004597	tsen34	99	39.933	Xenopus_tropicalis
ENSHCOG00000001368	tsen34	100	58.333	ENSXMAG00000024266	tsen34	99	58.333	Xiphophorus_maculatus