EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001581 (Gene tree)
Gene ID: 109521706
Gene Symbol: -
Alias: -
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 17280 bases
Position: chrKV880113.1:3713275-3730554
Accession: 109521706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000724	Gar1	PF04410.14	7.7e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013310	-	1533	XM_019879719	ENSHCOP00000000724	381 (aa)	XP_019735278	UPI00094E0518

Gene Model

Click here to download ENSHCOG00000001581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001581	-	75	54.266	ENSAPOG00000007663	-	71	55.137	Acanthochromis_polyacanthus
ENSHCOG00000001581	-	74	57.045	ENSAOCG00000003518	-	72	56.446	Amphiprion_ocellaris
ENSHCOG00000001581	-	72	58.246	ENSAPEG00000004453	-	71	58.537	Amphiprion_percula
ENSHCOG00000001581	-	50	54.167	ENSANAG00000025253	NAF1	93	57.500	Aotus_nancymaae
ENSHCOG00000001581	-	71	54.035	ENSACLG00000017092	-	68	54.804	Astatotilapia_calliptera
ENSHCOG00000001581	-	62	45.267	ENSBTAG00000034700	NAF1	50	54.444	Bos_taurus
ENSHCOG00000001581	-	54	51.429	ENSCJAG00000012406	NAF1	95	57.500	Callithrix_jacchus
ENSHCOG00000001581	-	76	41.250	ENSTSYG00000005946	NAF1	84	58.333	Carlito_syrichta
ENSHCOG00000001581	-	50	54.167	ENSCCAG00000030023	NAF1	95	57.500	Cebus_capucinus
ENSHCOG00000001581	-	78	58.511	ENSCGRG00000001742	Naf1	55	58.031	Cricetulus_griseus_crigri
ENSHCOG00000001581	-	64	48.000	ENSJJAG00000012147	-	64	48.333	Jaculus_jaculus
ENSHCOG00000001581	-	71	55.319	ENSKMAG00000005434	-	59	55.517	Kryptolebias_marmoratus
ENSHCOG00000001581	-	57	62.832	ENSLBEG00000020414	-	53	62.832	Labrus_bergylta
ENSHCOG00000001581	-	73	55.973	ENSMAMG00000003269	-	82	65.041	Mastacembelus_armatus
ENSHCOG00000001581	-	71	55.036	ENSMZEG00005005830	-	70	55.914	Maylandia_zebra
ENSHCOG00000001581	-	67	42.908	ENSMGAG00000002133	NAF1	51	59.259	Meleagris_gallopavo
ENSHCOG00000001581	-	73	57.383	ENSMALG00000018482	-	81	53.708	Monopterus_albus
ENSHCOG00000001581	-	72	53.016	ENSORLG00000002191	-	58	51.553	Oryzias_latipes
ENSHCOG00000001581	-	72	52.698	ENSORLG00020013478	-	58	52.174	Oryzias_latipes_hni
ENSHCOG00000001581	-	72	52.548	ENSORLG00015012985	-	58	51.242	Oryzias_latipes_hsok
ENSHCOG00000001581	-	57	60.870	ENSOMEG00000021322	-	61	52.258	Oryzias_melastigma
ENSHCOG00000001581	-	71	53.061	ENSPFOG00000010705	-	68	57.255	Poecilia_formosa
ENSHCOG00000001581	-	72	54.639	ENSPREG00000022551	-	59	57.491	Poecilia_reticulata
ENSHCOG00000001581	-	71	45.000	ENSPNYG00000021456	-	68	46.290	Pundamilia_nyererei
ENSHCOG00000001581	-	66	45.038	ENSPNAG00000001219	naf1	56	49.296	Pygocentrus_nattereri
ENSHCOG00000001581	-	54	51.429	ENSSBOG00000002085	NAF1	95	57.500	Saimiri_boliviensis_boliviensis
ENSHCOG00000001581	-	56	60.515	ENSSMAG00000015529	-	73	56.000	Scophthalmus_maximus
ENSHCOG00000001581	-	62	62.903	ENSSDUG00000005987	-	71	58.416	Seriola_dumerili
ENSHCOG00000001581	-	60	57.255	ENSSLDG00000019761	-	66	55.049	Seriola_lalandi_dorsalis
ENSHCOG00000001581	-	68	43.636	ENSSSCG00000008887	NAF1	71	39.024	Sus_scrofa
ENSHCOG00000001581	-	73	57.343	ENSTRUG00000011908	-	79	57.045	Takifugu_rubripes
ENSHCOG00000001581	-	64	53.061	ENSXCOG00000013058	-	72	52.500	Xiphophorus_couchianus