EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000001685 (Gene tree)
Gene ID: 109525097
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6604 bases
Position: chrKV880234.1:93792-100395
Accession: 109525097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000806	ResIII	PF04851.15	9.3e-07	1	1
ENSHCOP00000017700	ResIII	PF04851.15	9.5e-07	1	1
ENSHCOP00000000806	DEAD	PF00270.29	3e-40	1	1
ENSHCOP00000017700	DEAD	PF00270.29	3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013163	-	1635	-	ENSHCOP00000017700	544 (aa)	-	-
ENSHCOT00000013155	-	3378	XM_019885372	ENSHCOP00000000806	552 (aa)	XP_019740931	UPI00094F1376

Gene Model

Click here to download ENSHCOG00000001685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000001685	ddx56	71	30.402	ENSHCOG00000007966	ddx52	65	30.402
ENSHCOG00000001685	ddx56	72	32.576	ENSHCOG00000005496	ddx47	74	32.576
ENSHCOG00000001685	ddx56	75	30.193	ENSHCOG00000008961	ddx49	79	30.193
ENSHCOG00000001685	ddx56	69	30.435	ENSHCOG00000018337	ddx4	60	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001685	ddx56	97	64.325	ENSG00000136271	DDX56	98	68.132	Homo_sapiens
ENSHCOG00000001685	ddx56	100	82.416	ENSAPOG00000017113	ddx56	100	83.126	Acanthochromis_polyacanthus
ENSHCOG00000001685	ddx56	98	63.119	ENSAMEG00000017711	DDX56	98	63.853	Ailuropoda_melanoleuca
ENSHCOG00000001685	ddx56	96	71.161	ENSACIG00000013747	ddx56	100	85.326	Amphilophus_citrinellus
ENSHCOG00000001685	ddx56	89	86.800	ENSAOCG00000018059	ddx56	94	87.600	Amphiprion_ocellaris
ENSHCOG00000001685	ddx56	87	86.858	ENSAOCG00000015447	-	87	87.680	Amphiprion_ocellaris
ENSHCOG00000001685	ddx56	99	83.784	ENSAPEG00000007267	ddx56	99	83.784	Amphiprion_percula
ENSHCOG00000001685	ddx56	99	81.115	ENSATEG00000005279	ddx56	99	82.014	Anabas_testudineus
ENSHCOG00000001685	ddx56	100	79.715	ENSACLG00000020113	ddx56	100	80.249	Astatotilapia_calliptera
ENSHCOG00000001685	ddx56	99	72.193	ENSAMXG00000019357	ddx56	99	72.695	Astyanax_mexicanus
ENSHCOG00000001685	ddx56	97	64.825	ENSBTAG00000010602	DDX56	97	65.193	Bos_taurus
ENSHCOG00000001685	ddx56	97	39.170	WBGene00016073	C24H12.4	86	39.170	Caenorhabditis_elegans
ENSHCOG00000001685	ddx56	97	64.140	ENSCJAG00000012233	DDX56	97	64.140	Callithrix_jacchus
ENSHCOG00000001685	ddx56	81	60.356	ENSCAFG00000029295	DDX56	98	61.470	Canis_familiaris
ENSHCOG00000001685	ddx56	98	62.018	ENSCAFG00020019695	DDX56	98	62.202	Canis_lupus_dingo
ENSHCOG00000001685	ddx56	98	64.416	ENSCHIG00000014261	DDX56	98	64.416	Capra_hircus
ENSHCOG00000001685	ddx56	97	63.704	ENSTSYG00000008048	DDX56	97	64.074	Carlito_syrichta
ENSHCOG00000001685	ddx56	84	64.668	ENSCAPG00000006286	DDX56	97	64.668	Cavia_aperea
ENSHCOG00000001685	ddx56	97	66.111	ENSCPOG00000003359	DDX56	97	66.111	Cavia_porcellus
ENSHCOG00000001685	ddx56	97	63.401	ENSCCAG00000025303	DDX56	97	63.771	Cebus_capucinus
ENSHCOG00000001685	ddx56	97	63.771	ENSCATG00000039389	DDX56	97	63.771	Cercocebus_atys
ENSHCOG00000001685	ddx56	98	64.220	ENSCLAG00000007666	DDX56	98	64.220	Chinchilla_lanigera
ENSHCOG00000001685	ddx56	97	63.956	ENSCSAG00000015636	DDX56	97	63.956	Chlorocebus_sabaeus
ENSHCOG00000001685	ddx56	97	69.061	ENSCPBG00000024556	DDX56	97	69.061	Chrysemys_picta_bellii
ENSHCOG00000001685	ddx56	90	60.433	ENSCING00000005185	-	98	60.827	Ciona_intestinalis
ENSHCOG00000001685	ddx56	89	58.918	ENSCSAVG00000011266	-	99	59.600	Ciona_savignyi
ENSHCOG00000001685	ddx56	97	63.956	ENSCANG00000028187	DDX56	97	63.956	Colobus_angolensis_palliatus
ENSHCOG00000001685	ddx56	97	64.630	ENSCGRG00001019019	Ddx56	97	64.630	Cricetulus_griseus_chok1gshd
ENSHCOG00000001685	ddx56	97	64.630	ENSCGRG00000011870	Ddx56	97	64.630	Cricetulus_griseus_crigri
ENSHCOG00000001685	ddx56	100	78.292	ENSCSEG00000008368	ddx56	100	78.292	Cynoglossus_semilaevis
ENSHCOG00000001685	ddx56	99	81.261	ENSCVAG00000006499	ddx56	99	81.261	Cyprinodon_variegatus
ENSHCOG00000001685	ddx56	99	75.090	ENSDARG00000020913	ddx56	99	75.090	Danio_rerio
ENSHCOG00000001685	ddx56	84	62.099	ENSDNOG00000036526	DDX56	96	62.099	Dasypus_novemcinctus
ENSHCOG00000001685	ddx56	91	52.871	FBgn0001565	Hlc	89	52.871	Drosophila_melanogaster
ENSHCOG00000001685	ddx56	86	44.304	ENSETEG00000019559	-	99	44.304	Echinops_telfairi
ENSHCOG00000001685	ddx56	63	75.000	ENSETEG00000002969	-	64	75.000	Echinops_telfairi
ENSHCOG00000001685	ddx56	98	63.653	ENSEBUG00000009986	ddx56	99	64.195	Eptatretus_burgeri
ENSHCOG00000001685	ddx56	98	62.936	ENSEASG00005017795	DDX56	98	63.670	Equus_asinus_asinus
ENSHCOG00000001685	ddx56	98	62.752	ENSECAG00000019897	DDX56	98	63.486	Equus_caballus
ENSHCOG00000001685	ddx56	86	61.555	ENSEEUG00000004849	DDX56	99	61.555	Erinaceus_europaeus
ENSHCOG00000001685	ddx56	98	80.439	ENSELUG00000004150	ddx56	98	80.292	Esox_lucius
ENSHCOG00000001685	ddx56	98	62.936	ENSFCAG00000010261	DDX56	98	63.670	Felis_catus
ENSHCOG00000001685	ddx56	97	64.391	ENSFDAG00000007128	DDX56	97	64.576	Fukomys_damarensis
ENSHCOG00000001685	ddx56	100	77.518	ENSFHEG00000018008	ddx56	96	84.909	Fundulus_heteroclitus
ENSHCOG00000001685	ddx56	95	77.567	ENSGAFG00000006906	ddx56	99	78.053	Gambusia_affinis
ENSHCOG00000001685	ddx56	92	70.565	ENSGAGG00000006789	DDX56	91	70.565	Gopherus_agassizii
ENSHCOG00000001685	ddx56	97	64.325	ENSGGOG00000012031	DDX56	97	64.325	Gorilla_gorilla
ENSHCOG00000001685	ddx56	96	75.888	ENSHBUG00000015246	ddx56	96	76.449	Haplochromis_burtoni
ENSHCOG00000001685	ddx56	97	63.519	ENSHGLG00000017271	DDX56	97	63.704	Heterocephalus_glaber_female
ENSHCOG00000001685	ddx56	97	63.519	ENSHGLG00100015731	DDX56	97	63.704	Heterocephalus_glaber_male
ENSHCOG00000001685	ddx56	99	72.143	ENSIPUG00000006602	ddx56	97	73.153	Ictalurus_punctatus
ENSHCOG00000001685	ddx56	98	63.904	ENSSTOG00000000464	DDX56	98	63.904	Ictidomys_tridecemlineatus
ENSHCOG00000001685	ddx56	97	65.185	ENSJJAG00000014269	Ddx56	98	65.185	Jaculus_jaculus
ENSHCOG00000001685	ddx56	100	78.901	ENSKMAG00000016611	ddx56	100	78.901	Kryptolebias_marmoratus
ENSHCOG00000001685	ddx56	99	80.645	ENSLBEG00000026281	ddx56	99	81.183	Labrus_bergylta
ENSHCOG00000001685	ddx56	99	70.364	ENSLACG00000015551	DDX56	97	70.780	Latimeria_chalumnae
ENSHCOG00000001685	ddx56	100	74.555	ENSLOCG00000015185	ddx56	99	74.911	Lepisosteus_oculatus
ENSHCOG00000001685	ddx56	98	63.853	ENSLAFG00000018206	DDX56	98	63.853	Loxodonta_africana
ENSHCOG00000001685	ddx56	97	63.771	ENSMFAG00000041001	DDX56	97	63.771	Macaca_fascicularis
ENSHCOG00000001685	ddx56	97	63.771	ENSMMUG00000002645	DDX56	97	63.771	Macaca_mulatta
ENSHCOG00000001685	ddx56	97	63.771	ENSMNEG00000028492	DDX56	97	63.771	Macaca_nemestrina
ENSHCOG00000001685	ddx56	97	64.140	ENSMLEG00000043591	DDX56	97	64.140	Mandrillus_leucophaeus
ENSHCOG00000001685	ddx56	99	80.755	ENSMAMG00000007776	ddx56	99	81.835	Mastacembelus_armatus
ENSHCOG00000001685	ddx56	100	79.715	ENSMZEG00005009813	ddx56	100	80.249	Maylandia_zebra
ENSHCOG00000001685	ddx56	97	64.259	ENSMICG00000005550	DDX56	97	64.259	Microcebus_murinus
ENSHCOG00000001685	ddx56	97	63.352	ENSMOCG00000016782	Ddx56	97	63.352	Microtus_ochrogaster
ENSHCOG00000001685	ddx56	89	85.259	ENSMMOG00000009654	ddx56	95	85.259	Mola_mola
ENSHCOG00000001685	ddx56	98	59.083	ENSMODG00000016137	DDX56	97	59.083	Monodelphis_domestica
ENSHCOG00000001685	ddx56	68	77.454	ENSMALG00000016910	ddx56	99	77.454	Monopterus_albus
ENSHCOG00000001685	ddx56	97	63.168	MGP_CAROLIEiJ_G0016069	Ddx56	98	67.742	Mus_caroli
ENSHCOG00000001685	ddx56	97	63.333	ENSMUSG00000004393	Ddx56	98	67.339	Mus_musculus
ENSHCOG00000001685	ddx56	97	63.889	MGP_PahariEiJ_G0016822	Ddx56	98	66.935	Mus_pahari
ENSHCOG00000001685	ddx56	97	63.333	MGP_SPRETEiJ_G0016911	Ddx56	98	67.339	Mus_spretus
ENSHCOG00000001685	ddx56	98	63.469	ENSMPUG00000018196	DDX56	86	63.469	Mustela_putorius_furo
ENSHCOG00000001685	ddx56	97	63.333	ENSMLUG00000003509	DDX56	97	64.259	Myotis_lucifugus
ENSHCOG00000001685	ddx56	99	63.949	ENSNGAG00000018785	Ddx56	99	63.949	Nannospalax_galili
ENSHCOG00000001685	ddx56	96	77.547	ENSNBRG00000002656	ddx56	96	77.547	Neolamprologus_brichardi
ENSHCOG00000001685	ddx56	98	64.338	ENSNLEG00000003816	DDX56	98	64.338	Nomascus_leucogenys
ENSHCOG00000001685	ddx56	89	61.010	ENSMEUG00000006788	DDX56	99	61.010	Notamacropus_eugenii
ENSHCOG00000001685	ddx56	97	63.383	ENSOPRG00000000292	-	97	63.383	Ochotona_princeps
ENSHCOG00000001685	ddx56	67	67.027	ENSODEG00000014807	DDX56	99	67.024	Octodon_degus
ENSHCOG00000001685	ddx56	100	77.939	ENSONIG00000011509	ddx56	99	78.058	Oreochromis_niloticus
ENSHCOG00000001685	ddx56	72	56.079	ENSOANG00000015987	-	94	56.079	Ornithorhynchus_anatinus
ENSHCOG00000001685	ddx56	95	55.556	ENSOANG00000006320	-	98	55.932	Ornithorhynchus_anatinus
ENSHCOG00000001685	ddx56	97	64.312	ENSOCUG00000022918	DDX56	97	64.312	Oryctolagus_cuniculus
ENSHCOG00000001685	ddx56	99	80.866	ENSORLG00000001434	ddx56	99	80.866	Oryzias_latipes
ENSHCOG00000001685	ddx56	99	80.686	ENSORLG00020015718	ddx56	95	80.686	Oryzias_latipes_hni
ENSHCOG00000001685	ddx56	99	80.866	ENSORLG00015003004	ddx56	95	80.866	Oryzias_latipes_hsok
ENSHCOG00000001685	ddx56	99	80.325	ENSOMEG00000022072	ddx56	99	80.325	Oryzias_melastigma
ENSHCOG00000001685	ddx56	97	63.519	ENSOGAG00000009981	DDX56	97	64.074	Otolemur_garnettii
ENSHCOG00000001685	ddx56	97	65.009	ENSOARG00000015240	DDX56	97	65.009	Ovis_aries
ENSHCOG00000001685	ddx56	97	61.636	ENSPPAG00000029147	DDX56	97	61.636	Pan_paniscus
ENSHCOG00000001685	ddx56	97	52.302	ENSPPAG00000031263	-	97	52.302	Pan_paniscus
ENSHCOG00000001685	ddx56	98	62.936	ENSPPRG00000014594	DDX56	98	63.853	Panthera_pardus
ENSHCOG00000001685	ddx56	87	59.708	ENSPTIG00000019500	DDX56	92	60.543	Panthera_tigris_altaica
ENSHCOG00000001685	ddx56	92	51.650	ENSPTRG00000052765	-	98	53.010	Pan_troglodytes
ENSHCOG00000001685	ddx56	97	64.325	ENSPTRG00000019147	DDX56	97	64.325	Pan_troglodytes
ENSHCOG00000001685	ddx56	97	63.771	ENSPANG00000002446	DDX56	97	63.771	Papio_anubis
ENSHCOG00000001685	ddx56	98	77.248	ENSPKIG00000018998	ddx56	97	77.248	Paramormyrops_kingsleyae
ENSHCOG00000001685	ddx56	96	79.925	ENSPMGG00000017421	ddx56	99	79.925	Periophthalmus_magnuspinnatus
ENSHCOG00000001685	ddx56	98	66.055	ENSPCIG00000009336	DDX56	97	66.055	Phascolarctos_cinereus
ENSHCOG00000001685	ddx56	99	81.261	ENSPFOG00000018658	ddx56	99	81.622	Poecilia_formosa
ENSHCOG00000001685	ddx56	99	81.441	ENSPLAG00000019208	ddx56	99	81.802	Poecilia_latipinna
ENSHCOG00000001685	ddx56	99	81.261	ENSPMEG00000001775	ddx56	99	81.622	Poecilia_mexicana
ENSHCOG00000001685	ddx56	99	81.802	ENSPREG00000015142	ddx56	99	81.982	Poecilia_reticulata
ENSHCOG00000001685	ddx56	97	64.325	ENSPPYG00000017591	DDX56	97	64.325	Pongo_abelii
ENSHCOG00000001685	ddx56	94	63.842	ENSPCAG00000011499	DDX56	100	61.959	Procavia_capensis
ENSHCOG00000001685	ddx56	97	64.259	ENSPCOG00000024864	DDX56	97	64.259	Propithecus_coquereli
ENSHCOG00000001685	ddx56	87	68.720	ENSPVAG00000000791	DDX56	86	68.720	Pteropus_vampyrus
ENSHCOG00000001685	ddx56	100	79.537	ENSPNYG00000019212	ddx56	100	80.071	Pundamilia_nyererei
ENSHCOG00000001685	ddx56	98	75.676	ENSPNAG00000025446	ddx56	99	76.036	Pygocentrus_nattereri
ENSHCOG00000001685	ddx56	97	63.704	ENSRNOG00000004670	Ddx56	97	63.704	Rattus_norvegicus
ENSHCOG00000001685	ddx56	97	63.956	ENSRBIG00000030140	DDX56	97	63.956	Rhinopithecus_bieti
ENSHCOG00000001685	ddx56	97	63.771	ENSRROG00000044428	DDX56	97	63.771	Rhinopithecus_roxellana
ENSHCOG00000001685	ddx56	96	44.330	YLR276C	-	97	44.597	Saccharomyces_cerevisiae
ENSHCOG00000001685	ddx56	97	63.771	ENSSBOG00000034339	DDX56	97	63.771	Saimiri_boliviensis_boliviensis
ENSHCOG00000001685	ddx56	85	65.319	ENSSHAG00000016615	DDX56	97	65.319	Sarcophilus_harrisii
ENSHCOG00000001685	ddx56	100	75.936	ENSSFOG00015012795	ddx56	100	75.936	Scleropages_formosus
ENSHCOG00000001685	ddx56	99	81.720	ENSSMAG00000011280	ddx56	99	83.769	Scophthalmus_maximus
ENSHCOG00000001685	ddx56	100	82.416	ENSSDUG00000023597	ddx56	100	83.481	Seriola_dumerili
ENSHCOG00000001685	ddx56	100	82.060	ENSSLDG00000018369	ddx56	100	83.126	Seriola_lalandi_dorsalis
ENSHCOG00000001685	ddx56	75	77.586	ENSSARG00000014363	DDX56	77	72.464	Sorex_araneus
ENSHCOG00000001685	ddx56	99	70.073	ENSSPUG00000000784	DDX56	96	70.255	Sphenodon_punctatus
ENSHCOG00000001685	ddx56	96	83.769	ENSSPAG00000009392	ddx56	99	84.701	Stegastes_partitus
ENSHCOG00000001685	ddx56	99	63.091	ENSSSCG00000016745	DDX56	99	63.472	Sus_scrofa
ENSHCOG00000001685	ddx56	99	80.000	ENSTRUG00000018623	ddx56	99	80.714	Takifugu_rubripes
ENSHCOG00000001685	ddx56	99	78.723	ENSTNIG00000013593	ddx56	99	79.078	Tetraodon_nigroviridis
ENSHCOG00000001685	ddx56	97	63.653	ENSTBEG00000007119	DDX56	97	63.956	Tupaia_belangeri
ENSHCOG00000001685	ddx56	86	61.667	ENSTTRG00000010552	DDX56	99	62.917	Tursiops_truncatus
ENSHCOG00000001685	ddx56	98	63.469	ENSUAMG00000014194	DDX56	97	64.207	Ursus_americanus
ENSHCOG00000001685	ddx56	98	63.469	ENSUMAG00000009666	DDX56	97	64.207	Ursus_maritimus
ENSHCOG00000001685	ddx56	98	62.018	ENSVVUG00000011905	DDX56	98	62.774	Vulpes_vulpes
ENSHCOG00000001685	ddx56	98	70.932	ENSXETG00000019000	ddx56	99	71.168	Xenopus_tropicalis
ENSHCOG00000001685	ddx56	99	78.285	ENSXCOG00000017413	ddx56	99	78.285	Xiphophorus_couchianus
ENSHCOG00000001685	ddx56	99	81.688	ENSXMAG00000018749	ddx56	99	82.162	Xiphophorus_maculatus