EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001432 (Gene tree)
Gene ID: 109518506
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10634 bases
Position: chrKV880049.1:2180534-2191167
Accession: 109518506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000595	AARP2CN	PF08142.12	1.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013526	-	2394	XM_019874374	ENSHCOP00000000595	797 (aa)	XP_019729933	-

Gene Model

Click here to download ENSHCOG00000001432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001432	tsr1	97	56.587	ENSG00000167721	TSR1	98	56.838	Homo_sapiens
ENSHCOG00000001432	tsr1	100	80.599	ENSAPOG00000020891	tsr1	100	81.557	Acanthochromis_polyacanthus
ENSHCOG00000001432	tsr1	99	54.835	ENSAMEG00000007599	TSR1	99	54.590	Ailuropoda_melanoleuca
ENSHCOG00000001432	tsr1	100	81.450	ENSACIG00000007090	tsr1	100	81.941	Amphilophus_citrinellus
ENSHCOG00000001432	tsr1	100	81.348	ENSAOCG00000023284	tsr1	100	81.588	Amphiprion_ocellaris
ENSHCOG00000001432	tsr1	93	80.491	ENSAPEG00000008452	tsr1	100	80.749	Amphiprion_percula
ENSHCOG00000001432	tsr1	100	80.884	ENSATEG00000021961	tsr1	100	81.004	Anabas_testudineus
ENSHCOG00000001432	tsr1	91	59.438	ENSAPLG00000013422	TSR1	100	59.973	Anas_platyrhynchos
ENSHCOG00000001432	tsr1	70	50.940	ENSACAG00000000859	TSR1	92	50.598	Anolis_carolinensis
ENSHCOG00000001432	tsr1	97	56.696	ENSANAG00000031071	TSR1	98	57.071	Aotus_nancymaae
ENSHCOG00000001432	tsr1	100	80.918	ENSACLG00000007595	tsr1	99	80.797	Astatotilapia_calliptera
ENSHCOG00000001432	tsr1	52	72.857	ENSAMXG00000008470	tsr1	90	72.642	Astyanax_mexicanus
ENSHCOG00000001432	tsr1	99	57.001	ENSBTAG00000004225	TSR1	99	57.178	Bos_taurus
ENSHCOG00000001432	tsr1	96	39.494	WBGene00006497	tag-151	96	38.987	Caenorhabditis_elegans
ENSHCOG00000001432	tsr1	97	56.085	ENSCJAG00000012456	TSR1	98	56.462	Callithrix_jacchus
ENSHCOG00000001432	tsr1	99	55.941	ENSCAFG00000002106	-	99	55.817	Canis_familiaris
ENSHCOG00000001432	tsr1	89	53.699	ENSCAFG00000019273	-	100	58.422	Canis_familiaris
ENSHCOG00000001432	tsr1	99	55.817	ENSCAFG00020009728	TSR1	99	55.693	Canis_lupus_dingo
ENSHCOG00000001432	tsr1	99	57.054	ENSCHIG00000023935	TSR1	99	57.054	Capra_hircus
ENSHCOG00000001432	tsr1	99	56.382	ENSTSYG00000005468	TSR1	99	56.753	Carlito_syrichta
ENSHCOG00000001432	tsr1	92	55.467	ENSCPOG00000014833	TSR1	99	55.467	Cavia_porcellus
ENSHCOG00000001432	tsr1	92	55.186	ENSCCAG00000028962	TSR1	98	55.585	Cebus_capucinus
ENSHCOG00000001432	tsr1	98	56.946	ENSCATG00000044262	TSR1	99	56.696	Cercocebus_atys
ENSHCOG00000001432	tsr1	99	56.914	ENSCLAG00000005567	TSR1	99	56.914	Chinchilla_lanigera
ENSHCOG00000001432	tsr1	98	57.071	ENSCSAG00000013788	TSR1	99	56.821	Chlorocebus_sabaeus
ENSHCOG00000001432	tsr1	98	56.149	ENSCPBG00000020363	TSR1	97	56.897	Chrysemys_picta_bellii
ENSHCOG00000001432	tsr1	97	44.969	ENSCING00000020658	-	100	44.458	Ciona_intestinalis
ENSHCOG00000001432	tsr1	96	43.766	ENSCSAVG00000001875	-	100	44.233	Ciona_savignyi
ENSHCOG00000001432	tsr1	98	54.662	ENSCANG00000033056	TSR1	98	54.151	Colobus_angolensis_palliatus
ENSHCOG00000001432	tsr1	99	55.886	ENSCGRG00001023942	Tsr1	99	55.638	Cricetulus_griseus_chok1gshd
ENSHCOG00000001432	tsr1	99	54.867	ENSCGRG00000013015	Tsr1	99	54.741	Cricetulus_griseus_crigri
ENSHCOG00000001432	tsr1	100	77.470	ENSCSEG00000013009	tsr1	100	78.072	Cynoglossus_semilaevis
ENSHCOG00000001432	tsr1	100	78.235	ENSCVAG00000000506	tsr1	100	78.356	Cyprinodon_variegatus
ENSHCOG00000001432	tsr1	100	74.061	ENSDARG00000007744	tsr1	100	74.061	Danio_rerio
ENSHCOG00000001432	tsr1	99	57.497	ENSDNOG00000004715	TSR1	99	60.029	Dasypus_novemcinctus
ENSHCOG00000001432	tsr1	96	50.131	ENSDORG00000023234	-	99	48.974	Dipodomys_ordii
ENSHCOG00000001432	tsr1	99	55.886	ENSDORG00000016371	-	99	56.010	Dipodomys_ordii
ENSHCOG00000001432	tsr1	96	43.851	FBgn0037073	Tsr1	96	43.602	Drosophila_melanogaster
ENSHCOG00000001432	tsr1	92	67.869	ENSETEG00000017534	TSR1	89	67.541	Echinops_telfairi
ENSHCOG00000001432	tsr1	95	51.799	ENSEBUG00000013731	TSR1	98	51.414	Eptatretus_burgeri
ENSHCOG00000001432	tsr1	99	56.863	ENSEASG00005009302	TSR1	98	56.985	Equus_asinus_asinus
ENSHCOG00000001432	tsr1	99	56.984	ENSECAG00000009114	TSR1	99	57.108	Equus_caballus
ENSHCOG00000001432	tsr1	100	74.038	ENSELUG00000020984	tsr1	96	73.918	Esox_lucius
ENSHCOG00000001432	tsr1	99	56.079	ENSFCAG00000006313	TSR1	99	56.079	Felis_catus
ENSHCOG00000001432	tsr1	100	58.202	ENSFALG00000006532	TSR1	99	58.323	Ficedula_albicollis
ENSHCOG00000001432	tsr1	99	56.436	ENSFDAG00000006038	TSR1	99	56.064	Fukomys_damarensis
ENSHCOG00000001432	tsr1	100	76.287	ENSFHEG00000003626	tsr1	99	76.647	Fundulus_heteroclitus
ENSHCOG00000001432	tsr1	100	72.304	ENSGMOG00000010336	tsr1	100	72.426	Gadus_morhua
ENSHCOG00000001432	tsr1	100	76.655	ENSGAFG00000012993	tsr1	99	77.617	Gambusia_affinis
ENSHCOG00000001432	tsr1	100	78.441	ENSGACG00000010843	tsr1	100	79.050	Gasterosteus_aculeatus
ENSHCOG00000001432	tsr1	98	57.375	ENSGAGG00000025619	-	99	57.497	Gopherus_agassizii
ENSHCOG00000001432	tsr1	97	56.964	ENSGGOG00000001704	TSR1	98	56.964	Gorilla_gorilla
ENSHCOG00000001432	tsr1	100	80.626	ENSHBUG00000017904	tsr1	100	80.103	Haplochromis_burtoni
ENSHCOG00000001432	tsr1	99	56.559	ENSHGLG00000012806	-	99	56.683	Heterocephalus_glaber_female
ENSHCOG00000001432	tsr1	96	49.681	ENSHGLG00000015688	-	98	49.174	Heterocephalus_glaber_female
ENSHCOG00000001432	tsr1	99	56.559	ENSHGLG00100015392	TSR1	99	56.683	Heterocephalus_glaber_male
ENSHCOG00000001432	tsr1	100	72.488	ENSIPUG00000004618	tsr1	100	73.238	Ictalurus_punctatus
ENSHCOG00000001432	tsr1	99	56.860	ENSSTOG00000011819	TSR1	99	56.984	Ictidomys_tridecemlineatus
ENSHCOG00000001432	tsr1	91	54.852	ENSJJAG00000019505	Tsr1	95	54.987	Jaculus_jaculus
ENSHCOG00000001432	tsr1	100	77.458	ENSKMAG00000005763	tsr1	99	78.313	Kryptolebias_marmoratus
ENSHCOG00000001432	tsr1	100	80.000	ENSLBEG00000021823	tsr1	99	80.240	Labrus_bergylta
ENSHCOG00000001432	tsr1	99	58.080	ENSLACG00000002197	TSR1	99	57.959	Latimeria_chalumnae
ENSHCOG00000001432	tsr1	90	72.000	ENSLOCG00000006491	TSR1	98	72.000	Lepisosteus_oculatus
ENSHCOG00000001432	tsr1	98	57.196	ENSMFAG00000021330	TSR1	99	56.946	Macaca_fascicularis
ENSHCOG00000001432	tsr1	98	57.071	ENSMMUG00000017519	TSR1	99	56.821	Macaca_mulatta
ENSHCOG00000001432	tsr1	98	57.071	ENSMNEG00000031382	TSR1	99	56.821	Macaca_nemestrina
ENSHCOG00000001432	tsr1	98	56.821	ENSMLEG00000036733	TSR1	99	56.571	Mandrillus_leucophaeus
ENSHCOG00000001432	tsr1	100	81.049	ENSMAMG00000017918	tsr1	99	80.930	Mastacembelus_armatus
ENSHCOG00000001432	tsr1	100	80.602	ENSMZEG00005007477	tsr1	100	80.482	Maylandia_zebra
ENSHCOG00000001432	tsr1	100	57.108	ENSMGAG00000005576	TSR1	100	57.837	Meleagris_gallopavo
ENSHCOG00000001432	tsr1	99	56.860	ENSMICG00000012943	TSR1	99	56.860	Microcebus_murinus
ENSHCOG00000001432	tsr1	99	55.886	ENSMOCG00000022764	Tsr1	99	56.010	Microtus_ochrogaster
ENSHCOG00000001432	tsr1	100	82.403	ENSMMOG00000014280	tsr1	100	83.010	Mola_mola
ENSHCOG00000001432	tsr1	98	57.231	ENSMODG00000010658	TSR1	99	57.108	Monodelphis_domestica
ENSHCOG00000001432	tsr1	100	79.137	ENSMALG00000011681	tsr1	100	80.576	Monopterus_albus
ENSHCOG00000001432	tsr1	99	56.258	MGP_CAROLIEiJ_G0016727	Tsr1	99	56.506	Mus_caroli
ENSHCOG00000001432	tsr1	99	56.506	ENSMUSG00000038335	Tsr1	99	56.753	Mus_musculus
ENSHCOG00000001432	tsr1	99	56.629	MGP_PahariEiJ_G0017864	Tsr1	99	56.877	Mus_pahari
ENSHCOG00000001432	tsr1	99	56.506	MGP_SPRETEiJ_G0017570	Tsr1	99	56.753	Mus_spretus
ENSHCOG00000001432	tsr1	80	58.850	ENSMPUG00000013000	TSR1	100	58.699	Mustela_putorius_furo
ENSHCOG00000001432	tsr1	99	57.426	ENSMLUG00000003505	TSR1	99	57.716	Myotis_lucifugus
ENSHCOG00000001432	tsr1	100	80.769	ENSNBRG00000020728	tsr1	99	80.889	Neolamprologus_brichardi
ENSHCOG00000001432	tsr1	97	55.513	ENSNLEG00000017184	TSR1	98	55.385	Nomascus_leucogenys
ENSHCOG00000001432	tsr1	99	54.131	ENSMEUG00000015828	TSR1	99	54.187	Notamacropus_eugenii
ENSHCOG00000001432	tsr1	100	80.072	ENSONIG00000013131	tsr1	100	80.556	Oreochromis_niloticus
ENSHCOG00000001432	tsr1	95	56.291	ENSOANG00000008637	TSR1	100	55.253	Ornithorhynchus_anatinus
ENSHCOG00000001432	tsr1	99	56.720	ENSOCUG00000014256	TSR1	99	56.843	Oryctolagus_cuniculus
ENSHCOG00000001432	tsr1	100	77.163	ENSORLG00000004926	tsr1	99	78.125	Oryzias_latipes
ENSHCOG00000001432	tsr1	100	77.256	ENSORLG00020008792	tsr1	99	78.219	Oryzias_latipes_hni
ENSHCOG00000001432	tsr1	100	77.284	ENSORLG00015013838	tsr1	99	78.245	Oryzias_latipes_hsok
ENSHCOG00000001432	tsr1	100	77.524	ENSOMEG00000004830	tsr1	99	77.524	Oryzias_melastigma
ENSHCOG00000001432	tsr1	99	55.814	ENSOGAG00000004492	TSR1	99	56.059	Otolemur_garnettii
ENSHCOG00000001432	tsr1	99	57.426	ENSOARG00000015437	TSR1	97	57.426	Ovis_aries
ENSHCOG00000001432	tsr1	97	56.587	ENSPPAG00000036355	TSR1	98	56.838	Pan_paniscus
ENSHCOG00000001432	tsr1	99	55.831	ENSPPRG00000015519	-	99	55.831	Panthera_pardus
ENSHCOG00000001432	tsr1	99	55.831	ENSPTIG00000010608	TSR1	99	55.831	Panthera_tigris_altaica
ENSHCOG00000001432	tsr1	97	56.587	ENSPTRG00000008547	TSR1	98	56.838	Pan_troglodytes
ENSHCOG00000001432	tsr1	98	54.318	ENSPANG00000024463	TSR1	98	54.010	Papio_anubis
ENSHCOG00000001432	tsr1	100	71.731	ENSPKIG00000013972	tsr1	100	71.731	Paramormyrops_kingsleyae
ENSHCOG00000001432	tsr1	86	56.841	ENSPSIG00000018258	TSR1	99	57.103	Pelodiscus_sinensis
ENSHCOG00000001432	tsr1	99	78.967	ENSPMGG00000011577	tsr1	99	78.844	Periophthalmus_magnuspinnatus
ENSHCOG00000001432	tsr1	99	55.638	ENSPEMG00000018033	Tsr1	99	55.886	Peromyscus_maniculatus_bairdii
ENSHCOG00000001432	tsr1	99	57.565	ENSPCIG00000009357	TSR1	97	57.407	Phascolarctos_cinereus
ENSHCOG00000001432	tsr1	100	78.450	ENSPFOG00000004483	TSR1	100	78.571	Poecilia_formosa
ENSHCOG00000001432	tsr1	100	78.928	ENSPLAG00000022320	tsr1	100	79.302	Poecilia_latipinna
ENSHCOG00000001432	tsr1	100	77.153	ENSPMEG00000004577	tsr1	99	77.512	Poecilia_mexicana
ENSHCOG00000001432	tsr1	97	76.847	ENSPREG00000010354	tsr1	96	77.368	Poecilia_reticulata
ENSHCOG00000001432	tsr1	97	51.925	ENSPPYG00000007792	TSR1	98	52.298	Pongo_abelii
ENSHCOG00000001432	tsr1	53	66.667	ENSPCAG00000012973	-	69	70.000	Procavia_capensis
ENSHCOG00000001432	tsr1	99	56.064	ENSPCOG00000017928	TSR1	99	56.436	Propithecus_coquereli
ENSHCOG00000001432	tsr1	99	56.506	ENSPVAG00000002162	TSR1	99	56.506	Pteropus_vampyrus
ENSHCOG00000001432	tsr1	100	81.039	ENSPNYG00000016163	tsr1	99	80.918	Pundamilia_nyererei
ENSHCOG00000001432	tsr1	99	73.381	ENSPNAG00000008659	tsr1	99	73.861	Pygocentrus_nattereri
ENSHCOG00000001432	tsr1	99	56.188	ENSRNOG00000002980	Tsr1	99	55.569	Rattus_norvegicus
ENSHCOG00000001432	tsr1	98	57.196	ENSRBIG00000040016	TSR1	99	56.070	Rhinopithecus_bieti
ENSHCOG00000001432	tsr1	98	57.196	ENSRROG00000030361	TSR1	99	56.070	Rhinopithecus_roxellana
ENSHCOG00000001432	tsr1	95	31.078	YDL060W	-	98	30.895	Saccharomyces_cerevisiae
ENSHCOG00000001432	tsr1	97	56.571	ENSSBOG00000020785	TSR1	98	57.196	Saimiri_boliviensis_boliviensis
ENSHCOG00000001432	tsr1	99	58.272	ENSSHAG00000011394	TSR1	99	58.693	Sarcophilus_harrisii
ENSHCOG00000001432	tsr1	100	73.058	ENSSFOG00015005455	tsr1	100	73.569	Scleropages_formosus
ENSHCOG00000001432	tsr1	100	78.177	ENSSMAG00000009504	tsr1	100	78.417	Scophthalmus_maximus
ENSHCOG00000001432	tsr1	100	81.198	ENSSDUG00000012074	tsr1	99	82.275	Seriola_dumerili
ENSHCOG00000001432	tsr1	100	82.593	ENSSLDG00000002031	tsr1	99	82.713	Seriola_lalandi_dorsalis
ENSHCOG00000001432	tsr1	92	56.175	ENSSARG00000000759	TSR1	93	56.175	Sorex_araneus
ENSHCOG00000001432	tsr1	100	56.988	ENSSPUG00000007042	TSR1	100	57.627	Sphenodon_punctatus
ENSHCOG00000001432	tsr1	100	80.765	ENSSPAG00000021951	tsr1	100	81.362	Stegastes_partitus
ENSHCOG00000001432	tsr1	99	56.559	ENSSSCG00000038534	TSR1	99	56.597	Sus_scrofa
ENSHCOG00000001432	tsr1	89	60.354	ENSTGUG00000005883	TSR1	100	60.899	Taeniopygia_guttata
ENSHCOG00000001432	tsr1	100	79.565	ENSTRUG00000004665	tsr1	100	79.444	Takifugu_rubripes
ENSHCOG00000001432	tsr1	99	80.697	ENSTNIG00000016196	tsr1	100	81.320	Tetraodon_nigroviridis
ENSHCOG00000001432	tsr1	65	70.000	ENSTBEG00000015275	-	66	70.000	Tupaia_belangeri
ENSHCOG00000001432	tsr1	99	56.559	ENSTTRG00000001177	TSR1	99	56.931	Tursiops_truncatus
ENSHCOG00000001432	tsr1	99	55.556	ENSUAMG00000025160	TSR1	99	55.172	Ursus_americanus
ENSHCOG00000001432	tsr1	95	55.584	ENSUMAG00000009294	TSR1	98	55.186	Ursus_maritimus
ENSHCOG00000001432	tsr1	82	51.662	ENSVPAG00000000228	TSR1	99	50.966	Vicugna_pacos
ENSHCOG00000001432	tsr1	99	55.941	ENSVVUG00000021767	TSR1	99	55.817	Vulpes_vulpes
ENSHCOG00000001432	tsr1	99	53.204	ENSXETG00000023797	tsr1	100	53.491	Xenopus_tropicalis
ENSHCOG00000001432	tsr1	100	79.024	ENSXCOG00000009635	tsr1	100	78.902	Xiphophorus_couchianus
ENSHCOG00000001432	tsr1	100	77.136	ENSXMAG00000001397	tsr1	97	77.497	Xiphophorus_maculatus