EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001548 (Gene tree)
Gene ID: 109510558
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 39753 bases
Position: chrKV880531.1:2059226-2098978
Accession: 109510558
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017626	DZF	PF07528.14	1.7e-64	1	1
ENSHCOP00000017626	zf-met	PF12874.7	2.2e-21	1	3
ENSHCOP00000017626	zf-met	PF12874.7	2.2e-21	2	3
ENSHCOP00000017626	zf-met	PF12874.7	2.2e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013371	-	3628	XM_019860946	ENSHCOP00000017626	1076 (aa)	XP_019716505	-

Gene Model

Click here to download ENSHCOG00000001548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001548	zfr	100	75.733	ENSG00000056097	ZFR	100	75.344	Homo_sapiens
ENSHCOG00000001548	zfr	100	79.374	ENSAPOG00000009740	zfr	100	78.885	Acanthochromis_polyacanthus
ENSHCOG00000001548	zfr	100	75.985	ENSAMEG00000006184	ZFR	100	75.252	Ailuropoda_melanoleuca
ENSHCOG00000001548	zfr	93	89.560	ENSACIG00000015926	zfr	84	81.946	Amphilophus_citrinellus
ENSHCOG00000001548	zfr	100	82.797	ENSAOCG00000013876	zfr	100	83.073	Amphiprion_ocellaris
ENSHCOG00000001548	zfr	100	85.925	ENSAPEG00000024383	zfr	100	86.201	Amphiprion_percula
ENSHCOG00000001548	zfr	100	86.242	ENSATEG00000010271	zfr	100	85.965	Anabas_testudineus
ENSHCOG00000001548	zfr	78	72.118	ENSAPLG00000015627	-	100	72.674	Anas_platyrhynchos
ENSHCOG00000001548	zfr	100	73.901	ENSACAG00000007880	ZFR	100	74.335	Anolis_carolinensis
ENSHCOG00000001548	zfr	100	75.733	ENSANAG00000023333	ZFR	100	75.344	Aotus_nancymaae
ENSHCOG00000001548	zfr	93	89.560	ENSACLG00000016832	zfr	84	81.594	Astatotilapia_calliptera
ENSHCOG00000001548	zfr	98	81.051	ENSAMXG00000019511	zfr	100	82.083	Astyanax_mexicanus
ENSHCOG00000001548	zfr	100	76.169	ENSBTAG00000008414	ZFR	96	81.375	Bos_taurus
ENSHCOG00000001548	zfr	100	75.733	ENSCJAG00000018740	ZFR	100	75.344	Callithrix_jacchus
ENSHCOG00000001548	zfr	100	74.406	ENSCAFG00000018886	ZFR	99	76.382	Canis_familiaris
ENSHCOG00000001548	zfr	100	75.985	ENSCAFG00020016859	-	100	75.252	Canis_lupus_dingo
ENSHCOG00000001548	zfr	100	76.260	ENSCHIG00000007710	ZFR	100	75.527	Capra_hircus
ENSHCOG00000001548	zfr	97	75.284	ENSTSYG00000010670	ZFR	99	75.239	Carlito_syrichta
ENSHCOG00000001548	zfr	96	60.962	ENSCAPG00000015655	ZFR	100	59.480	Cavia_aperea
ENSHCOG00000001548	zfr	89	76.359	ENSCPOG00000000862	ZFR	100	69.694	Cavia_porcellus
ENSHCOG00000001548	zfr	100	75.916	ENSCCAG00000024473	ZFR	100	75.527	Cebus_capucinus
ENSHCOG00000001548	zfr	100	75.733	ENSCATG00000038311	ZFR	100	75.344	Cercocebus_atys
ENSHCOG00000001548	zfr	97	75.473	ENSCLAG00000007408	ZFR	100	75.335	Chinchilla_lanigera
ENSHCOG00000001548	zfr	100	75.733	ENSCSAG00000017180	ZFR	100	75.344	Chlorocebus_sabaeus
ENSHCOG00000001548	zfr	89	63.802	ENSCHOG00000003848	ZFR	95	61.580	Choloepus_hoffmanni
ENSHCOG00000001548	zfr	100	76.944	ENSCPBG00000024211	ZFR	100	76.374	Chrysemys_picta_bellii
ENSHCOG00000001548	zfr	100	75.733	ENSCANG00000017807	ZFR	100	75.344	Colobus_angolensis_palliatus
ENSHCOG00000001548	zfr	100	75.663	ENSCGRG00001016009	Zfr	100	75.410	Cricetulus_griseus_chok1gshd
ENSHCOG00000001548	zfr	98	74.345	ENSCGRG00000001228	Zfr	98	74.390	Cricetulus_griseus_crigri
ENSHCOG00000001548	zfr	99	82.488	ENSCSEG00000011169	ZFR	99	83.226	Cynoglossus_semilaevis
ENSHCOG00000001548	zfr	96	81.974	ENSCSEG00000009224	zfr	86	79.977	Cynoglossus_semilaevis
ENSHCOG00000001548	zfr	98	81.758	ENSCVAG00000016494	zfr	100	81.380	Cyprinodon_variegatus
ENSHCOG00000001548	zfr	100	81.440	ENSDARG00000027109	zfr	100	82.087	Danio_rerio
ENSHCOG00000001548	zfr	100	76.051	ENSDNOG00000008852	ZFR	100	75.158	Dasypus_novemcinctus
ENSHCOG00000001548	zfr	100	75.045	ENSDORG00000016643	Zfr	100	75.160	Dipodomys_ordii
ENSHCOG00000001548	zfr	100	71.127	ENSETEG00000008937	ZFR	100	71.468	Echinops_telfairi
ENSHCOG00000001548	zfr	100	76.077	ENSEASG00005007104	ZFR	100	74.932	Equus_asinus_asinus
ENSHCOG00000001548	zfr	82	75.839	ENSECAG00000012851	ZFR	99	74.140	Equus_caballus
ENSHCOG00000001548	zfr	84	74.723	ENSEEUG00000014206	ZFR	82	78.330	Erinaceus_europaeus
ENSHCOG00000001548	zfr	99	71.468	ENSELUG00000022743	zfr	99	72.288	Esox_lucius
ENSHCOG00000001548	zfr	100	76.077	ENSFCAG00000000354	ZFR	100	75.344	Felis_catus
ENSHCOG00000001548	zfr	100	75.484	ENSFALG00000002149	ZFR	100	76.292	Ficedula_albicollis
ENSHCOG00000001548	zfr	99	75.348	ENSFDAG00000012993	ZFR	100	74.654	Fukomys_damarensis
ENSHCOG00000001548	zfr	59	75.552	ENSFHEG00000012064	zfr	96	78.807	Fundulus_heteroclitus
ENSHCOG00000001548	zfr	94	93.243	ENSGMOG00000003967	zfr	93	91.935	Gadus_morhua
ENSHCOG00000001548	zfr	100	77.461	ENSGALG00000003235	-	100	76.951	Gallus_gallus
ENSHCOG00000001548	zfr	100	77.072	ENSGALG00000034488	-	100	76.325	Gallus_gallus
ENSHCOG00000001548	zfr	99	66.728	ENSGAFG00000016229	zfr	100	66.265	Gambusia_affinis
ENSHCOG00000001548	zfr	99	80.530	ENSGACG00000005045	zfr	100	80.416	Gasterosteus_aculeatus
ENSHCOG00000001548	zfr	94	77.132	ENSGAGG00000013544	ZFR	99	76.528	Gopherus_agassizii
ENSHCOG00000001548	zfr	100	75.641	ENSGGOG00000016302	ZFR	100	75.252	Gorilla_gorilla
ENSHCOG00000001548	zfr	100	75.916	ENSHGLG00000008088	ZFR	100	75.549	Heterocephalus_glaber_female
ENSHCOG00000001548	zfr	96	75.621	ENSHGLG00100016776	ZFR	99	75.143	Heterocephalus_glaber_male
ENSHCOG00000001548	zfr	100	82.185	ENSIPUG00000008192	zfr	100	83.379	Ictalurus_punctatus
ENSHCOG00000001548	zfr	100	76.059	ENSSTOG00000008742	ZFR	100	75.414	Ictidomys_tridecemlineatus
ENSHCOG00000001548	zfr	99	70.935	ENSJJAG00000023064	Zfr	98	70.720	Jaculus_jaculus
ENSHCOG00000001548	zfr	91	85.324	ENSKMAG00000009468	zfr	99	86.957	Kryptolebias_marmoratus
ENSHCOG00000001548	zfr	100	83.196	ENSLBEG00000010783	zfr	100	82.461	Labrus_bergylta
ENSHCOG00000001548	zfr	100	72.263	ENSLACG00000000831	ZFR	100	73.564	Latimeria_chalumnae
ENSHCOG00000001548	zfr	99	79.279	ENSLOCG00000006727	zfr	99	80.631	Lepisosteus_oculatus
ENSHCOG00000001548	zfr	98	75.398	ENSLAFG00000002308	ZFR	100	74.164	Loxodonta_africana
ENSHCOG00000001548	zfr	100	74.817	ENSMFAG00000042691	ZFR	100	74.427	Macaca_fascicularis
ENSHCOG00000001548	zfr	100	75.733	ENSMMUG00000001317	ZFR	100	75.344	Macaca_mulatta
ENSHCOG00000001548	zfr	100	75.733	ENSMNEG00000029441	ZFR	100	81.375	Macaca_nemestrina
ENSHCOG00000001548	zfr	100	73.462	ENSMLEG00000028503	ZFR	100	74.905	Mandrillus_leucophaeus
ENSHCOG00000001548	zfr	100	85.438	ENSMAMG00000017351	zfr	100	84.793	Mastacembelus_armatus
ENSHCOG00000001548	zfr	93	89.560	ENSMZEG00005021243	zfr	84	81.594	Maylandia_zebra
ENSHCOG00000001548	zfr	96	65.105	ENSMGAG00000002841	ZFR	71	67.995	Meleagris_gallopavo
ENSHCOG00000001548	zfr	100	75.663	ENSMAUG00000000976	Zfr	100	74.773	Mesocricetus_auratus
ENSHCOG00000001548	zfr	100	75.916	ENSMICG00000001244	ZFR	100	75.458	Microcebus_murinus
ENSHCOG00000001548	zfr	100	75.389	ENSMOCG00000018630	Zfr	100	74.864	Microtus_ochrogaster
ENSHCOG00000001548	zfr	100	80.055	ENSMMOG00000012585	zfr	90	81.322	Mola_mola
ENSHCOG00000001548	zfr	100	76.627	ENSMODG00000020412	ZFR	100	76.400	Monodelphis_domestica
ENSHCOG00000001548	zfr	95	93.243	ENSMALG00000007123	zfr	94	98.387	Monopterus_albus
ENSHCOG00000001548	zfr	100	75.480	MGP_CAROLIEiJ_G0019681	Zfr	100	76.254	Mus_caroli
ENSHCOG00000001548	zfr	100	75.663	ENSMUSG00000022201	Zfr	100	82.051	Mus_musculus
ENSHCOG00000001548	zfr	100	75.480	MGP_PahariEiJ_G0016057	Zfr	100	76.254	Mus_pahari
ENSHCOG00000001548	zfr	100	75.641	MGP_SPRETEiJ_G0020574	Zfr	100	76.254	Mus_spretus
ENSHCOG00000001548	zfr	72	75.505	ENSMPUG00000015193	-	96	75.809	Mustela_putorius_furo
ENSHCOG00000001548	zfr	97	75.833	ENSMLUG00000011797	ZFR	99	75.358	Myotis_lucifugus
ENSHCOG00000001548	zfr	100	76.099	ENSNGAG00000018328	Zfr	100	75.549	Nannospalax_galili
ENSHCOG00000001548	zfr	93	89.560	ENSNBRG00000008378	zfr	84	78.454	Neolamprologus_brichardi
ENSHCOG00000001548	zfr	100	73.162	ENSNLEG00000014098	ZFR	100	74.809	Nomascus_leucogenys
ENSHCOG00000001548	zfr	96	70.841	ENSMEUG00000010225	ZFR	100	70.718	Notamacropus_eugenii
ENSHCOG00000001548	zfr	83	77.778	ENSOPRG00000016756	ZFR	84	77.778	Ochotona_princeps
ENSHCOG00000001548	zfr	96	75.119	ENSODEG00000001990	ZFR	100	75.143	Octodon_degus
ENSHCOG00000001548	zfr	96	76.313	ENSOANG00000014434	ZFR	99	76.409	Ornithorhynchus_anatinus
ENSHCOG00000001548	zfr	100	76.099	ENSOCUG00000016737	ZFR	100	75.549	Oryctolagus_cuniculus
ENSHCOG00000001548	zfr	99	82.472	ENSORLG00000017243	zfr	99	82.212	Oryzias_latipes
ENSHCOG00000001548	zfr	99	82.472	ENSORLG00020014823	zfr	99	82.212	Oryzias_latipes_hni
ENSHCOG00000001548	zfr	99	82.472	ENSORLG00015005801	zfr	99	82.212	Oryzias_latipes_hsok
ENSHCOG00000001548	zfr	99	84.317	ENSOMEG00000003336	zfr	99	83.594	Oryzias_melastigma
ENSHCOG00000001548	zfr	100	73.742	ENSOGAG00000015117	ZFR	100	73.285	Otolemur_garnettii
ENSHCOG00000001548	zfr	97	74.714	ENSOARG00000012233	ZFR	100	73.282	Ovis_aries
ENSHCOG00000001548	zfr	97	74.811	ENSPPAG00000027447	ZFR	99	74.690	Pan_paniscus
ENSHCOG00000001548	zfr	100	76.077	ENSPPRG00000008253	ZFR	100	75.344	Panthera_pardus
ENSHCOG00000001548	zfr	100	73.602	ENSPTIG00000010038	ZFR	99	73.155	Panthera_tigris_altaica
ENSHCOG00000001548	zfr	100	75.733	ENSPTRG00000016771	ZFR	100	75.344	Pan_troglodytes
ENSHCOG00000001548	zfr	100	74.586	ENSPANG00000003729	ZFR	100	74.101	Papio_anubis
ENSHCOG00000001548	zfr	94	88.525	ENSPKIG00000016781	ZFR	99	81.308	Paramormyrops_kingsleyae
ENSHCOG00000001548	zfr	99	72.727	ENSPKIG00000007596	ZFR	100	73.626	Paramormyrops_kingsleyae
ENSHCOG00000001548	zfr	51	78.919	ENSPSIG00000005779	ZFR	98	79.603	Pelodiscus_sinensis
ENSHCOG00000001548	zfr	96	82.101	ENSPMGG00000015984	zfr	100	75.093	Periophthalmus_magnuspinnatus
ENSHCOG00000001548	zfr	96	75.191	ENSPEMG00000014573	Zfr	98	74.551	Peromyscus_maniculatus_bairdii
ENSHCOG00000001548	zfr	100	76.535	ENSPCIG00000020906	ZFR	100	81.662	Phascolarctos_cinereus
ENSHCOG00000001548	zfr	99	83.457	ENSPFOG00000005931	zfr	100	82.717	Poecilia_formosa
ENSHCOG00000001548	zfr	99	83.874	ENSPREG00000011947	zfr	100	83.781	Poecilia_reticulata
ENSHCOG00000001548	zfr	97	75.024	ENSPPYG00000015378	ZFR	99	74.523	Pongo_abelii
ENSHCOG00000001548	zfr	100	68.407	ENSPCAG00000007277	ZFR	100	68.590	Procavia_capensis
ENSHCOG00000001548	zfr	95	76.255	ENSPCOG00000000045	ZFR	99	75.772	Propithecus_coquereli
ENSHCOG00000001548	zfr	94	75.000	ENSPVAG00000004780	ZFR	94	75.000	Pteropus_vampyrus
ENSHCOG00000001548	zfr	93	89.560	ENSPNYG00000006239	zfr	84	81.477	Pundamilia_nyererei
ENSHCOG00000001548	zfr	93	90.710	ENSPNAG00000025151	zfr	100	83.041	Pygocentrus_nattereri
ENSHCOG00000001548	zfr	100	75.755	ENSRNOG00000011627	Zfr	100	75.641	Rattus_norvegicus
ENSHCOG00000001548	zfr	100	75.641	ENSRBIG00000041561	ZFR	100	75.252	Rhinopithecus_bieti
ENSHCOG00000001548	zfr	100	75.641	ENSRROG00000044008	ZFR	100	75.252	Rhinopithecus_roxellana
ENSHCOG00000001548	zfr	96	75.335	ENSSBOG00000024150	ZFR	99	74.432	Saimiri_boliviensis_boliviensis
ENSHCOG00000001548	zfr	96	76.313	ENSSHAG00000015478	ZFR	100	75.981	Sarcophilus_harrisii
ENSHCOG00000001548	zfr	99	74.931	ENSSFOG00015017300	ZFR	99	74.977	Scleropages_formosus
ENSHCOG00000001548	zfr	100	84.890	ENSSMAG00000000320	zfr	100	85.440	Scophthalmus_maximus
ENSHCOG00000001548	zfr	100	86.175	ENSSDUG00000013882	zfr	100	85.438	Seriola_dumerili
ENSHCOG00000001548	zfr	93	84.856	ENSSLDG00000000762	zfr	100	78.433	Seriola_lalandi_dorsalis
ENSHCOG00000001548	zfr	89	78.667	ENSSARG00000006571	ZFR	91	78.667	Sorex_araneus
ENSHCOG00000001548	zfr	96	76.600	ENSSPUG00000016786	ZFR	100	76.168	Sphenodon_punctatus
ENSHCOG00000001548	zfr	100	86.188	ENSSPAG00000019293	zfr	100	86.740	Stegastes_partitus
ENSHCOG00000001548	zfr	100	75.894	ENSSSCG00000027681	ZFR	100	75.344	Sus_scrofa
ENSHCOG00000001548	zfr	99	75.619	ENSTGUG00000001909	ZFR	100	75.716	Taeniopygia_guttata
ENSHCOG00000001548	zfr	100	83.441	ENSTRUG00000016620	zfr	100	83.901	Takifugu_rubripes
ENSHCOG00000001548	zfr	56	75.941	ENSTNIG00000018856	zfr	100	75.450	Tetraodon_nigroviridis
ENSHCOG00000001548	zfr	94	68.259	ENSTBEG00000017687	ZFR	100	58.749	Tupaia_belangeri
ENSHCOG00000001548	zfr	100	71.677	ENSTTRG00000017321	ZFR	100	71.036	Tursiops_truncatus
ENSHCOG00000001548	zfr	78	75.323	ENSUAMG00000000172	-	99	74.118	Ursus_americanus
ENSHCOG00000001548	zfr	78	75.323	ENSUMAG00000013805	-	99	74.118	Ursus_maritimus
ENSHCOG00000001548	zfr	100	73.877	ENSVPAG00000011011	ZFR	100	73.052	Vicugna_pacos
ENSHCOG00000001548	zfr	100	76.077	ENSVVUG00000022171	-	100	75.344	Vulpes_vulpes
ENSHCOG00000001548	zfr	100	70.914	ENSXETG00000015598	zfr	100	71.140	Xenopus_tropicalis
ENSHCOG00000001548	zfr	99	83.272	ENSXCOG00000009361	zfr	100	82.163	Xiphophorus_couchianus
ENSHCOG00000001548	zfr	99	83.272	ENSXMAG00000013356	zfr	100	82.163	Xiphophorus_maculatus