EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001520 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain-containing protein 1-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6675 bases
Position: chrKV880234.1:194447-201121
Accession: 109525087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000640	YTH	PF04146.15	5e-42	1	1
ENSHCOP00000017572	YTH	PF04146.15	7.5e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013425	-	1689	-	ENSHCOP00000017572	562 (aa)	-	-
ENSHCOT00000013433	-	1533	XM_019885352	ENSHCOP00000000640	510 (aa)	XP_019740911	-

Gene Model

Click here to download ENSHCOG00000001520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001520	ythdc1	84	70.213	ENSG00000083896	YTHDC1	54	70.213	Homo_sapiens
ENSHCOG00000001520	ythdc1	89	68.529	ENSAPOG00000013997	ythdc1	68	70.757	Acanthochromis_polyacanthus
ENSHCOG00000001520	ythdc1	84	70.213	ENSAMEG00000005688	YTHDC1	53	70.213	Ailuropoda_melanoleuca
ENSHCOG00000001520	ythdc1	90	71.637	ENSACIG00000019728	ythdc1	74	70.833	Amphilophus_citrinellus
ENSHCOG00000001520	ythdc1	89	78.000	ENSAOCG00000000239	ythdc1	70	80.357	Amphiprion_ocellaris
ENSHCOG00000001520	ythdc1	75	81.685	ENSAPEG00000000618	ythdc1	56	81.985	Amphiprion_percula
ENSHCOG00000001520	ythdc1	83	74.062	ENSATEG00000023007	ythdc1	57	81.852	Anabas_testudineus
ENSHCOG00000001520	ythdc1	82	70.270	ENSAPLG00000009921	YTHDC1	54	70.270	Anas_platyrhynchos
ENSHCOG00000001520	ythdc1	86	68.085	ENSACAG00000009697	YTHDC1	69	68.085	Anolis_carolinensis
ENSHCOG00000001520	ythdc1	84	70.213	ENSANAG00000001522	YTHDC1	54	70.213	Aotus_nancymaae
ENSHCOG00000001520	ythdc1	88	76.286	ENSACLG00000019371	ythdc1	69	79.847	Astatotilapia_calliptera
ENSHCOG00000001520	ythdc1	88	68.391	ENSAMXG00000006978	ythdc1	59	66.571	Astyanax_mexicanus
ENSHCOG00000001520	ythdc1	84	70.213	ENSBTAG00000015572	YTHDC1	53	70.213	Bos_taurus
ENSHCOG00000001520	ythdc1	84	70.213	ENSCJAG00000009934	YTHDC1	54	70.213	Callithrix_jacchus
ENSHCOG00000001520	ythdc1	84	70.213	ENSCAFG00000002821	YTHDC1	53	70.213	Canis_familiaris
ENSHCOG00000001520	ythdc1	84	70.213	ENSCAFG00020027112	YTHDC1	55	70.213	Canis_lupus_dingo
ENSHCOG00000001520	ythdc1	84	70.213	ENSTSYG00000011668	YTHDC1	54	70.213	Carlito_syrichta
ENSHCOG00000001520	ythdc1	84	70.213	ENSCPOG00000010929	YTHDC1	56	70.213	Cavia_porcellus
ENSHCOG00000001520	ythdc1	84	70.213	ENSCCAG00000035754	YTHDC1	54	70.213	Cebus_capucinus
ENSHCOG00000001520	ythdc1	84	70.213	ENSCATG00000036320	YTHDC1	54	70.213	Cercocebus_atys
ENSHCOG00000001520	ythdc1	82	67.568	ENSCLAG00000005482	YTHDC1	53	67.568	Chinchilla_lanigera
ENSHCOG00000001520	ythdc1	84	70.213	ENSCSAG00000005252	YTHDC1	53	70.213	Chlorocebus_sabaeus
ENSHCOG00000001520	ythdc1	83	68.293	ENSCPBG00000021965	YTHDC1	55	68.293	Chrysemys_picta_bellii
ENSHCOG00000001520	ythdc1	84	70.213	ENSCANG00000004769	YTHDC1	54	70.213	Colobus_angolensis_palliatus
ENSHCOG00000001520	ythdc1	84	70.213	ENSCGRG00001000816	Ythdc1	54	70.213	Cricetulus_griseus_chok1gshd
ENSHCOG00000001520	ythdc1	82	68.421	ENSCGRG00000009807	Ythdc1	53	68.421	Cricetulus_griseus_crigri
ENSHCOG00000001520	ythdc1	93	75.532	ENSCSEG00000020404	ythdc1	68	77.949	Cynoglossus_semilaevis
ENSHCOG00000001520	ythdc1	88	80.460	ENSCVAG00000022349	ythdc1	70	78.205	Cyprinodon_variegatus
ENSHCOG00000001520	ythdc1	75	70.213	ENSDARG00000051953	ythdc1	58	70.213	Danio_rerio
ENSHCOG00000001520	ythdc1	84	70.213	ENSDNOG00000004949	YTHDC1	54	70.213	Dasypus_novemcinctus
ENSHCOG00000001520	ythdc1	82	67.568	ENSDORG00000013045	Ythdc1	53	67.568	Dipodomys_ordii
ENSHCOG00000001520	ythdc1	84	70.213	ENSEASG00005018383	YTHDC1	53	70.213	Equus_asinus_asinus
ENSHCOG00000001520	ythdc1	84	70.213	ENSECAG00000018303	YTHDC1	53	70.213	Equus_caballus
ENSHCOG00000001520	ythdc1	84	68.085	ENSEEUG00000015466	YTHDC1	69	68.085	Erinaceus_europaeus
ENSHCOG00000001520	ythdc1	75	74.468	ENSELUG00000014029	ythdc1	65	74.468	Esox_lucius
ENSHCOG00000001520	ythdc1	84	70.213	ENSFCAG00000026791	YTHDC1	54	70.213	Felis_catus
ENSHCOG00000001520	ythdc1	93	54.049	ENSFALG00000006581	YTHDC1	87	53.427	Ficedula_albicollis
ENSHCOG00000001520	ythdc1	82	67.568	ENSFDAG00000018560	YTHDC1	54	67.568	Fukomys_damarensis
ENSHCOG00000001520	ythdc1	63	68.981	ENSFHEG00000001286	ythdc1	57	75.806	Fundulus_heteroclitus
ENSHCOG00000001520	ythdc1	71	75.000	ENSGMOG00000018815	ythdc1	52	84.795	Gadus_morhua
ENSHCOG00000001520	ythdc1	82	70.270	ENSGALG00000035906	YTHDC1	51	70.270	Gallus_gallus
ENSHCOG00000001520	ythdc1	57	87.368	ENSGAFG00000001759	ythdc1	55	87.368	Gambusia_affinis
ENSHCOG00000001520	ythdc1	93	66.492	ENSGACG00000015486	ythdc1	66	64.929	Gasterosteus_aculeatus
ENSHCOG00000001520	ythdc1	84	63.830	ENSGAGG00000007108	YTHDC1	55	70.270	Gopherus_agassizii
ENSHCOG00000001520	ythdc1	84	70.213	ENSGGOG00000021958	YTHDC1	54	70.213	Gorilla_gorilla
ENSHCOG00000001520	ythdc1	88	76.286	ENSHBUG00000019288	ythdc1	69	79.847	Haplochromis_burtoni
ENSHCOG00000001520	ythdc1	83	68.750	ENSHGLG00000003239	-	56	61.905	Heterocephalus_glaber_female
ENSHCOG00000001520	ythdc1	84	70.213	ENSHGLG00000006319	-	54	70.213	Heterocephalus_glaber_female
ENSHCOG00000001520	ythdc1	84	70.213	ENSHGLG00100001556	-	55	70.213	Heterocephalus_glaber_male
ENSHCOG00000001520	ythdc1	83	68.750	ENSHGLG00100008060	-	57	61.905	Heterocephalus_glaber_male
ENSHCOG00000001520	ythdc1	80	74.468	ENSIPUG00000018136	ythdc1	67	74.468	Ictalurus_punctatus
ENSHCOG00000001520	ythdc1	84	70.213	ENSSTOG00000013652	YTHDC1	54	70.213	Ictidomys_tridecemlineatus
ENSHCOG00000001520	ythdc1	82	68.421	ENSJJAG00000010268	Ythdc1	54	68.421	Jaculus_jaculus
ENSHCOG00000001520	ythdc1	65	75.568	ENSKMAG00000006483	ythdc1	82	77.919	Kryptolebias_marmoratus
ENSHCOG00000001520	ythdc1	80	72.832	ENSLBEG00000020831	ythdc1	82	83.871	Labrus_bergylta
ENSHCOG00000001520	ythdc1	66	61.732	ENSLACG00000004893	YTHDC1	66	52.033	Latimeria_chalumnae
ENSHCOG00000001520	ythdc1	88	65.130	ENSLOCG00000003045	ythdc1	65	74.468	Lepisosteus_oculatus
ENSHCOG00000001520	ythdc1	84	70.213	ENSLAFG00000021592	YTHDC1	59	68.421	Loxodonta_africana
ENSHCOG00000001520	ythdc1	84	70.213	ENSMFAG00000031927	YTHDC1	54	70.213	Macaca_fascicularis
ENSHCOG00000001520	ythdc1	84	70.213	ENSMMUG00000002265	YTHDC1	53	70.213	Macaca_mulatta
ENSHCOG00000001520	ythdc1	84	70.213	ENSMNEG00000033751	YTHDC1	54	70.213	Macaca_nemestrina
ENSHCOG00000001520	ythdc1	84	70.213	ENSMLEG00000042147	YTHDC1	54	70.213	Mandrillus_leucophaeus
ENSHCOG00000001520	ythdc1	88	77.493	ENSMAMG00000013122	ythdc1	67	80.102	Mastacembelus_armatus
ENSHCOG00000001520	ythdc1	88	76.286	ENSMZEG00005023173	ythdc1	69	79.847	Maylandia_zebra
ENSHCOG00000001520	ythdc1	84	72.340	ENSMGAG00000010391	YTHDC1	55	72.340	Meleagris_gallopavo
ENSHCOG00000001520	ythdc1	84	70.213	ENSMAUG00000001286	Ythdc1	54	70.213	Mesocricetus_auratus
ENSHCOG00000001520	ythdc1	84	70.213	ENSMICG00000034640	YTHDC1	54	70.213	Microcebus_murinus
ENSHCOG00000001520	ythdc1	84	70.213	ENSMOCG00000020201	Ythdc1	70	70.213	Microtus_ochrogaster
ENSHCOG00000001520	ythdc1	65	90.521	ENSMMOG00000021200	ythdc1	66	72.900	Mola_mola
ENSHCOG00000001520	ythdc1	84	41.357	ENSMODG00000009173	-	70	47.024	Monodelphis_domestica
ENSHCOG00000001520	ythdc1	84	72.340	ENSMODG00000020754	-	71	72.340	Monodelphis_domestica
ENSHCOG00000001520	ythdc1	63	44.737	ENSMODG00000004117	-	60	61.386	Monodelphis_domestica
ENSHCOG00000001520	ythdc1	95	40.472	ENSMODG00000010076	-	52	47.967	Monodelphis_domestica
ENSHCOG00000001520	ythdc1	76	80.851	ENSMALG00000013412	ythdc1	62	81.227	Monopterus_albus
ENSHCOG00000001520	ythdc1	84	70.213	MGP_CAROLIEiJ_G0027347	Ythdc1	54	70.213	Mus_caroli
ENSHCOG00000001520	ythdc1	84	70.213	ENSMUSG00000035851	Ythdc1	54	70.213	Mus_musculus
ENSHCOG00000001520	ythdc1	84	70.213	MGP_PahariEiJ_G0017126	Ythdc1	54	70.213	Mus_pahari
ENSHCOG00000001520	ythdc1	84	70.213	MGP_SPRETEiJ_G0028339	Ythdc1	54	70.213	Mus_spretus
ENSHCOG00000001520	ythdc1	84	70.213	ENSMPUG00000001743	YTHDC1	58	70.213	Mustela_putorius_furo
ENSHCOG00000001520	ythdc1	82	67.568	ENSMLUG00000016300	YTHDC1	53	67.568	Myotis_lucifugus
ENSHCOG00000001520	ythdc1	66	76.232	ENSNBRG00000007663	ythdc1	67	82.283	Neolamprologus_brichardi
ENSHCOG00000001520	ythdc1	82	65.789	ENSNLEG00000009202	YTHDC1	53	65.789	Nomascus_leucogenys
ENSHCOG00000001520	ythdc1	84	70.213	ENSODEG00000001715	YTHDC1	54	70.213	Octodon_degus
ENSHCOG00000001520	ythdc1	88	76.857	ENSONIG00000012651	ythdc1	69	80.357	Oreochromis_niloticus
ENSHCOG00000001520	ythdc1	77	57.482	ENSOANG00000014398	YTHDC1	55	54.976	Ornithorhynchus_anatinus
ENSHCOG00000001520	ythdc1	87	70.213	ENSOCUG00000015886	YTHDC1	62	70.213	Oryctolagus_cuniculus
ENSHCOG00000001520	ythdc1	88	80.460	ENSORLG00000030544	ythdc1	69	75.325	Oryzias_latipes
ENSHCOG00000001520	ythdc1	88	77.011	ENSORLG00020019316	ythdc1	69	75.844	Oryzias_latipes_hni
ENSHCOG00000001520	ythdc1	93	75.789	ENSOMEG00000000551	ythdc1	69	75.853	Oryzias_melastigma
ENSHCOG00000001520	ythdc1	84	70.213	ENSOGAG00000003362	YTHDC1	53	70.213	Otolemur_garnettii
ENSHCOG00000001520	ythdc1	84	70.213	ENSOARG00000008633	YTHDC1	53	70.213	Ovis_aries
ENSHCOG00000001520	ythdc1	84	70.213	ENSPPAG00000041315	YTHDC1	54	70.213	Pan_paniscus
ENSHCOG00000001520	ythdc1	84	70.213	ENSPPRG00000011979	YTHDC1	54	70.213	Panthera_pardus
ENSHCOG00000001520	ythdc1	82	67.568	ENSPTIG00000015527	YTHDC1	53	67.568	Panthera_tigris_altaica
ENSHCOG00000001520	ythdc1	84	70.213	ENSPTRG00000016105	YTHDC1	54	70.213	Pan_troglodytes
ENSHCOG00000001520	ythdc1	84	70.213	ENSPANG00000021590	YTHDC1	54	70.213	Papio_anubis
ENSHCOG00000001520	ythdc1	85	72.340	ENSPKIG00000018497	ythdc1	63	72.340	Paramormyrops_kingsleyae
ENSHCOG00000001520	ythdc1	82	71.053	ENSPSIG00000002782	YTHDC1	55	71.053	Pelodiscus_sinensis
ENSHCOG00000001520	ythdc1	60	75.556	ENSPMGG00000000970	-	86	60.732	Periophthalmus_magnuspinnatus
ENSHCOG00000001520	ythdc1	82	67.568	ENSPEMG00000013850	Ythdc1	53	67.568	Peromyscus_maniculatus_bairdii
ENSHCOG00000001520	ythdc1	84	72.340	ENSPCIG00000006870	YTHDC1	71	72.340	Phascolarctos_cinereus
ENSHCOG00000001520	ythdc1	89	77.586	ENSPFOG00000013404	ythdc1	71	79.487	Poecilia_formosa
ENSHCOG00000001520	ythdc1	65	77.586	ENSPLAG00000011079	ythdc1	82	79.487	Poecilia_latipinna
ENSHCOG00000001520	ythdc1	89	77.586	ENSPMEG00000009238	ythdc1	71	79.487	Poecilia_mexicana
ENSHCOG00000001520	ythdc1	88	70.175	ENSPREG00000016973	ythdc1	71	69.010	Poecilia_reticulata
ENSHCOG00000001520	ythdc1	75	58.603	ENSPPYG00000014726	YTHDC1	54	59.889	Pongo_abelii
ENSHCOG00000001520	ythdc1	75	70.213	ENSPCOG00000019105	YTHDC1	54	70.213	Propithecus_coquereli
ENSHCOG00000001520	ythdc1	84	70.213	ENSPVAG00000015551	YTHDC1	53	70.213	Pteropus_vampyrus
ENSHCOG00000001520	ythdc1	88	76.286	ENSPNYG00000011687	ythdc1	69	79.847	Pundamilia_nyererei
ENSHCOG00000001520	ythdc1	79	74.468	ENSPNAG00000028365	ythdc1	56	74.468	Pygocentrus_nattereri
ENSHCOG00000001520	ythdc1	84	70.213	ENSRNOG00000001996	Ythdc1	54	70.213	Rattus_norvegicus
ENSHCOG00000001520	ythdc1	83	63.158	ENSRBIG00000028279	YTHDC1	58	63.158	Rhinopithecus_bieti
ENSHCOG00000001520	ythdc1	84	70.213	ENSRROG00000035028	YTHDC1	54	70.213	Rhinopithecus_roxellana
ENSHCOG00000001520	ythdc1	84	70.213	ENSSBOG00000022353	YTHDC1	54	70.213	Saimiri_boliviensis_boliviensis
ENSHCOG00000001520	ythdc1	84	59.574	ENSSHAG00000002538	YTHDC1	54	71.053	Sarcophilus_harrisii
ENSHCOG00000001520	ythdc1	75	74.468	ENSSFOG00015003298	ythdc1	57	74.468	Scleropages_formosus
ENSHCOG00000001520	ythdc1	93	73.210	ENSSMAG00000009086	ythdc1	70	80.307	Scophthalmus_maximus
ENSHCOG00000001520	ythdc1	91	78.286	ENSSDUG00000022008	ythdc1	69	82.143	Seriola_dumerili
ENSHCOG00000001520	ythdc1	89	78.286	ENSSLDG00000007926	ythdc1	69	82.143	Seriola_lalandi_dorsalis
ENSHCOG00000001520	ythdc1	75	57.500	ENSSARG00000010960	YTHDC1	59	59.889	Sorex_araneus
ENSHCOG00000001520	ythdc1	88	65.957	ENSSPUG00000009357	YTHDC1	71	65.957	Sphenodon_punctatus
ENSHCOG00000001520	ythdc1	89	77.714	ENSSPAG00000011449	ythdc1	69	78.316	Stegastes_partitus
ENSHCOG00000001520	ythdc1	84	70.213	ENSSSCG00000035505	YTHDC1	69	70.213	Sus_scrofa
ENSHCOG00000001520	ythdc1	84	70.213	ENSTGUG00000004452	-	55	67.347	Taeniopygia_guttata
ENSHCOG00000001520	ythdc1	79	79.370	ENSTRUG00000010142	ythdc1	73	82.620	Takifugu_rubripes
ENSHCOG00000001520	ythdc1	79	82.979	ENSTNIG00000013243	ythdc1	70	75.881	Tetraodon_nigroviridis
ENSHCOG00000001520	ythdc1	87	61.702	ENSTBEG00000011546	YTHDC1	61	61.702	Tupaia_belangeri
ENSHCOG00000001520	ythdc1	84	70.213	ENSTTRG00000005083	YTHDC1	53	70.213	Tursiops_truncatus
ENSHCOG00000001520	ythdc1	75	59.352	ENSUAMG00000010388	YTHDC1	51	61.972	Ursus_americanus
ENSHCOG00000001520	ythdc1	82	65.789	ENSUMAG00000013668	YTHDC1	55	65.789	Ursus_maritimus
ENSHCOG00000001520	ythdc1	75	70.213	ENSVPAG00000009040	YTHDC1	54	70.213	Vicugna_pacos
ENSHCOG00000001520	ythdc1	82	68.421	ENSVVUG00000005387	YTHDC1	54	68.421	Vulpes_vulpes
ENSHCOG00000001520	ythdc1	84	64.583	ENSXETG00000017960	ythdc1	56	64.583	Xenopus_tropicalis
ENSHCOG00000001520	ythdc1	57	71.875	ENSXCOG00000000530	ythdc1	91	50.120	Xiphophorus_couchianus
ENSHCOG00000001520	ythdc1	86	77.299	ENSXMAG00000005196	ythdc1	69	79.897	Xiphophorus_maculatus