EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001809 (Gene tree)
Gene ID: 109510573
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10373 bases
Position: chrKV880531.1:838229-848601
Accession: 109510573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000000926	PC4	PF02229.16	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012967	-	1325	XM_019860963	ENSHCOP00000000926	125 (aa)	XP_019716522	UPI00094F0C09

Gene Model

Click here to download ENSHCOG00000001809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001809	sub1b	100	65.354	ENSG00000113387	SUB1	100	70.866	Homo_sapiens
ENSHCOG00000001809	sub1b	100	84.000	ENSAPOG00000005917	SUB1	100	84.000	Acanthochromis_polyacanthus
ENSHCOG00000001809	sub1b	100	64.567	ENSAMEG00000006238	SUB1	95	70.079	Ailuropoda_melanoleuca
ENSHCOG00000001809	sub1b	100	88.800	ENSACIG00000015976	sub1b	100	88.800	Amphilophus_citrinellus
ENSHCOG00000001809	sub1b	82	76.699	ENSAOCG00000002323	-	80	78.351	Amphiprion_ocellaris
ENSHCOG00000001809	sub1b	96	79.167	ENSAOCG00000007313	-	83	88.235	Amphiprion_ocellaris
ENSHCOG00000001809	sub1b	100	88.000	ENSAPEG00000024347	sub1b	100	88.000	Amphiprion_percula
ENSHCOG00000001809	sub1b	52	78.462	ENSAPEG00000014618	-	62	78.462	Amphiprion_percula
ENSHCOG00000001809	sub1b	82	78.431	ENSAPEG00000017151	-	76	79.381	Amphiprion_percula
ENSHCOG00000001809	sub1b	100	86.400	ENSATEG00000010340	sub1b	100	86.400	Anabas_testudineus
ENSHCOG00000001809	sub1b	100	60.902	ENSACAG00000007974	SUB1	76	70.297	Anolis_carolinensis
ENSHCOG00000001809	sub1b	100	65.873	ENSANAG00000023392	-	83	69.841	Aotus_nancymaae
ENSHCOG00000001809	sub1b	100	65.354	ENSANAG00000011651	-	100	70.866	Aotus_nancymaae
ENSHCOG00000001809	sub1b	100	88.800	ENSACLG00000016875	sub1b	64	88.800	Astatotilapia_calliptera
ENSHCOG00000001809	sub1b	100	77.778	ENSAMXG00000037104	sub1b	100	77.778	Astyanax_mexicanus
ENSHCOG00000001809	sub1b	100	64.567	ENSBTAG00000021965	SUB1	100	70.079	Bos_taurus
ENSHCOG00000001809	sub1b	69	43.678	WBGene00011743	T13F2.2	80	43.689	Caenorhabditis_elegans
ENSHCOG00000001809	sub1b	80	63.725	ENSCJAG00000018718	SUB1	98	70.588	Callithrix_jacchus
ENSHCOG00000001809	sub1b	100	64.567	ENSCAFG00000016713	-	96	70.079	Canis_familiaris
ENSHCOG00000001809	sub1b	100	63.200	ENSCAFG00000024488	-	100	63.200	Canis_familiaris
ENSHCOG00000001809	sub1b	100	64.567	ENSCAFG00000018879	-	88	70.079	Canis_familiaris
ENSHCOG00000001809	sub1b	100	64.567	ENSCAFG00020016840	-	100	70.079	Canis_lupus_dingo
ENSHCOG00000001809	sub1b	100	64.062	ENSCAFG00020011479	-	77	69.531	Canis_lupus_dingo
ENSHCOG00000001809	sub1b	100	65.354	ENSCHIG00000008460	SUB1	100	70.866	Capra_hircus
ENSHCOG00000001809	sub1b	100	60.769	ENSTSYG00000014069	-	93	66.154	Carlito_syrichta
ENSHCOG00000001809	sub1b	100	58.268	ENSTSYG00000035366	-	83	63.780	Carlito_syrichta
ENSHCOG00000001809	sub1b	100	65.354	ENSTSYG00000029948	-	100	70.866	Carlito_syrichta
ENSHCOG00000001809	sub1b	100	65.354	ENSCPOG00000031334	SUB1	100	70.866	Cavia_porcellus
ENSHCOG00000001809	sub1b	100	62.992	ENSCCAG00000020604	-	100	65.354	Cebus_capucinus
ENSHCOG00000001809	sub1b	100	59.524	ENSCCAG00000017043	-	93	63.492	Cebus_capucinus
ENSHCOG00000001809	sub1b	100	65.354	ENSCCAG00000033751	-	95	70.866	Cebus_capucinus
ENSHCOG00000001809	sub1b	100	65.354	ENSCCAG00000023605	-	100	70.866	Cebus_capucinus
ENSHCOG00000001809	sub1b	100	65.354	ENSCATG00000031199	SUB1	100	70.866	Cercocebus_atys
ENSHCOG00000001809	sub1b	100	64.062	ENSCLAG00000007522	SUB1	100	70.312	Chinchilla_lanigera
ENSHCOG00000001809	sub1b	100	65.354	ENSCSAG00000017172	-	100	70.866	Chlorocebus_sabaeus
ENSHCOG00000001809	sub1b	100	65.354	ENSCSAG00000019449	-	100	68.504	Chlorocebus_sabaeus
ENSHCOG00000001809	sub1b	100	69.048	ENSCPBG00000024218	SUB1	79	69.841	Chrysemys_picta_bellii
ENSHCOG00000001809	sub1b	100	65.354	ENSCANG00000029372	SUB1	100	70.866	Colobus_angolensis_palliatus
ENSHCOG00000001809	sub1b	100	55.556	ENSCANG00000028665	-	90	59.524	Colobus_angolensis_palliatus
ENSHCOG00000001809	sub1b	100	62.205	ENSCGRG00001003473	-	100	67.717	Cricetulus_griseus_chok1gshd
ENSHCOG00000001809	sub1b	100	52.381	ENSCGRG00001014660	-	100	52.381	Cricetulus_griseus_chok1gshd
ENSHCOG00000001809	sub1b	64	56.322	ENSCGRG00001016254	-	100	50.000	Cricetulus_griseus_chok1gshd
ENSHCOG00000001809	sub1b	100	48.120	ENSCGRG00000001489	-	100	57.143	Cricetulus_griseus_crigri
ENSHCOG00000001809	sub1b	100	62.205	ENSCGRG00000001133	-	100	67.717	Cricetulus_griseus_crigri
ENSHCOG00000001809	sub1b	100	52.381	ENSCGRG00000019368	-	100	52.381	Cricetulus_griseus_crigri
ENSHCOG00000001809	sub1b	98	76.423	ENSDARG00000053446	sub1a	98	77.236	Danio_rerio
ENSHCOG00000001809	sub1b	98	75.610	ENSDARG00000007720	sub1b	98	75.610	Danio_rerio
ENSHCOG00000001809	sub1b	100	62.205	ENSDNOG00000032396	-	100	67.717	Dasypus_novemcinctus
ENSHCOG00000001809	sub1b	100	62.992	ENSDNOG00000040794	-	100	68.504	Dasypus_novemcinctus
ENSHCOG00000001809	sub1b	100	63.780	ENSDORG00000013916	Sub1	100	69.291	Dipodomys_ordii
ENSHCOG00000001809	sub1b	79	53.398	ENSEBUG00000008746	sub1a	53	53.398	Eptatretus_burgeri
ENSHCOG00000001809	sub1b	100	65.354	ENSEASG00005007099	SUB1	100	70.866	Equus_asinus_asinus
ENSHCOG00000001809	sub1b	100	65.354	ENSECAG00000012399	SUB1	100	70.866	Equus_caballus
ENSHCOG00000001809	sub1b	80	66.337	ENSEEUG00000000436	SUB1	99	68.317	Erinaceus_europaeus
ENSHCOG00000001809	sub1b	100	64.567	ENSFCAG00000037288	SUB1	100	70.079	Felis_catus
ENSHCOG00000001809	sub1b	100	68.254	ENSFALG00000002143	SUB1	87	69.048	Ficedula_albicollis
ENSHCOG00000001809	sub1b	100	65.354	ENSFDAG00000017179	SUB1	100	70.866	Fukomys_damarensis
ENSHCOG00000001809	sub1b	100	69.841	ENSGALG00000003248	SUB1	100	70.635	Gallus_gallus
ENSHCOG00000001809	sub1b	100	45.238	ENSGALG00000027147	-	100	45.238	Gallus_gallus
ENSHCOG00000001809	sub1b	100	66.667	ENSGALG00000034905	-	100	67.460	Gallus_gallus
ENSHCOG00000001809	sub1b	100	84.800	ENSGACG00000003912	sub1b	100	84.800	Gasterosteus_aculeatus
ENSHCOG00000001809	sub1b	100	69.841	ENSGAGG00000013535	SUB1	100	70.635	Gopherus_agassizii
ENSHCOG00000001809	sub1b	100	65.354	ENSGGOG00000040900	SUB1	100	70.866	Gorilla_gorilla
ENSHCOG00000001809	sub1b	99	77.419	ENSHBUG00000013953	sub1b	93	77.419	Haplochromis_burtoni
ENSHCOG00000001809	sub1b	100	65.354	ENSHGLG00000006749	SUB1	100	70.866	Heterocephalus_glaber_female
ENSHCOG00000001809	sub1b	100	65.354	ENSHGLG00100014344	SUB1	100	70.866	Heterocephalus_glaber_male
ENSHCOG00000001809	sub1b	100	70.312	ENSIPUG00000024367	SUB1	100	70.312	Ictalurus_punctatus
ENSHCOG00000001809	sub1b	100	76.800	ENSIPUG00000008166	sub1	100	76.800	Ictalurus_punctatus
ENSHCOG00000001809	sub1b	100	66.142	ENSSTOG00000019364	SUB1	100	71.654	Ictidomys_tridecemlineatus
ENSHCOG00000001809	sub1b	100	63.780	ENSJJAG00000018885	Sub1	100	67.717	Jaculus_jaculus
ENSHCOG00000001809	sub1b	98	83.740	ENSLBEG00000010728	sub1b	98	83.740	Labrus_bergylta
ENSHCOG00000001809	sub1b	52	76.923	ENSLACG00000001068	SUB1	100	76.923	Latimeria_chalumnae
ENSHCOG00000001809	sub1b	100	73.600	ENSLOCG00000006692	sub1b	100	73.600	Lepisosteus_oculatus
ENSHCOG00000001809	sub1b	100	65.354	ENSLAFG00000011006	-	100	69.291	Loxodonta_africana
ENSHCOG00000001809	sub1b	100	65.354	ENSLAFG00000032088	-	100	69.291	Loxodonta_africana
ENSHCOG00000001809	sub1b	100	57.480	ENSMFAG00000045643	-	61	62.205	Macaca_fascicularis
ENSHCOG00000001809	sub1b	100	65.354	ENSMFAG00000040728	SUB1	100	70.866	Macaca_fascicularis
ENSHCOG00000001809	sub1b	100	65.354	ENSMMUG00000046181	SUB1	100	70.866	Macaca_mulatta
ENSHCOG00000001809	sub1b	100	65.354	ENSMNEG00000037046	SUB1	100	70.866	Macaca_nemestrina
ENSHCOG00000001809	sub1b	100	63.780	ENSMLEG00000030509	-	94	68.504	Mandrillus_leucophaeus
ENSHCOG00000001809	sub1b	100	54.762	ENSMLEG00000043436	-	90	60.317	Mandrillus_leucophaeus
ENSHCOG00000001809	sub1b	100	65.354	ENSMLEG00000037017	-	100	70.866	Mandrillus_leucophaeus
ENSHCOG00000001809	sub1b	100	88.800	ENSMAMG00000018428	sub1b	100	88.800	Mastacembelus_armatus
ENSHCOG00000001809	sub1b	100	88.800	ENSMZEG00005021252	sub1b	100	88.800	Maylandia_zebra
ENSHCOG00000001809	sub1b	100	69.841	ENSMGAG00000002906	SUB1	100	70.635	Meleagris_gallopavo
ENSHCOG00000001809	sub1b	98	47.200	ENSMGAG00000001200	-	79	49.057	Meleagris_gallopavo
ENSHCOG00000001809	sub1b	100	62.205	ENSMAUG00000020232	Sub1	100	67.717	Mesocricetus_auratus
ENSHCOG00000001809	sub1b	100	65.354	ENSMICG00000014535	SUB1	100	70.866	Microcebus_murinus
ENSHCOG00000001809	sub1b	100	61.417	ENSMOCG00000018930	-	100	66.929	Microtus_ochrogaster
ENSHCOG00000001809	sub1b	100	55.556	ENSMOCG00000016424	-	100	55.556	Microtus_ochrogaster
ENSHCOG00000001809	sub1b	83	72.115	ENSMODG00000020410	SUB1	75	72.115	Monodelphis_domestica
ENSHCOG00000001809	sub1b	100	87.200	ENSMALG00000007163	sub1b	81	87.200	Monopterus_albus
ENSHCOG00000001809	sub1b	100	62.205	MGP_CAROLIEiJ_G0019676	Sub1	100	67.717	Mus_caroli
ENSHCOG00000001809	sub1b	100	62.205	ENSMUSG00000022205	Sub1	100	67.717	Mus_musculus
ENSHCOG00000001809	sub1b	100	61.417	MGP_PahariEiJ_G0016056	Sub1	100	66.929	Mus_pahari
ENSHCOG00000001809	sub1b	100	62.205	MGP_SPRETEiJ_G0020573	Sub1	100	67.717	Mus_spretus
ENSHCOG00000001809	sub1b	100	63.780	ENSMPUG00000018418	-	100	69.291	Mustela_putorius_furo
ENSHCOG00000001809	sub1b	100	64.567	ENSMPUG00000015185	-	100	70.079	Mustela_putorius_furo
ENSHCOG00000001809	sub1b	100	63.780	ENSMLUG00000013685	-	95	69.291	Myotis_lucifugus
ENSHCOG00000001809	sub1b	100	62.992	ENSMLUG00000009236	-	95	66.929	Myotis_lucifugus
ENSHCOG00000001809	sub1b	100	57.937	ENSNGAG00000017212	-	100	56.800	Nannospalax_galili
ENSHCOG00000001809	sub1b	100	62.992	ENSNGAG00000014072	-	100	68.504	Nannospalax_galili
ENSHCOG00000001809	sub1b	100	62.698	ENSNGAG00000010782	-	84	65.873	Nannospalax_galili
ENSHCOG00000001809	sub1b	83	87.500	ENSNBRG00000008451	sub1b	84	88.350	Neolamprologus_brichardi
ENSHCOG00000001809	sub1b	100	66.142	ENSNLEG00000018383	-	95	71.654	Nomascus_leucogenys
ENSHCOG00000001809	sub1b	100	64.567	ENSNLEG00000036068	SUB1	100	70.079	Nomascus_leucogenys
ENSHCOG00000001809	sub1b	100	64.286	ENSNLEG00000035968	-	100	67.460	Nomascus_leucogenys
ENSHCOG00000001809	sub1b	100	66.667	ENSMEUG00000007770	SUB1	100	70.635	Notamacropus_eugenii
ENSHCOG00000001809	sub1b	100	62.992	ENSOPRG00000012887	SUB1	100	68.504	Ochotona_princeps
ENSHCOG00000001809	sub1b	86	65.741	ENSODEG00000015114	-	86	68.224	Octodon_degus
ENSHCOG00000001809	sub1b	100	65.354	ENSODEG00000001937	-	100	70.866	Octodon_degus
ENSHCOG00000001809	sub1b	100	62.992	ENSODEG00000014558	-	71	68.224	Octodon_degus
ENSHCOG00000001809	sub1b	100	68.254	ENSOANG00000002328	SUB1	95	72.222	Ornithorhynchus_anatinus
ENSHCOG00000001809	sub1b	100	62.992	ENSOCUG00000006262	SUB1	60	68.504	Oryctolagus_cuniculus
ENSHCOG00000001809	sub1b	100	65.354	ENSOGAG00000009012	-	100	70.866	Otolemur_garnettii
ENSHCOG00000001809	sub1b	98	66.129	ENSOGAG00000000337	-	100	71.774	Otolemur_garnettii
ENSHCOG00000001809	sub1b	100	65.354	ENSOARG00000012154	SUB1	100	70.866	Ovis_aries
ENSHCOG00000001809	sub1b	100	65.354	ENSPPAG00000011212	SUB1	100	70.866	Pan_paniscus
ENSHCOG00000001809	sub1b	100	64.567	ENSPPRG00000008557	SUB1	100	70.079	Panthera_pardus
ENSHCOG00000001809	sub1b	100	64.567	ENSPTIG00000009466	SUB1	100	70.079	Panthera_tigris_altaica
ENSHCOG00000001809	sub1b	100	59.843	ENSPTRG00000041644	-	100	66.142	Pan_troglodytes
ENSHCOG00000001809	sub1b	100	65.354	ENSPTRG00000048895	SUB1	100	70.866	Pan_troglodytes
ENSHCOG00000001809	sub1b	100	57.937	ENSPANG00000033272	-	90	58.730	Papio_anubis
ENSHCOG00000001809	sub1b	100	65.354	ENSPANG00000000339	-	97	70.866	Papio_anubis
ENSHCOG00000001809	sub1b	100	65.354	ENSPANG00000002644	-	95	70.866	Papio_anubis
ENSHCOG00000001809	sub1b	100	65.079	ENSPANG00000035601	-	100	65.079	Papio_anubis
ENSHCOG00000001809	sub1b	100	63.780	ENSPANG00000000672	-	91	68.504	Papio_anubis
ENSHCOG00000001809	sub1b	100	72.800	ENSPKIG00000016923	sub1b	100	72.800	Paramormyrops_kingsleyae
ENSHCOG00000001809	sub1b	100	68.254	ENSPSIG00000005731	SUB1	95	69.048	Pelodiscus_sinensis
ENSHCOG00000001809	sub1b	100	65.079	ENSPCIG00000020827	-	100	67.460	Phascolarctos_cinereus
ENSHCOG00000001809	sub1b	100	66.667	ENSPCIG00000020907	-	100	70.635	Phascolarctos_cinereus
ENSHCOG00000001809	sub1b	100	62.205	ENSPPYG00000018347	-	100	68.504	Pongo_abelii
ENSHCOG00000001809	sub1b	100	65.354	ENSPPYG00000015379	SUB1	100	70.866	Pongo_abelii
ENSHCOG00000001809	sub1b	100	65.354	ENSPCOG00000014391	SUB1	100	70.866	Propithecus_coquereli
ENSHCOG00000001809	sub1b	100	64.567	ENSPVAG00000004785	SUB1	100	70.079	Pteropus_vampyrus
ENSHCOG00000001809	sub1b	100	88.800	ENSPNYG00000010975	sub1b	100	88.800	Pundamilia_nyererei
ENSHCOG00000001809	sub1b	98	76.423	ENSPNAG00000005998	sub1b	98	76.423	Pygocentrus_nattereri
ENSHCOG00000001809	sub1b	100	71.429	ENSPNAG00000008693	sub1a	100	72.222	Pygocentrus_nattereri
ENSHCOG00000001809	sub1b	100	62.992	ENSRNOG00000050563	Sub1	100	68.504	Rattus_norvegicus
ENSHCOG00000001809	sub1b	100	61.905	ENSRBIG00000031233	SUB1	100	63.492	Rhinopithecus_bieti
ENSHCOG00000001809	sub1b	100	65.354	ENSRROG00000040438	SUB1	100	70.866	Rhinopithecus_roxellana
ENSHCOG00000001809	sub1b	100	61.111	ENSRROG00000042718	-	90	65.079	Rhinopithecus_roxellana
ENSHCOG00000001809	sub1b	100	65.354	ENSSBOG00000026994	SUB1	100	70.866	Saimiri_boliviensis_boliviensis
ENSHCOG00000001809	sub1b	100	66.667	ENSSHAG00000014986	SUB1	100	70.635	Sarcophilus_harrisii
ENSHCOG00000001809	sub1b	100	71.200	ENSSFOG00015017283	sub1b	100	71.200	Scleropages_formosus
ENSHCOG00000001809	sub1b	100	69.291	ENSSFOG00015018386	sub1b	100	75.591	Scleropages_formosus
ENSHCOG00000001809	sub1b	100	85.600	ENSSMAG00000000313	sub1b	100	85.600	Scophthalmus_maximus
ENSHCOG00000001809	sub1b	100	89.600	ENSSDUG00000013854	sub1b	76	89.600	Seriola_dumerili
ENSHCOG00000001809	sub1b	100	89.600	ENSSLDG00000000852	sub1b	100	89.600	Seriola_lalandi_dorsalis
ENSHCOG00000001809	sub1b	100	68.254	ENSSPUG00000016817	SUB1	100	69.048	Sphenodon_punctatus
ENSHCOG00000001809	sub1b	100	88.000	ENSSPAG00000019363	sub1b	100	88.000	Stegastes_partitus
ENSHCOG00000001809	sub1b	100	65.354	ENSSSCG00000040294	-	87	70.866	Sus_scrofa
ENSHCOG00000001809	sub1b	100	65.354	ENSSSCG00000032650	-	100	70.866	Sus_scrofa
ENSHCOG00000001809	sub1b	100	67.460	ENSTGUG00000001918	SUB1	100	68.254	Taeniopygia_guttata
ENSHCOG00000001809	sub1b	100	84.800	ENSTRUG00000024420	sub1b	100	84.800	Takifugu_rubripes
ENSHCOG00000001809	sub1b	100	84.800	ENSTNIG00000002700	sub1b	100	84.800	Tetraodon_nigroviridis
ENSHCOG00000001809	sub1b	86	67.593	ENSTBEG00000011247	-	84	70.093	Tupaia_belangeri
ENSHCOG00000001809	sub1b	100	64.567	ENSTBEG00000006504	-	100	70.079	Tupaia_belangeri
ENSHCOG00000001809	sub1b	100	64.567	ENSTBEG00000001790	-	100	65.354	Tupaia_belangeri
ENSHCOG00000001809	sub1b	100	66.929	ENSTBEG00000012861	-	100	66.142	Tupaia_belangeri
ENSHCOG00000001809	sub1b	100	64.567	ENSTBEG00000004053	-	100	70.079	Tupaia_belangeri
ENSHCOG00000001809	sub1b	98	60.800	ENSTBEG00000015821	-	99	66.400	Tupaia_belangeri
ENSHCOG00000001809	sub1b	81	70.588	ENSTTRG00000017324	SUB1	99	72.549	Tursiops_truncatus
ENSHCOG00000001809	sub1b	100	64.567	ENSUAMG00000000182	SUB1	100	70.079	Ursus_americanus
ENSHCOG00000001809	sub1b	100	64.567	ENSUMAG00000013792	SUB1	100	70.079	Ursus_maritimus
ENSHCOG00000001809	sub1b	100	60.317	ENSVPAG00000011012	SUB1	100	64.286	Vicugna_pacos
ENSHCOG00000001809	sub1b	100	64.567	ENSVVUG00000022166	-	100	70.079	Vulpes_vulpes
ENSHCOG00000001809	sub1b	89	59.292	ENSVVUG00000025193	-	95	65.487	Vulpes_vulpes
ENSHCOG00000001809	sub1b	100	64.062	ENSXETG00000027218	sub1	100	67.969	Xenopus_tropicalis