EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001705 (Gene tree)
Gene ID: 109532264
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8535 bases
Position: chrKV880451.1:1178794-1187328
Accession: 109532264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017710	RRM_1	PF00076.22	4.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000013123	-	2623	XM_019897043	ENSHCOP00000017710	739 (aa)	XP_019752602	-

Gene Model

Click here to download ENSHCOG00000001705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001705	safb	96	41.065	ENSG00000160633	SAFB	88	55.102	Homo_sapiens
ENSHCOG00000001705	safb	99	67.436	ENSAPOG00000022508	safb	94	66.881	Acanthochromis_polyacanthus
ENSHCOG00000001705	safb	67	37.435	ENSAMEG00000012254	SAFB	92	37.225	Ailuropoda_melanoleuca
ENSHCOG00000001705	safb	99	63.001	ENSACIG00000006247	safb	95	61.628	Amphilophus_citrinellus
ENSHCOG00000001705	safb	95	67.026	ENSAOCG00000006308	safb	92	66.166	Amphiprion_ocellaris
ENSHCOG00000001705	safb	99	67.350	ENSAPEG00000023342	safb	94	66.667	Amphiprion_percula
ENSHCOG00000001705	safb	99	67.766	ENSATEG00000004998	safb	94	66.038	Anabas_testudineus
ENSHCOG00000001705	safb	63	41.230	ENSAPLG00000006355	-	94	46.289	Anas_platyrhynchos
ENSHCOG00000001705	safb	99	38.549	ENSAPLG00000005780	-	98	41.204	Anas_platyrhynchos
ENSHCOG00000001705	safb	96	40.816	ENSANAG00000028821	SAFB	91	38.068	Aotus_nancymaae
ENSHCOG00000001705	safb	99	65.000	ENSACLG00000001926	safb	94	64.185	Astatotilapia_calliptera
ENSHCOG00000001705	safb	98	55.177	ENSAMXG00000018154	safb	94	54.192	Astyanax_mexicanus
ENSHCOG00000001705	safb	99	39.016	ENSBTAG00000007875	SAFB	93	38.838	Bos_taurus
ENSHCOG00000001705	safb	67	37.050	ENSCAFG00000018803	SAFB	79	37.284	Canis_familiaris
ENSHCOG00000001705	safb	67	37.050	ENSCAFG00020018943	SAFB	91	37.514	Canis_lupus_dingo
ENSHCOG00000001705	safb	99	39.359	ENSCHIG00000007262	SAFB	93	38.908	Capra_hircus
ENSHCOG00000001705	safb	59	42.553	ENSTSYG00000001851	-	80	41.124	Carlito_syrichta
ENSHCOG00000001705	safb	52	52.852	ENSCAPG00000012121	SAFB	55	53.846	Cavia_aperea
ENSHCOG00000001705	safb	52	52.852	ENSCPOG00000026322	SAFB	51	46.627	Cavia_porcellus
ENSHCOG00000001705	safb	96	40.732	ENSCCAG00000020193	SAFB	91	38.030	Cebus_capucinus
ENSHCOG00000001705	safb	96	40.148	ENSCATG00000029994	SAFB	91	37.356	Cercocebus_atys
ENSHCOG00000001705	safb	64	36.632	ENSCLAG00000007734	SAFB	91	38.331	Chinchilla_lanigera
ENSHCOG00000001705	safb	66	37.564	ENSCSAG00000009949	SAFB	91	37.356	Chlorocebus_sabaeus
ENSHCOG00000001705	safb	97	41.732	ENSCPBG00000010936	-	92	42.892	Chrysemys_picta_bellii
ENSHCOG00000001705	safb	97	42.136	ENSCPBG00000010928	-	96	41.677	Chrysemys_picta_bellii
ENSHCOG00000001705	safb	96	39.401	ENSCANG00000019754	-	89	35.986	Colobus_angolensis_palliatus
ENSHCOG00000001705	safb	96	34.149	ENSCANG00000004774	-	67	37.722	Colobus_angolensis_palliatus
ENSHCOG00000001705	safb	99	59.235	ENSCSEG00000019870	safb	94	59.103	Cynoglossus_semilaevis
ENSHCOG00000001705	safb	99	58.995	ENSCVAG00000002226	safb	93	59.524	Cyprinodon_variegatus
ENSHCOG00000001705	safb	98	55.263	ENSDARG00000020467	safb	94	54.435	Danio_rerio
ENSHCOG00000001705	safb	66	38.038	ENSDNOG00000015746	SAFB	95	36.510	Dasypus_novemcinctus
ENSHCOG00000001705	safb	64	36.968	ENSDORG00000016200	Safb	91	35.682	Dipodomys_ordii
ENSHCOG00000001705	safb	59	36.293	ENSEASG00005023019	SAFB	91	35.950	Equus_asinus_asinus
ENSHCOG00000001705	safb	99	58.177	ENSELUG00000022327	safb	94	57.587	Esox_lucius
ENSHCOG00000001705	safb	67	37.907	ENSFCAG00000011835	SAFB	91	37.931	Felis_catus
ENSHCOG00000001705	safb	99	37.259	ENSFALG00000013882	-	84	40.185	Ficedula_albicollis
ENSHCOG00000001705	safb	61	37.919	ENSFALG00000013881	-	92	42.579	Ficedula_albicollis
ENSHCOG00000001705	safb	78	48.696	ENSFDAG00000020306	SAFB	84	44.348	Fukomys_damarensis
ENSHCOG00000001705	safb	99	60.841	ENSFHEG00000004219	safb	93	61.235	Fundulus_heteroclitus
ENSHCOG00000001705	safb	99	57.995	ENSGMOG00000014280	safb	94	58.408	Gadus_morhua
ENSHCOG00000001705	safb	99	38.673	ENSGALG00000013365	-	91	41.287	Gallus_gallus
ENSHCOG00000001705	safb	64	38.280	ENSGALG00000001948	-	86	43.765	Gallus_gallus
ENSHCOG00000001705	safb	99	58.764	ENSGAFG00000016162	safb	94	58.260	Gambusia_affinis
ENSHCOG00000001705	safb	99	60.994	ENSGACG00000011385	safb	94	60.804	Gasterosteus_aculeatus
ENSHCOG00000001705	safb	73	49.249	ENSGAGG00000017702	-	88	48.630	Gopherus_agassizii
ENSHCOG00000001705	safb	95	40.997	ENSGAGG00000008424	-	92	40.460	Gopherus_agassizii
ENSHCOG00000001705	safb	96	41.112	ENSGGOG00000015109	SAFB	91	38.570	Gorilla_gorilla
ENSHCOG00000001705	safb	99	61.257	ENSHBUG00000009218	safb	93	61.075	Haplochromis_burtoni
ENSHCOG00000001705	safb	64	36.063	ENSHGLG00000015883	SAFB	91	36.117	Heterocephalus_glaber_female
ENSHCOG00000001705	safb	99	33.254	ENSHGLG00100004228	SAFB	66	36.237	Heterocephalus_glaber_male
ENSHCOG00000001705	safb	98	57.928	ENSIPUG00000024869	safb2	94	56.055	Ictalurus_punctatus
ENSHCOG00000001705	safb	64	36.824	ENSSTOG00000002783	SAFB	98	36.436	Ictidomys_tridecemlineatus
ENSHCOG00000001705	safb	64	37.229	ENSJJAG00000009021	Safb	92	36.730	Jaculus_jaculus
ENSHCOG00000001705	safb	99	65.206	ENSKMAG00000022308	safb	94	64.562	Kryptolebias_marmoratus
ENSHCOG00000001705	safb	99	64.045	ENSLBEG00000006015	safb	94	63.106	Labrus_bergylta
ENSHCOG00000001705	safb	64	39.168	ENSLACG00000018090	SAFB	94	42.647	Latimeria_chalumnae
ENSHCOG00000001705	safb	99	55.744	ENSLOCG00000003613	safb	96	55.515	Lepisosteus_oculatus
ENSHCOG00000001705	safb	97	38.985	ENSLAFG00000003840	SAFB	92	36.920	Loxodonta_africana
ENSHCOG00000001705	safb	96	40.330	ENSMFAG00000003885	SAFB	91	37.471	Macaca_fascicularis
ENSHCOG00000001705	safb	96	40.719	ENSMMUG00000017970	SAFB	91	38.335	Macaca_mulatta
ENSHCOG00000001705	safb	66	35.552	ENSMNEG00000035637	SAFB	91	36.427	Macaca_nemestrina
ENSHCOG00000001705	safb	65	34.146	ENSMLEG00000038637	SAFB	91	35.198	Mandrillus_leucophaeus
ENSHCOG00000001705	safb	99	65.783	ENSMAMG00000003357	safb	86	65.152	Mastacembelus_armatus
ENSHCOG00000001705	safb	99	66.162	ENSMZEG00005009120	safb	94	64.817	Maylandia_zebra
ENSHCOG00000001705	safb	64	38.462	ENSMGAG00000001051	-	91	41.964	Meleagris_gallopavo
ENSHCOG00000001705	safb	99	39.200	ENSMGAG00000001101	-	95	41.580	Meleagris_gallopavo
ENSHCOG00000001705	safb	66	38.687	ENSMICG00000008739	-	91	38.249	Microcebus_murinus
ENSHCOG00000001705	safb	87	35.995	ENSMICG00000046795	-	87	34.819	Microcebus_murinus
ENSHCOG00000001705	safb	51	52.308	ENSMOCG00000014040	Safb	76	43.110	Microtus_ochrogaster
ENSHCOG00000001705	safb	96	38.603	ENSMODG00000001236	SAFB	92	35.982	Monodelphis_domestica
ENSHCOG00000001705	safb	99	64.780	ENSMALG00000020330	safb	94	63.396	Monopterus_albus
ENSHCOG00000001705	safb	67	36.869	ENSMPUG00000006123	SAFB	86	37.199	Mustela_putorius_furo
ENSHCOG00000001705	safb	99	38.870	ENSMLUG00000001081	SAFB	84	37.563	Myotis_lucifugus
ENSHCOG00000001705	safb	64	35.666	ENSNGAG00000019882	Safb	92	36.457	Nannospalax_galili
ENSHCOG00000001705	safb	96	41.155	ENSNLEG00000013551	SAFB	88	38.155	Nomascus_leucogenys
ENSHCOG00000001705	safb	64	36.222	ENSODEG00000014838	SAFB	91	36.291	Octodon_degus
ENSHCOG00000001705	safb	99	65.234	ENSONIG00000002318	safb	94	64.141	Oreochromis_niloticus
ENSHCOG00000001705	safb	92	35.870	ENSOCUG00000014628	SAFB	96	34.217	Oryctolagus_cuniculus
ENSHCOG00000001705	safb	98	64.644	ENSORLG00000016989	safb	94	62.868	Oryzias_latipes
ENSHCOG00000001705	safb	65	58.367	ENSORLG00020000404	safb	93	56.806	Oryzias_latipes_hni
ENSHCOG00000001705	safb	98	64.512	ENSORLG00015010733	safb	94	62.901	Oryzias_latipes_hsok
ENSHCOG00000001705	safb	99	65.459	ENSOMEG00000009066	safb	94	64.249	Oryzias_melastigma
ENSHCOG00000001705	safb	64	38.612	ENSOGAG00000027769	SAFB	85	38.385	Otolemur_garnettii
ENSHCOG00000001705	safb	99	35.517	ENSOARG00000007662	-	93	35.234	Ovis_aries
ENSHCOG00000001705	safb	87	36.685	ENSOARG00000007856	-	97	35.933	Ovis_aries
ENSHCOG00000001705	safb	96	40.968	ENSPPAG00000035129	SAFB	91	37.919	Pan_paniscus
ENSHCOG00000001705	safb	67	37.736	ENSPPRG00000017197	SAFB	91	37.816	Panthera_pardus
ENSHCOG00000001705	safb	96	40.968	ENSPTRG00000010335	SAFB	91	37.915	Pan_troglodytes
ENSHCOG00000001705	safb	96	40.471	ENSPANG00000007770	SAFB	91	37.471	Papio_anubis
ENSHCOG00000001705	safb	99	56.311	ENSPKIG00000009902	safb	94	54.776	Paramormyrops_kingsleyae
ENSHCOG00000001705	safb	99	43.311	ENSPSIG00000009367	-	92	40.586	Pelodiscus_sinensis
ENSHCOG00000001705	safb	99	44.207	ENSPSIG00000011679	-	97	43.878	Pelodiscus_sinensis
ENSHCOG00000001705	safb	61	45.455	ENSPCIG00000009504	-	97	45.984	Phascolarctos_cinereus
ENSHCOG00000001705	safb	99	61.488	ENSPFOG00000007745	safb	93	61.488	Poecilia_formosa
ENSHCOG00000001705	safb	99	58.552	ENSPLAG00000001614	safb	94	58.728	Poecilia_latipinna
ENSHCOG00000001705	safb	99	60.836	ENSPMEG00000021023	safb	93	61.227	Poecilia_mexicana
ENSHCOG00000001705	safb	99	59.692	ENSPREG00000012496	safb	93	59.103	Poecilia_reticulata
ENSHCOG00000001705	safb	66	38.488	ENSPPYG00000009428	SAFB	91	37.558	Pongo_abelii
ENSHCOG00000001705	safb	64	33.276	ENSPCAG00000006475	SAFB	85	35.238	Procavia_capensis
ENSHCOG00000001705	safb	96	38.211	ENSPCOG00000014090	SAFB	91	36.986	Propithecus_coquereli
ENSHCOG00000001705	safb	97	36.830	ENSPVAG00000004913	SAFB	76	35.833	Pteropus_vampyrus
ENSHCOG00000001705	safb	99	56.089	ENSPNAG00000021838	safb	94	55.802	Pygocentrus_nattereri
ENSHCOG00000001705	safb	66	39.051	ENSRBIG00000042509	SAFB	82	39.349	Rhinopithecus_bieti
ENSHCOG00000001705	safb	96	40.471	ENSRROG00000029278	SAFB	85	38.155	Rhinopithecus_roxellana
ENSHCOG00000001705	safb	96	40.807	ENSSBOG00000026291	SAFB	91	38.090	Saimiri_boliviensis_boliviensis
ENSHCOG00000001705	safb	99	56.295	ENSSFOG00015008156	safb	94	56.295	Scleropages_formosus
ENSHCOG00000001705	safb	99	64.892	ENSSMAG00000009316	safb	94	65.355	Scophthalmus_maximus
ENSHCOG00000001705	safb	99	63.943	ENSSDUG00000009652	safb	94	64.851	Seriola_dumerili
ENSHCOG00000001705	safb	99	66.582	ENSSLDG00000001670	safb	94	67.263	Seriola_lalandi_dorsalis
ENSHCOG00000001705	safb	64	37.590	ENSSARG00000010475	SAFB	98	36.818	Sorex_araneus
ENSHCOG00000001705	safb	61	36.911	ENSSPUG00000009747	-	95	36.398	Sphenodon_punctatus
ENSHCOG00000001705	safb	99	61.257	ENSSPAG00000015682	safb	90	65.599	Stegastes_partitus
ENSHCOG00000001705	safb	97	39.286	ENSSSCG00000013522	SAFB	89	38.643	Sus_scrofa
ENSHCOG00000001705	safb	96	37.456	ENSTGUG00000000502	-	89	40.099	Taeniopygia_guttata
ENSHCOG00000001705	safb	64	40.036	ENSTGUG00000000489	-	92	45.320	Taeniopygia_guttata
ENSHCOG00000001705	safb	99	64.424	ENSTRUG00000003567	safb	94	64.470	Takifugu_rubripes
ENSHCOG00000001705	safb	93	58.127	ENSTNIG00000015470	safb	96	57.477	Tetraodon_nigroviridis
ENSHCOG00000001705	safb	65	47.578	ENSTTRG00000013588	SAFB	52	45.968	Tursiops_truncatus
ENSHCOG00000001705	safb	75	40.000	ENSUMAG00000009734	SAFB	79	38.532	Ursus_maritimus
ENSHCOG00000001705	safb	67	37.050	ENSVVUG00000013720	SAFB	79	37.199	Vulpes_vulpes
ENSHCOG00000001705	safb	99	61.961	ENSXMAG00000003458	safb	93	61.749	Xiphophorus_maculatus