EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000001401 (Gene tree)
Gene ID
109518495
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
23165 bases
Position
chrKV880049.1:2614496-2637660
Accession
109518495
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000000570tRNA_anti-codonPF01336.251.1e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000013569-2655XM_019874352ENSHCOP00000000570611 (aa)XP_019729911UPI00094E0A82
Gene Model
Click here to download ENSHCOG00000001401's gene model file
Pathways
Pathway IDPathway NameSource
hcq03030DNA replicationKEGG
hcq03420Nucleotide excision repairKEGG
hcq03430Mismatch repairKEGG
hcq03440Homologous recombinationKEGG
hcq03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001401's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000001401rpa19942.414ENSHCOG00000000351RPA19842.020
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000001401rpa19973.203ENSAPOG00000011658rpa19973.203Acanthochromis_polyacanthus
ENSHCOG00000001401rpa19958.487ENSAPOG00000019409RPA19162.132Acanthochromis_polyacanthus
ENSHCOG00000001401rpa19661.745ENSAMEG00000007706RPA19561.720Ailuropoda_melanoleuca
ENSHCOG00000001401rpa19665.816ENSACIG00000007277rpa19965.816Amphilophus_citrinellus
ENSHCOG00000001401rpa19557.288ENSACIG00000012881RPA19957.949Amphilophus_citrinellus
ENSHCOG00000001401rpa19954.121ENSAOCG00000009003RPA19954.277Amphiprion_ocellaris
ENSHCOG00000001401rpa19974.837ENSAOCG00000023376rpa19974.754Amphiprion_ocellaris
ENSHCOG00000001401rpa19974.346ENSAPEG00000008634rpa19974.262Amphiprion_percula
ENSHCOG00000001401rpa19953.566ENSAPEG00000019132RPA19953.191Amphiprion_percula
ENSHCOG00000001401rpa19573.928ENSATEG00000022024rpa110073.504Anabas_testudineus
ENSHCOG00000001401rpa19955.247ENSATEG00000006443RPA19954.671Anabas_testudineus
ENSHCOG00000001401rpa19762.621ENSAPLG00000012442RPA19062.621Anas_platyrhynchos
ENSHCOG00000001401rpa19955.610ENSACAG00000014490RPA19955.772Anolis_carolinensis
ENSHCOG00000001401rpa19662.162ENSANAG00000023456RPA19861.655Aotus_nancymaae
ENSHCOG00000001401rpa19473.391ENSACLG00000006640rpa19973.391Astatotilapia_calliptera
ENSHCOG00000001401rpa19956.113ENSACLG00000005223RPA19956.495Astatotilapia_calliptera
ENSHCOG00000001401rpa19970.443ENSAMXG00000008418rpa19970.772Astyanax_mexicanus
ENSHCOG00000001401rpa19960.848ENSBTAG00000009711RPA19960.258Bos_taurus
ENSHCOG00000001401rpa18530.755WBGene00017546rpa-16532.028Caenorhabditis_elegans
ENSHCOG00000001401rpa19959.675ENSCJAG00000001848RPA19958.966Callithrix_jacchus
ENSHCOG00000001401rpa19960.884ENSCAFG00000019249RPA19960.720Canis_familiaris
ENSHCOG00000001401rpa19960.884ENSCAFG00020009847RPA19960.720Canis_lupus_dingo
ENSHCOG00000001401rpa19961.264ENSCHIG00000026308RPA19960.806Capra_hircus
ENSHCOG00000001401rpa19960.976ENSTSYG00000003482-9960.359Carlito_syrichta
ENSHCOG00000001401rpa19960.556ENSCPOG00000000035RPA19960.390Cavia_porcellus
ENSHCOG00000001401rpa19952.195ENSCCAG00000010981RPA19951.608Cebus_capucinus
ENSHCOG00000001401rpa19958.756ENSCLAG00000015045-9958.442Chinchilla_lanigera
ENSHCOG00000001401rpa19961.827ENSCLAG00000005185-9961.489Chinchilla_lanigera
ENSHCOG00000001401rpa19952.941ENSCSAG00000013833RPA19953.171Chlorocebus_sabaeus
ENSHCOG00000001401rpa19560.237ENSCHOG00000013540-9959.727Choloepus_hoffmanni
ENSHCOG00000001401rpa17167.972ENSCHOG00000009454-9967.972Choloepus_hoffmanni
ENSHCOG00000001401rpa19959.967ENSCPBG00000020377RPA19960.808Chrysemys_picta_bellii
ENSHCOG00000001401rpa19941.667ENSCING00000023482-9941.100Ciona_intestinalis
ENSHCOG00000001401rpa19661.616ENSCANG00000030911RPA19761.616Colobus_angolensis_palliatus
ENSHCOG00000001401rpa19959.936ENSCGRG00001008197Rpa19959.646Cricetulus_griseus_chok1gshd
ENSHCOG00000001401rpa18261.434ENSCGRG00000000582Rpa19363.900Cricetulus_griseus_crigri
ENSHCOG00000001401rpa19953.045ENSCSEG00000012726RPA19952.921Cynoglossus_semilaevis
ENSHCOG00000001401rpa110071.916ENSCSEG00000013066rpa110071.916Cynoglossus_semilaevis
ENSHCOG00000001401rpa110073.864ENSCVAG00000019431rpa110074.026Cyprinodon_variegatus
ENSHCOG00000001401rpa19652.859ENSCVAG00000013446-8063.789Cyprinodon_variegatus
ENSHCOG00000001401rpa19969.394ENSDARG00000003938rpa19969.394Danio_rerio
ENSHCOG00000001401rpa19861.779ENSDNOG00000017218RPA19861.450Dasypus_novemcinctus
ENSHCOG00000001401rpa19960.784ENSDORG00000006199Rpa19960.656Dipodomys_ordii
ENSHCOG00000001401rpa19940.584FBgn0010173RpA-709940.000Drosophila_melanogaster
ENSHCOG00000001401rpa18275.789ENSETEG00000017608RPA18275.789Echinops_telfairi
ENSHCOG00000001401rpa19661.551ENSEASG00005009372RPA19961.207Equus_asinus_asinus
ENSHCOG00000001401rpa19960.813ENSECAG00000023886RPA19960.650Equus_caballus
ENSHCOG00000001401rpa16868.106ENSEEUG00000002186-6868.106Erinaceus_europaeus
ENSHCOG00000001401rpa19971.289ENSELUG00000021071rpa19971.289Esox_lucius
ENSHCOG00000001401rpa18859.150ENSELUG00000006136RPA19958.410Esox_lucius
ENSHCOG00000001401rpa19960.196ENSFCAG00000006306RPA19959.706Felis_catus
ENSHCOG00000001401rpa19959.641ENSFALG00000006575RPA19958.987Ficedula_albicollis
ENSHCOG00000001401rpa19962.418ENSFDAG00000007720RPA19962.075Fukomys_damarensis
ENSHCOG00000001401rpa110074.878ENSFHEG00000003580rpa110074.878Fundulus_heteroclitus
ENSHCOG00000001401rpa19967.980ENSGMOG00000010382rpa19968.144Gadus_morhua
ENSHCOG00000001401rpa19957.938ENSGALG00000003072RPA19957.610Gallus_gallus
ENSHCOG00000001401rpa110073.083ENSGAFG00000012916rpa110073.246Gambusia_affinis
ENSHCOG00000001401rpa19955.589ENSGAFG00000020953RPA18465.831Gambusia_affinis
ENSHCOG00000001401rpa110072.431ENSGACG00000010856rpa110072.104Gasterosteus_aculeatus
ENSHCOG00000001401rpa19959.641ENSGAGG00000013611RPA19959.508Gopherus_agassizii
ENSHCOG00000001401rpa19960.492ENSGGOG00000014186RPA19960.261Gorilla_gorilla
ENSHCOG00000001401rpa19975.490ENSHBUG00000017773rpa19975.490Haplochromis_burtoni
ENSHCOG00000001401rpa19552.048ENSHBUG00000009348RPA19851.877Haplochromis_burtoni
ENSHCOG00000001401rpa19962.013ENSHGLG00000008846RPA19961.750Heterocephalus_glaber_female
ENSHCOG00000001401rpa19957.843ENSHGLG00100000799-9958.023Heterocephalus_glaber_male
ENSHCOG00000001401rpa19952.932ENSHGLG00100002005-9952.520Heterocephalus_glaber_male
ENSHCOG00000001401rpa19962.013ENSHGLG00100017755-9961.750Heterocephalus_glaber_male
ENSHCOG00000001401rpa19970.473ENSIPUG00000004400rpa19969.821Ictalurus_punctatus
ENSHCOG00000001401rpa19161.082ENSSTOG00000022475RPA19560.839Ictidomys_tridecemlineatus
ENSHCOG00000001401rpa19562.795ENSJJAG00000000876Rpa19861.538Jaculus_jaculus
ENSHCOG00000001401rpa19957.236ENSKMAG00000000234RPA19956.863Kryptolebias_marmoratus
ENSHCOG00000001401rpa110073.430ENSKMAG00000005605rpa110073.779Kryptolebias_marmoratus
ENSHCOG00000001401rpa19975.777ENSLBEG00000021604rpa19975.450Labrus_bergylta
ENSHCOG00000001401rpa19957.746ENSLBEG00000002281RPA18361.556Labrus_bergylta
ENSHCOG00000001401rpa18156.513ENSLACG00000007210RPA19259.211Latimeria_chalumnae
ENSHCOG00000001401rpa19969.067ENSLOCG00000006397rpa19968.637Lepisosteus_oculatus
ENSHCOG00000001401rpa19960.577ENSLAFG00000015354RPA19960.256Loxodonta_africana
ENSHCOG00000001401rpa18060.040ENSMFAG00000036138-9860.279Macaca_fascicularis
ENSHCOG00000001401rpa19662.395ENSMMUG00000011604-9762.584Macaca_mulatta
ENSHCOG00000001401rpa19956.311ENSMMUG00000002442-9955.700Macaca_mulatta
ENSHCOG00000001401rpa18861.635ENSMNEG00000029837-9961.635Macaca_nemestrina
ENSHCOG00000001401rpa19561.695ENSMNEG00000031632-9861.889Macaca_nemestrina
ENSHCOG00000001401rpa19659.832ENSMLEG00000038768-9860.033Mandrillus_leucophaeus
ENSHCOG00000001401rpa110075.204ENSMAMG00000017993rpa110075.204Mastacembelus_armatus
ENSHCOG00000001401rpa19953.453ENSMAMG00000020097RPA19362.613Mastacembelus_armatus
ENSHCOG00000001401rpa19975.163ENSMZEG00005007551rpa19975.163Maylandia_zebra
ENSHCOG00000001401rpa19956.113ENSMZEG00005024731RPA19956.495Maylandia_zebra
ENSHCOG00000001401rpa19957.447ENSMGAG00000005315RPA19956.956Meleagris_gallopavo
ENSHCOG00000001401rpa19662.040ENSMAUG00000010474Rpa19861.706Mesocricetus_auratus
ENSHCOG00000001401rpa19960.778ENSMICG00000012867RPA19960.292Microcebus_murinus
ENSHCOG00000001401rpa19958.814ENSMOCG00000013019Rpa19958.497Microtus_ochrogaster
ENSHCOG00000001401rpa110072.757ENSMMOG00000014292rpa110074.705Mola_mola
ENSHCOG00000001401rpa19856.833ENSMMOG00000010868RPA19663.221Mola_mola
ENSHCOG00000001401rpa19960.323ENSMODG00000010549RPA19959.935Monodelphis_domestica
ENSHCOG00000001401rpa110075.041ENSMALG00000011453rpa110074.675Monopterus_albus
ENSHCOG00000001401rpa19962.870ENSMALG00000001208RPA18261.915Monopterus_albus
ENSHCOG00000001401rpa19959.135MGP_CAROLIEiJ_G0016734Rpa19959.314Mus_caroli
ENSHCOG00000001401rpa19958.637ENSMUSG00000000751Rpa19958.481Mus_musculus
ENSHCOG00000001401rpa19960.577MGP_PahariEiJ_G0017871Rpa19960.454Mus_pahari
ENSHCOG00000001401rpa19958.544MGP_SPRETEiJ_G0017577Rpa19958.387Mus_spretus
ENSHCOG00000001401rpa19960.292ENSMPUG00000013119RPA19959.675Mustela_putorius_furo
ENSHCOG00000001401rpa19661.603ENSMLUG00000006113RPA19561.102Myotis_lucifugus
ENSHCOG00000001401rpa19661.628ENSNGAG00000004522Rpa19461.065Nannospalax_galili
ENSHCOG00000001401rpa19854.050ENSNBRG00000009672RPA19753.530Neolamprologus_brichardi
ENSHCOG00000001401rpa19573.666ENSNBRG00000020595rpa19973.150Neolamprologus_brichardi
ENSHCOG00000001401rpa19961.564ENSNLEG00000017149RPA19961.426Nomascus_leucogenys
ENSHCOG00000001401rpa19655.818ENSMEUG00000006714RPA19754.882Notamacropus_eugenii
ENSHCOG00000001401rpa19562.312ENSODEG00000009038RPA19661.307Octodon_degus
ENSHCOG00000001401rpa19975.447ENSONIG00000013135rpa19975.122Oreochromis_niloticus
ENSHCOG00000001401rpa19860.920ENSOANG00000010880RPA19960.231Ornithorhynchus_anatinus
ENSHCOG00000001401rpa19959.815ENSOCUG00000001504RPA19958.942Oryctolagus_cuniculus
ENSHCOG00000001401rpa19972.623ENSORLG00000004856rpa19972.459Oryzias_latipes
ENSHCOG00000001401rpa19953.456ENSORLG00000003368RPA19952.074Oryzias_latipes
ENSHCOG00000001401rpa19952.640ENSORLG00020015284RPA18462.955Oryzias_latipes_hni
ENSHCOG00000001401rpa19972.787ENSORLG00020008980rpa19972.623Oryzias_latipes_hni
ENSHCOG00000001401rpa19972.787ENSORLG00015013982rpa19972.623Oryzias_latipes_hsok
ENSHCOG00000001401rpa16761.594ENSORLG00015005867-9561.594Oryzias_latipes_hsok
ENSHCOG00000001401rpa19953.991ENSORLG00015020383RPA19953.365Oryzias_latipes_hsok
ENSHCOG00000001401rpa19970.656ENSOMEG00000004704rpa19970.164Oryzias_melastigma
ENSHCOG00000001401rpa19455.749ENSOMEG00000011040RPA19955.556Oryzias_melastigma
ENSHCOG00000001401rpa17571.271ENSOGAG00000029379-9871.271Otolemur_garnettii
ENSHCOG00000001401rpa19960.737ENSOGAG00000005581-9960.356Otolemur_garnettii
ENSHCOG00000001401rpa19961.039ENSOARG00000014479RPA19960.582Ovis_aries
ENSHCOG00000001401rpa19961.564ENSPPAG00000039680RPA19961.750Pan_paniscus
ENSHCOG00000001401rpa19960.359ENSPPRG00000011807RPA19959.380Panthera_pardus
ENSHCOG00000001401rpa19960.359ENSPTIG00000007898RPA19959.380Panthera_tigris_altaica
ENSHCOG00000001401rpa19961.726ENSPTRG00000008539RPA19961.912Pan_troglodytes
ENSHCOG00000001401rpa19961.338ENSPANG00000024592RPA19961.526Papio_anubis
ENSHCOG00000001401rpa19966.069ENSPKIG00000008053rpa19865.267Paramormyrops_kingsleyae
ENSHCOG00000001401rpa19661.149ENSPSIG00000015617RPA19860.406Pelodiscus_sinensis
ENSHCOG00000001401rpa19954.045ENSPMGG00000000543RPA19957.118Periophthalmus_magnuspinnatus
ENSHCOG00000001401rpa19972.295ENSPMGG00000011589rpa19972.295Periophthalmus_magnuspinnatus
ENSHCOG00000001401rpa19960.417ENSPEMG00000021061Rpa19959.967Peromyscus_maniculatus_bairdii
ENSHCOG00000001401rpa19960.492ENSPCIG00000019049RPA19960.488Phascolarctos_cinereus
ENSHCOG00000001401rpa110074.551ENSPFOG00000003987rpa110074.715Poecilia_formosa
ENSHCOG00000001401rpa110074.388ENSPLAG00000004984rpa110074.551Poecilia_latipinna
ENSHCOG00000001401rpa19455.751ENSPLAG00000008844-9655.128Poecilia_latipinna
ENSHCOG00000001401rpa19456.006ENSPMEG00000003627-9654.808Poecilia_mexicana
ENSHCOG00000001401rpa110074.551ENSPMEG00000020602rpa110074.715Poecilia_mexicana
ENSHCOG00000001401rpa19367.368ENSPREG00000010174rpa19567.250Poecilia_reticulata
ENSHCOG00000001401rpa19955.224ENSPREG00000010119RPA18266.970Poecilia_reticulata
ENSHCOG00000001401rpa19961.712ENSPCOG00000001799RPA19961.463Propithecus_coquereli
ENSHCOG00000001401rpa19960.323ENSPVAG00000002149RPA19960.032Pteropus_vampyrus
ENSHCOG00000001401rpa19975.490ENSPNYG00000016316rpa19975.490Pundamilia_nyererei
ENSHCOG00000001401rpa19955.956ENSPNYG00000024165RPA19956.338Pundamilia_nyererei
ENSHCOG00000001401rpa19962.975ENSPNAG00000008599rpa19664.261Pygocentrus_nattereri
ENSHCOG00000001401rpa19665.700ENSRNOG00000003123Rpa19960.454Rattus_norvegicus
ENSHCOG00000001401rpa19961.364ENSRBIG00000036587RPA19961.039Rhinopithecus_bieti
ENSHCOG00000001401rpa19957.050ENSRROG00000043278RPA19956.726Rhinopithecus_roxellana
ENSHCOG00000001401rpa19731.967YAR007CRFA19731.691Saccharomyces_cerevisiae
ENSHCOG00000001401rpa19161.947ENSSBOG00000030233RPA19661.189Saimiri_boliviensis_boliviensis
ENSHCOG00000001401rpa19661.448ENSSHAG00000007969RPA19561.214Sarcophilus_harrisii
ENSHCOG00000001401rpa19971.522ENSSFOG00015005362rpa19270.164Scleropages_formosus
ENSHCOG00000001401rpa19954.351ENSSMAG00000019746RPA18365.604Scophthalmus_maximus
ENSHCOG00000001401rpa110075.530ENSSDUG00000011949rpa110075.530Seriola_dumerili
ENSHCOG00000001401rpa19953.116ENSSDUG00000016358RPA19263.946Seriola_dumerili
ENSHCOG00000001401rpa110075.530ENSSLDG00000011806rpa110075.530Seriola_lalandi_dorsalis
ENSHCOG00000001401rpa19952.786ENSSLDG00000020784RPA19163.657Seriola_lalandi_dorsalis
ENSHCOG00000001401rpa19649.917ENSSARG00000007506RPA19749.069Sorex_araneus
ENSHCOG00000001401rpa19759.160ENSSPUG00000007223RPA19858.992Sphenodon_punctatus
ENSHCOG00000001401rpa19857.072ENSSPAG00000011165RPA19954.886Stegastes_partitus
ENSHCOG00000001401rpa110074.715ENSSPAG00000009903rpa110074.715Stegastes_partitus
ENSHCOG00000001401rpa19960.098ENSSSCG00000017822RPA19862.000Sus_scrofa
ENSHCOG00000001401rpa19959.672ENSTGUG00000005775RPA19959.344Taeniopygia_guttata
ENSHCOG00000001401rpa19957.280ENSTRUG00000000405RPA19163.739Takifugu_rubripes
ENSHCOG00000001401rpa19974.262ENSTRUG00000003616rpa19973.934Takifugu_rubripes
ENSHCOG00000001401rpa110076.059ENSTNIG00000016199rpa19976.221Tetraodon_nigroviridis
ENSHCOG00000001401rpa17168.433ENSTBEG00000002709RPA17368.433Tupaia_belangeri
ENSHCOG00000001401rpa19960.064ENSTTRG00000001169RPA19960.096Tursiops_truncatus
ENSHCOG00000001401rpa18665.385ENSUAMG00000015676RPA19565.385Ursus_americanus
ENSHCOG00000001401rpa19960.458ENSUMAG00000009328RPA19960.784Ursus_maritimus
ENSHCOG00000001401rpa19959.740ENSVPAG00000009443RPA19959.420Vicugna_pacos
ENSHCOG00000001401rpa19961.175ENSVVUG00000021715RPA19960.848Vulpes_vulpes
ENSHCOG00000001401rpa19963.149ENSXETG00000013538rpa19963.934Xenopus_tropicalis
ENSHCOG00000001401rpa19557.633ENSXCOG00000009899-7966.059Xiphophorus_couchianus
ENSHCOG00000001401rpa19371.902ENSXCOG00000010068rpa19472.077Xiphophorus_couchianus
ENSHCOG00000001401rpa110072.757ENSXMAG00000004102rpa110073.730Xiphophorus_maculatus
ENSHCOG00000001401rpa19266.059ENSXMAG00000010333RPA17966.059Xiphophorus_maculatus

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