EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000001629 (Gene tree)
Gene ID: 109525103
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF8.2DB-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2265 bases
Position: chrKV880234.1:140590-142854
Accession: 109525103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000762	zf-C2H2	PF00096.26	7.1e-45	1	8
ENSHCOP00000000762	zf-C2H2	PF00096.26	7.1e-45	2	8
ENSHCOP00000000762	zf-C2H2	PF00096.26	7.1e-45	3	8
ENSHCOP00000000762	zf-C2H2	PF00096.26	7.1e-45	4	8
ENSHCOP00000000762	zf-C2H2	PF00096.26	7.1e-45	5	8
ENSHCOP00000000762	zf-C2H2	PF00096.26	7.1e-45	6	8
ENSHCOP00000000762	zf-C2H2	PF00096.26	7.1e-45	7	8
ENSHCOP00000000762	zf-C2H2	PF00096.26	7.1e-45	8	8
ENSHCOP00000000762	zf-met	PF12874.7	2.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013234	-	1698	XM_019885382	ENSHCOP00000000762	416 (aa)	XP_019740941	UPI00094E9D00

Gene Model

Click here to download ENSHCOG00000001629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001629's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000001629	-	90	52.889	ENSHCOG00000020940	-	98	52.889
ENSHCOG00000001629	-	72	49.245	ENSHCOG00000012175	-	97	51.969
ENSHCOG00000001629	-	62	47.917	ENSHCOG00000003041	-	92	44.882
ENSHCOG00000001629	-	63	34.815	ENSHCOG00000019435	SNAI2	55	38.462
ENSHCOG00000001629	-	75	49.615	ENSHCOG00000019438	-	82	49.615
ENSHCOG00000001629	-	64	48.469	ENSHCOG00000019001	-	90	48.469
ENSHCOG00000001629	-	99	55.000	ENSHCOG00000021033	-	99	55.426
ENSHCOG00000001629	-	62	40.698	ENSHCOG00000015246	-	60	42.857
ENSHCOG00000001629	-	77	35.439	ENSHCOG00000015241	-	67	39.572
ENSHCOG00000001629	-	71	44.565	ENSHCOG00000001345	-	90	44.565
ENSHCOG00000001629	-	88	41.304	ENSHCOG00000008205	-	68	54.444
ENSHCOG00000001629	-	100	54.028	ENSHCOG00000001631	-	100	54.976
ENSHCOG00000001629	-	97	57.143	ENSHCOG00000001638	-	99	57.143
ENSHCOG00000001629	-	67	59.302	ENSHCOG00000015476	-	88	59.302
ENSHCOG00000001629	-	63	47.826	ENSHCOG00000019555	GFI1	53	49.231
ENSHCOG00000001629	-	99	44.578	ENSHCOG00000019454	-	99	44.578
ENSHCOG00000001629	-	99	45.055	ENSHCOG00000019458	-	92	45.055
ENSHCOG00000001629	-	63	40.000	ENSHCOG00000001901	si:dkey-89b17.4	98	40.000
ENSHCOG00000001629	-	70	46.602	ENSHCOG00000014777	-	97	46.602
ENSHCOG00000001629	-	67	53.275	ENSHCOG00000017456	-	95	53.814
ENSHCOG00000001629	-	87	56.716	ENSHCOG00000009009	-	100	56.716
ENSHCOG00000001629	-	65	34.457	ENSHCOG00000000800	-	78	34.981
ENSHCOG00000001629	-	85	49.398	ENSHCOG00000014999	-	73	49.398
ENSHCOG00000001629	-	92	43.687	ENSHCOG00000015414	-	97	43.434
ENSHCOG00000001629	-	99	50.862	ENSHCOG00000020976	-	92	50.862
ENSHCOG00000001629	-	68	55.805	ENSHCOG00000020972	-	94	56.809
ENSHCOG00000001629	-	90	47.126	ENSHCOG00000007664	-	96	56.731
ENSHCOG00000001629	-	60	36.296	ENSHCOG00000008116	scrt2	52	36.296
ENSHCOG00000001629	-	90	47.464	ENSHCOG00000001942	-	93	51.101
ENSHCOG00000001629	-	63	33.971	ENSHCOG00000017644	patz1	50	33.971
ENSHCOG00000001629	-	67	51.154	ENSHCOG00000021028	-	97	52.000
ENSHCOG00000001629	-	99	43.478	ENSHCOG00000008213	-	87	43.478
ENSHCOG00000001629	-	67	35.909	ENSHCOG00000015639	znf319b	96	35.849
ENSHCOG00000001629	-	88	44.828	ENSHCOG00000014855	-	91	44.828
ENSHCOG00000001629	-	88	47.423	ENSHCOG00000014850	-	95	47.423
ENSHCOG00000001629	-	99	55.426	ENSHCOG00000015441	-	95	55.426
ENSHCOG00000001629	-	87	50.345	ENSHCOG00000017437	-	91	50.345
ENSHCOG00000001629	-	93	54.150	ENSHCOG00000012617	-	98	57.080
ENSHCOG00000001629	-	88	49.425	ENSHCOG00000020909	-	96	41.282
ENSHCOG00000001629	-	94	57.143	ENSHCOG00000015355	-	94	61.468
ENSHCOG00000001629	-	90	43.463	ENSHCOG00000000517	-	92	46.000
ENSHCOG00000001629	-	99	46.640	ENSHCOG00000021073	-	99	46.640
ENSHCOG00000001629	-	96	50.000	ENSHCOG00000007485	-	94	52.419
ENSHCOG00000001629	-	99	45.495	ENSHCOG00000000138	-	90	43.956
ENSHCOG00000001629	-	99	52.439	ENSHCOG00000001423	-	98	52.439
ENSHCOG00000001629	-	88	48.438	ENSHCOG00000009103	-	68	47.826
ENSHCOG00000001629	-	63	41.346	ENSHCOG00000003407	snai1a	56	40.000
ENSHCOG00000001629	-	70	46.392	ENSHCOG00000001300	-	96	48.454
ENSHCOG00000001629	-	99	46.620	ENSHCOG00000001308	-	90	46.620
ENSHCOG00000001629	-	62	35.714	ENSHCOG00000016704	scrt1b	53	35.714
ENSHCOG00000001629	-	60	33.636	ENSHCOG00000016337	si:ch211-216l23.1	67	33.636
ENSHCOG00000001629	-	70	53.898	ENSHCOG00000012662	-	96	54.362
ENSHCOG00000001629	-	94	53.101	ENSHCOG00000007990	-	91	53.101
ENSHCOG00000001629	-	89	54.211	ENSHCOG00000011433	-	97	54.211
ENSHCOG00000001629	-	92	46.087	ENSHCOG00000011432	-	97	46.465
ENSHCOG00000001629	-	90	48.617	ENSHCOG00000001272	-	96	49.057
ENSHCOG00000001629	-	84	49.444	ENSHCOG00000015105	-	97	49.444
ENSHCOG00000001629	-	85	36.149	ENSHCOG00000015237	-	66	35.906
ENSHCOG00000001629	-	69	36.957	ENSHCOG00000002898	-	53	35.135
ENSHCOG00000001629	-	97	48.289	ENSHCOG00000013455	-	99	49.225
ENSHCOG00000001629	-	70	53.448	ENSHCOG00000008906	-	87	53.448
ENSHCOG00000001629	-	69	44.706	ENSHCOG00000010282	znf236	64	44.860
ENSHCOG00000001629	-	62	59.677	ENSHCOG00000003021	-	50	59.677
ENSHCOG00000001629	-	63	35.714	ENSHCOG00000011612	zfat	55	35.714
ENSHCOG00000001629	-	89	45.128	ENSHCOG00000018977	-	83	40.678
ENSHCOG00000001629	-	99	45.972	ENSHCOG00000020879	-	99	45.972
ENSHCOG00000001629	-	82	53.145	ENSHCOG00000001793	-	98	52.000
ENSHCOG00000001629	-	88	47.414	ENSHCOG00000001245	-	89	47.414
ENSHCOG00000001629	-	83	56.585	ENSHCOG00000003909	-	72	56.585
ENSHCOG00000001629	-	99	53.333	ENSHCOG00000015484	-	100	53.205
ENSHCOG00000001629	-	65	49.485	ENSHCOG00000001292	-	64	49.485
ENSHCOG00000001629	-	88	44.937	ENSHCOG00000014874	-	93	44.937
ENSHCOG00000001629	-	85	46.465	ENSHCOG00000001318	-	93	46.774
ENSHCOG00000001629	-	88	50.211	ENSHCOG00000003085	-	91	50.644
ENSHCOG00000001629	-	62	50.000	ENSHCOG00000020670	-	74	50.000
ENSHCOG00000001629	-	91	46.847	ENSHCOG00000015003	-	90	46.847
ENSHCOG00000001629	-	99	37.856	ENSHCOG00000015000	-	94	49.603
ENSHCOG00000001629	-	78	54.348	ENSHCOG00000015005	-	80	54.348
ENSHCOG00000001629	-	99	50.450	ENSHCOG00000012592	-	97	50.450
ENSHCOG00000001629	-	67	45.320	ENSHCOG00000014786	-	96	45.320
ENSHCOG00000001629	-	97	48.905	ENSHCOG00000014781	-	99	48.905
ENSHCOG00000001629	-	99	45.752	ENSHCOG00000001870	-	91	45.752
ENSHCOG00000001629	-	63	45.161	ENSHCOG00000013713	gfi1b	52	41.593
ENSHCOG00000001629	-	94	49.140	ENSHCOG00000020993	-	90	48.259
ENSHCOG00000001629	-	88	50.000	ENSHCOG00000014713	-	98	50.988
ENSHCOG00000001629	-	75	50.479	ENSHCOG00000019465	-	95	49.235
ENSHCOG00000001629	-	63	39.888	ENSHCOG00000018201	-	81	39.888
ENSHCOG00000001629	-	70	48.305	ENSHCOG00000007681	-	89	48.305
ENSHCOG00000001629	-	63	46.245	ENSHCOG00000001238	-	89	46.245
ENSHCOG00000001629	-	99	51.163	ENSHCOG00000020848	-	98	51.163
ENSHCOG00000001629	-	93	50.862	ENSHCOG00000020846	-	95	50.862
ENSHCOG00000001629	-	71	58.015	ENSHCOG00000015425	-	91	55.455
ENSHCOG00000001629	-	69	52.632	ENSHCOG00000015386	-	89	53.333
ENSHCOG00000001629	-	99	51.235	ENSHCOG00000020924	-	99	51.235
ENSHCOG00000001629	-	87	47.826	ENSHCOG00000013489	-	99	47.826
ENSHCOG00000001629	-	63	30.047	ENSHCOG00000014890	znf646	99	30.047
ENSHCOG00000001629	-	63	38.835	ENSHCOG00000012131	prdm5	74	38.911
ENSHCOG00000001629	-	100	49.265	ENSHCOG00000000947	-	94	49.265
ENSHCOG00000001629	-	72	57.971	ENSHCOG00000015497	-	79	57.971
ENSHCOG00000001629	-	67	42.857	ENSHCOG00000007464	-	74	42.857
ENSHCOG00000001629	-	99	57.627	ENSHCOG00000001448	-	94	56.667
ENSHCOG00000001629	-	91	51.986	ENSHCOG00000002969	-	75	51.264
ENSHCOG00000001629	-	67	49.383	ENSHCOG00000008601	-	90	49.383
ENSHCOG00000001629	-	90	52.419	ENSHCOG00000008168	-	97	52.419
ENSHCOG00000001629	-	90	52.326	ENSHCOG00000015459	-	83	52.326
ENSHCOG00000001629	-	99	36.500	ENSHCOG00000008227	-	87	33.333
ENSHCOG00000001629	-	80	45.133	ENSHCOG00000007351	-	96	42.667
ENSHCOG00000001629	-	65	48.858	ENSHCOG00000007358	-	72	48.858
ENSHCOG00000001629	-	88	52.525	ENSHCOG00000011411	-	97	53.282
ENSHCOG00000001629	-	92	47.159	ENSHCOG00000001256	-	91	47.159
ENSHCOG00000001629	-	67	47.514	ENSHCOG00000001252	-	99	47.514
ENSHCOG00000001629	-	99	45.161	ENSHCOG00000019389	-	82	45.161
ENSHCOG00000001629	-	94	48.387	ENSHCOG00000019388	-	76	46.667
ENSHCOG00000001629	-	86	50.420	ENSHCOG00000019385	-	93	50.420
ENSHCOG00000001629	-	63	33.803	ENSHCOG00000020556	-	55	33.803
ENSHCOG00000001629	-	62	39.535	ENSHCOG00000000511	-	75	37.838
ENSHCOG00000001629	-	97	37.678	ENSHCOG00000015010	-	97	37.412
ENSHCOG00000001629	-	88	54.962	ENSHCOG00000019481	-	90	51.795
ENSHCOG00000001629	-	99	48.421	ENSHCOG00000014797	-	92	48.421
ENSHCOG00000001629	-	91	42.132	ENSHCOG00000014796	-	66	45.455
ENSHCOG00000001629	-	99	45.806	ENSHCOG00000014792	-	98	45.806
ENSHCOG00000001629	-	85	50.000	ENSHCOG00000020984	-	99	50.628
ENSHCOG00000001629	-	91	48.235	ENSHCOG00000001873	-	99	50.000
ENSHCOG00000001629	-	99	50.198	ENSHCOG00000020725	-	98	56.202
ENSHCOG00000001629	-	91	48.235	ENSHCOG00000008550	-	99	50.000
ENSHCOG00000001629	-	70	45.685	ENSHCOG00000008742	-	75	45.685
ENSHCOG00000001629	-	84	52.308	ENSHCOG00000020856	-	89	52.308
ENSHCOG00000001629	-	67	37.126	ENSHCOG00000010332	-	59	43.860
ENSHCOG00000001629	-	71	48.387	ENSHCOG00000001883	-	89	49.834
ENSHCOG00000001629	-	91	36.272	ENSHCOG00000008133	-	92	41.053
ENSHCOG00000001629	-	99	43.548	ENSHCOG00000014881	-	92	43.648
ENSHCOG00000001629	-	99	38.462	ENSHCOG00000014887	-	82	31.481
ENSHCOG00000001629	-	70	40.580	ENSHCOG00000015231	-	62	43.478
ENSHCOG00000001629	-	99	37.363	ENSHCOG00000008181	-	96	38.596
ENSHCOG00000001629	-	84	52.465	ENSHCOG00000019512	-	91	55.814
ENSHCOG00000001629	-	90	50.000	ENSHCOG00000001338	-	89	49.321
ENSHCOG00000001629	-	98	41.077	ENSHCOG00000008234	-	94	42.105
ENSHCOG00000001629	-	99	51.176	ENSHCOG00000015463	-	99	51.176
ENSHCOG00000001629	-	98	42.667	ENSHCOG00000001242	-	93	38.278
ENSHCOG00000001629	-	69	55.212	ENSHCOG00000008028	-	84	56.190
ENSHCOG00000001629	-	90	50.394	ENSHCOG00000019497	-	93	52.326
ENSHCOG00000001629	-	99	42.742	ENSHCOG00000019541	-	97	42.742
ENSHCOG00000001629	-	76	37.548	ENSHCOG00000006286	ZNF319	86	37.548
ENSHCOG00000001629	-	99	54.268	ENSHCOG00000000627	-	98	49.296
ENSHCOG00000001629	-	61	44.262	ENSHCOG00000008686	-	84	44.262
ENSHCOG00000001629	-	63	50.000	ENSHCOG00000014986	-	82	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001629	-	63	51.765	ENSACAG00000026906	-	99	52.381	Anolis_carolinensis
ENSHCOG00000001629	-	64	45.736	ENSACAG00000026916	-	81	45.736	Anolis_carolinensis
ENSHCOG00000001629	-	64	52.018	ENSACAG00000027001	-	97	52.018	Anolis_carolinensis
ENSHCOG00000001629	-	62	46.835	ENSAMXG00000038122	-	95	46.835	Astyanax_mexicanus
ENSHCOG00000001629	-	64	42.512	ENSAMXG00000014745	-	82	42.512	Astyanax_mexicanus
ENSHCOG00000001629	-	63	44.015	ENSELUG00000021525	-	91	46.320	Esox_lucius
ENSHCOG00000001629	-	67	46.237	ENSELUG00000000485	-	89	48.062	Esox_lucius
ENSHCOG00000001629	-	67	42.342	ENSELUG00000018970	-	81	42.023	Esox_lucius
ENSHCOG00000001629	-	69	40.310	ENSELUG00000013806	-	63	40.310	Esox_lucius
ENSHCOG00000001629	-	63	43.429	ENSELUG00000011838	-	65	43.429	Esox_lucius
ENSHCOG00000001629	-	63	43.191	ENSGACG00000001523	-	99	43.191	Gasterosteus_aculeatus
ENSHCOG00000001629	-	64	43.460	ENSHBUG00000016384	-	91	43.830	Haplochromis_burtoni
ENSHCOG00000001629	-	87	40.625	ENSLBEG00000013235	-	80	40.625	Labrus_bergylta
ENSHCOG00000001629	-	64	43.363	ENSMGAG00000016603	-	100	43.363	Meleagris_gallopavo
ENSHCOG00000001629	-	64	48.302	ENSPNAG00000009176	-	94	49.421	Pygocentrus_nattereri
ENSHCOG00000001629	-	64	46.104	ENSPNAG00000009184	-	83	44.574	Pygocentrus_nattereri
ENSHCOG00000001629	-	64	42.857	ENSSFOG00015020993	-	92	42.857	Scleropages_formosus
ENSHCOG00000001629	-	63	38.996	ENSTNIG00000000528	-	96	38.996	Tetraodon_nigroviridis
ENSHCOG00000001629	-	64	44.061	ENSTNIG00000002343	-	85	44.186	Tetraodon_nigroviridis
ENSHCOG00000001629	-	92	46.781	ENSXMAG00000020042	-	96	46.781	Xiphophorus_maculatus