EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001703 (Gene tree)
Gene ID: 109517179
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3911 bases
Position: chrKV880000.1:287178-291088
Accession: 109517179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000819	MRP-S27	PF10037.9	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013126	-	1249	XM_019872178	ENSHCOP00000000819	385 (aa)	XP_019727737	-

Gene Model

Click here to download ENSHCOG00000001703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001703	ptcd2	95	45.889	ENSG00000049883	PTCD2	97	45.889	Homo_sapiens
ENSHCOG00000001703	ptcd2	100	65.455	ENSAPOG00000020682	ptcd2	100	65.455	Acanthochromis_polyacanthus
ENSHCOG00000001703	ptcd2	92	46.556	ENSAMEG00000007194	PTCD2	93	46.556	Ailuropoda_melanoleuca
ENSHCOG00000001703	ptcd2	90	65.616	ENSACIG00000002053	ptcd2	100	65.616	Amphilophus_citrinellus
ENSHCOG00000001703	ptcd2	100	65.195	ENSAOCG00000006616	ptcd2	98	65.195	Amphiprion_ocellaris
ENSHCOG00000001703	ptcd2	100	65.455	ENSAPEG00000022926	ptcd2	98	65.455	Amphiprion_percula
ENSHCOG00000001703	ptcd2	92	50.843	ENSACAG00000009747	PTCD2	91	50.843	Anolis_carolinensis
ENSHCOG00000001703	ptcd2	95	45.358	ENSANAG00000029353	PTCD2	97	45.358	Aotus_nancymaae
ENSHCOG00000001703	ptcd2	100	68.052	ENSACLG00000027742	ptcd2	98	68.052	Astatotilapia_calliptera
ENSHCOG00000001703	ptcd2	92	50.423	ENSAMXG00000029404	ptcd2	87	51.376	Astyanax_mexicanus
ENSHCOG00000001703	ptcd2	92	46.685	ENSBTAG00000014675	PTCD2	94	46.685	Bos_taurus
ENSHCOG00000001703	ptcd2	95	44.297	ENSCJAG00000016364	PTCD2	97	44.297	Callithrix_jacchus
ENSHCOG00000001703	ptcd2	92	47.934	ENSCAFG00000007982	PTCD2	85	47.934	Canis_familiaris
ENSHCOG00000001703	ptcd2	90	48.415	ENSCAFG00020019147	PTCD2	97	48.415	Canis_lupus_dingo
ENSHCOG00000001703	ptcd2	97	45.170	ENSCHIG00000017118	PTCD2	99	45.170	Capra_hircus
ENSHCOG00000001703	ptcd2	90	46.991	ENSCPOG00000040168	PTCD2	91	46.991	Cavia_porcellus
ENSHCOG00000001703	ptcd2	95	45.093	ENSCCAG00000029389	-	97	45.093	Cebus_capucinus
ENSHCOG00000001703	ptcd2	76	46.535	ENSCCAG00000021996	-	94	46.254	Cebus_capucinus
ENSHCOG00000001703	ptcd2	95	46.154	ENSCATG00000019069	PTCD2	98	46.154	Cercocebus_atys
ENSHCOG00000001703	ptcd2	90	48.711	ENSCLAG00000000072	PTCD2	91	48.711	Chinchilla_lanigera
ENSHCOG00000001703	ptcd2	90	47.278	ENSCSAG00000015623	PTCD2	98	46.154	Chlorocebus_sabaeus
ENSHCOG00000001703	ptcd2	66	52.353	ENSCHOG00000010634	PTCD2	73	52.353	Choloepus_hoffmanni
ENSHCOG00000001703	ptcd2	96	46.631	ENSCPBG00000000216	PTCD2	95	46.631	Chrysemys_picta_bellii
ENSHCOG00000001703	ptcd2	95	45.889	ENSCANG00000035636	PTCD2	97	45.889	Colobus_angolensis_palliatus
ENSHCOG00000001703	ptcd2	92	47.283	ENSCGRG00001015289	Ptcd2	80	47.283	Cricetulus_griseus_chok1gshd
ENSHCOG00000001703	ptcd2	92	47.283	ENSCGRG00000006193	Ptcd2	80	47.283	Cricetulus_griseus_crigri
ENSHCOG00000001703	ptcd2	99	64.752	ENSCVAG00000001285	ptcd2	97	64.752	Cyprinodon_variegatus
ENSHCOG00000001703	ptcd2	91	53.429	ENSDARG00000035391	ptcd2	85	54.769	Danio_rerio
ENSHCOG00000001703	ptcd2	90	46.991	ENSDNOG00000008719	PTCD2	91	46.991	Dasypus_novemcinctus
ENSHCOG00000001703	ptcd2	90	47.564	ENSDORG00000004921	Ptcd2	90	47.564	Dipodomys_ordii
ENSHCOG00000001703	ptcd2	96	44.764	ENSETEG00000016542	PTCD2	97	44.764	Echinops_telfairi
ENSHCOG00000001703	ptcd2	91	47.443	ENSEASG00005018038	PTCD2	92	47.443	Equus_asinus_asinus
ENSHCOG00000001703	ptcd2	92	47.191	ENSECAG00000007022	PTCD2	91	47.191	Equus_caballus
ENSHCOG00000001703	ptcd2	90	46.264	ENSEEUG00000014031	PTCD2	90	46.264	Erinaceus_europaeus
ENSHCOG00000001703	ptcd2	92	62.465	ENSELUG00000003584	ptcd2	93	62.465	Esox_lucius
ENSHCOG00000001703	ptcd2	79	48.534	ENSFCAG00000045432	PTCD2	72	48.534	Felis_catus
ENSHCOG00000001703	ptcd2	85	43.598	ENSFALG00000010299	PTCD2	99	43.598	Ficedula_albicollis
ENSHCOG00000001703	ptcd2	92	46.348	ENSFDAG00000018461	PTCD2	93	46.348	Fukomys_damarensis
ENSHCOG00000001703	ptcd2	98	61.214	ENSGMOG00000003637	ptcd2	98	61.214	Gadus_morhua
ENSHCOG00000001703	ptcd2	92	41.972	ENSGALG00000038260	PTCD2	100	40.838	Gallus_gallus
ENSHCOG00000001703	ptcd2	96	48.518	ENSGAGG00000021952	PTCD2	95	48.518	Gopherus_agassizii
ENSHCOG00000001703	ptcd2	95	45.889	ENSGGOG00000010695	PTCD2	97	45.889	Gorilla_gorilla
ENSHCOG00000001703	ptcd2	100	67.792	ENSHBUG00000009191	ptcd2	98	67.792	Haplochromis_burtoni
ENSHCOG00000001703	ptcd2	92	47.765	ENSHGLG00000001234	PTCD2	93	47.765	Heterocephalus_glaber_female
ENSHCOG00000001703	ptcd2	92	47.765	ENSHGLG00100015419	PTCD2	93	47.765	Heterocephalus_glaber_male
ENSHCOG00000001703	ptcd2	95	56.098	ENSIPUG00000006080	ptcd2	94	56.749	Ictalurus_punctatus
ENSHCOG00000001703	ptcd2	90	46.286	ENSSTOG00000006596	PTCD2	91	46.286	Ictidomys_tridecemlineatus
ENSHCOG00000001703	ptcd2	90	47.851	ENSJJAG00000024388	Ptcd2	91	47.851	Jaculus_jaculus
ENSHCOG00000001703	ptcd2	97	56.233	ENSKMAG00000009329	ptcd2	99	55.352	Kryptolebias_marmoratus
ENSHCOG00000001703	ptcd2	98	61.376	ENSLBEG00000024871	ptcd2	96	61.376	Labrus_bergylta
ENSHCOG00000001703	ptcd2	100	52.591	ENSLOCG00000011122	ptcd2	100	52.591	Lepisosteus_oculatus
ENSHCOG00000001703	ptcd2	72	52.536	ENSLAFG00000004115	PTCD2	93	51.379	Loxodonta_africana
ENSHCOG00000001703	ptcd2	95	46.684	ENSMFAG00000031516	PTCD2	97	46.684	Macaca_fascicularis
ENSHCOG00000001703	ptcd2	92	46.832	ENSMNEG00000007537	PTCD2	95	46.832	Macaca_nemestrina
ENSHCOG00000001703	ptcd2	95	46.154	ENSMLEG00000031093	PTCD2	97	46.154	Mandrillus_leucophaeus
ENSHCOG00000001703	ptcd2	100	66.234	ENSMAMG00000018529	ptcd2	100	66.234	Mastacembelus_armatus
ENSHCOG00000001703	ptcd2	100	68.052	ENSMZEG00005003625	ptcd2	98	68.052	Maylandia_zebra
ENSHCOG00000001703	ptcd2	90	42.120	ENSMGAG00000005033	PTCD2	100	42.120	Meleagris_gallopavo
ENSHCOG00000001703	ptcd2	92	47.297	ENSMAUG00000020253	Ptcd2	94	47.297	Mesocricetus_auratus
ENSHCOG00000001703	ptcd2	92	46.154	ENSMICG00000004535	PTCD2	93	46.154	Microcebus_murinus
ENSHCOG00000001703	ptcd2	92	48.077	ENSMOCG00000019985	Ptcd2	95	48.077	Microtus_ochrogaster
ENSHCOG00000001703	ptcd2	92	46.910	ENSMODG00000001695	PTCD2	92	46.910	Monodelphis_domestica
ENSHCOG00000001703	ptcd2	100	68.312	ENSMALG00000022372	ptcd2	100	68.312	Monopterus_albus
ENSHCOG00000001703	ptcd2	92	46.978	MGP_CAROLIEiJ_G0018829	Ptcd2	95	46.978	Mus_caroli
ENSHCOG00000001703	ptcd2	92	46.429	ENSMUSG00000021650	Ptcd2	95	46.429	Mus_musculus
ENSHCOG00000001703	ptcd2	92	48.077	MGP_PahariEiJ_G0015904	Ptcd2	95	48.077	Mus_pahari
ENSHCOG00000001703	ptcd2	92	47.253	MGP_SPRETEiJ_G0019711	Ptcd2	95	47.253	Mus_spretus
ENSHCOG00000001703	ptcd2	92	47.658	ENSMPUG00000014401	PTCD2	95	47.658	Mustela_putorius_furo
ENSHCOG00000001703	ptcd2	90	46.132	ENSMLUG00000007374	PTCD2	92	45.938	Myotis_lucifugus
ENSHCOG00000001703	ptcd2	90	46.418	ENSNGAG00000005027	Ptcd2	91	46.418	Nannospalax_galili
ENSHCOG00000001703	ptcd2	86	69.091	ENSNBRG00000000092	-	100	69.091	Neolamprologus_brichardi
ENSHCOG00000001703	ptcd2	100	67.792	ENSNBRG00000008174	ptcd2	100	67.792	Neolamprologus_brichardi
ENSHCOG00000001703	ptcd2	95	45.093	ENSNLEG00000004516	PTCD2	97	45.093	Nomascus_leucogenys
ENSHCOG00000001703	ptcd2	95	45.699	ENSOPRG00000007290	PTCD2	95	45.699	Ochotona_princeps
ENSHCOG00000001703	ptcd2	96	47.354	ENSODEG00000016417	PTCD2	98	47.354	Octodon_degus
ENSHCOG00000001703	ptcd2	86	66.163	ENSONIG00000011269	ptcd2	96	66.163	Oreochromis_niloticus
ENSHCOG00000001703	ptcd2	90	47.851	ENSOCUG00000007970	PTCD2	98	46.133	Oryctolagus_cuniculus
ENSHCOG00000001703	ptcd2	99	65.526	ENSORLG00000003851	ptcd2	97	66.053	Oryzias_latipes
ENSHCOG00000001703	ptcd2	99	64.474	ENSORLG00020009823	ptcd2	98	65.000	Oryzias_latipes_hni
ENSHCOG00000001703	ptcd2	90	66.185	ENSORLG00015016777	ptcd2	99	66.763	Oryzias_latipes_hsok
ENSHCOG00000001703	ptcd2	99	63.947	ENSOMEG00000012396	ptcd2	92	63.947	Oryzias_melastigma
ENSHCOG00000001703	ptcd2	90	47.278	ENSOGAG00000008390	PTCD2	90	47.278	Otolemur_garnettii
ENSHCOG00000001703	ptcd2	94	46.216	ENSOARG00000005087	PTCD2	95	46.216	Ovis_aries
ENSHCOG00000001703	ptcd2	95	46.154	ENSPPAG00000028480	PTCD2	97	46.154	Pan_paniscus
ENSHCOG00000001703	ptcd2	95	46.154	ENSPTRG00000016968	PTCD2	97	46.154	Pan_troglodytes
ENSHCOG00000001703	ptcd2	90	47.110	ENSPANG00000006611	PTCD2	89	47.110	Papio_anubis
ENSHCOG00000001703	ptcd2	100	51.680	ENSPKIG00000019896	ptcd2	100	51.680	Paramormyrops_kingsleyae
ENSHCOG00000001703	ptcd2	82	50.473	ENSPSIG00000014559	PTCD2	98	50.473	Pelodiscus_sinensis
ENSHCOG00000001703	ptcd2	90	50.427	ENSPEMG00000000884	Ptcd2	91	49.573	Peromyscus_maniculatus_bairdii
ENSHCOG00000001703	ptcd2	92	47.339	ENSPCIG00000029047	PTCD2	92	47.339	Phascolarctos_cinereus
ENSHCOG00000001703	ptcd2	99	62.597	ENSPLAG00000010456	ptcd2	99	62.402	Poecilia_latipinna
ENSHCOG00000001703	ptcd2	99	63.969	ENSPREG00000021797	ptcd2	97	63.969	Poecilia_reticulata
ENSHCOG00000001703	ptcd2	95	41.379	ENSPPYG00000015543	PTCD2	97	41.379	Pongo_abelii
ENSHCOG00000001703	ptcd2	75	43.771	ENSPCAG00000006806	PTCD2	94	43.771	Procavia_capensis
ENSHCOG00000001703	ptcd2	91	46.724	ENSPVAG00000010935	PTCD2	90	46.724	Pteropus_vampyrus
ENSHCOG00000001703	ptcd2	100	67.792	ENSPNYG00000003122	ptcd2	98	67.792	Pundamilia_nyererei
ENSHCOG00000001703	ptcd2	100	59.794	ENSPNAG00000021490	ptcd2	100	59.536	Pygocentrus_nattereri
ENSHCOG00000001703	ptcd2	92	48.077	ENSRNOG00000028403	Ptcd2	95	48.077	Rattus_norvegicus
ENSHCOG00000001703	ptcd2	95	42.287	ENSRBIG00000032929	PTCD2	96	42.287	Rhinopithecus_bieti
ENSHCOG00000001703	ptcd2	95	46.277	ENSRROG00000000080	PTCD2	98	46.277	Rhinopithecus_roxellana
ENSHCOG00000001703	ptcd2	95	45.093	ENSSBOG00000018911	PTCD2	98	45.093	Saimiri_boliviensis_boliviensis
ENSHCOG00000001703	ptcd2	92	45.098	ENSSHAG00000003833	PTCD2	85	45.921	Sarcophilus_harrisii
ENSHCOG00000001703	ptcd2	100	51.546	ENSSFOG00015015415	ptcd2	100	51.546	Scleropages_formosus
ENSHCOG00000001703	ptcd2	100	63.636	ENSSMAG00000010350	ptcd2	100	63.636	Scophthalmus_maximus
ENSHCOG00000001703	ptcd2	98	68.883	ENSSDUG00000008142	ptcd2	93	68.883	Seriola_dumerili
ENSHCOG00000001703	ptcd2	98	68.617	ENSSLDG00000015284	ptcd2	98	68.617	Seriola_lalandi_dorsalis
ENSHCOG00000001703	ptcd2	71	44.000	ENSSARG00000004983	PTCD2	87	44.000	Sorex_araneus
ENSHCOG00000001703	ptcd2	96	44.624	ENSSPUG00000000176	PTCD2	88	45.845	Sphenodon_punctatus
ENSHCOG00000001703	ptcd2	100	59.481	ENSSPAG00000008591	ptcd2	98	59.481	Stegastes_partitus
ENSHCOG00000001703	ptcd2	94	45.822	ENSSSCG00000016975	PTCD2	87	45.822	Sus_scrofa
ENSHCOG00000001703	ptcd2	90	43.642	ENSTGUG00000005705	PTCD2	99	43.642	Taeniopygia_guttata
ENSHCOG00000001703	ptcd2	90	46.552	ENSTBEG00000016559	PTCD2	90	46.552	Tupaia_belangeri
ENSHCOG00000001703	ptcd2	94	47.011	ENSTTRG00000011851	PTCD2	95	47.011	Tursiops_truncatus
ENSHCOG00000001703	ptcd2	92	46.556	ENSUAMG00000007583	PTCD2	85	46.556	Ursus_americanus
ENSHCOG00000001703	ptcd2	92	46.556	ENSUMAG00000007666	PTCD2	95	46.556	Ursus_maritimus
ENSHCOG00000001703	ptcd2	90	45.714	ENSVPAG00000009597	PTCD2	89	45.714	Vicugna_pacos
ENSHCOG00000001703	ptcd2	90	48.424	ENSVVUG00000007299	-	93	48.179	Vulpes_vulpes
ENSHCOG00000001703	ptcd2	90	48.442	ENSXETG00000031652	PTCD2	91	48.442	Xenopus_tropicalis
ENSHCOG00000001703	ptcd2	99	61.880	ENSXMAG00000005940	ptcd2	90	61.880	Xiphophorus_maculatus