EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000001838 (Gene tree)
Gene ID: -
Gene Symbol: zgc:163098
Alias: -
Full Name: zgc:163098
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4035 bases
Position: chrKV880017.1:437663-441697
Accession: ZDB-GENE-070410-141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017777	RRM_1	PF00076.22	4.8e-11	1	1
ENSHCOP00000017777	Surp	PF01805.20	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012934	-	1170	-	ENSHCOP00000017777	389 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000001838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000001838	zgc:163098	77	52.149	ENSG00000163714	U2SURP	73	48.438	Homo_sapiens
ENSHCOG00000001838	zgc:163098	92	59.948	ENSAMXG00000005081	zgc:163098	88	67.913	Astyanax_mexicanus
ENSHCOG00000001838	zgc:163098	60	48.754	ENSBTAG00000009154	U2SURP	66	48.754	Bos_taurus
ENSHCOG00000001838	zgc:163098	77	52.149	ENSCAFG00020010497	U2SURP	71	48.754	Canis_lupus_dingo
ENSHCOG00000001838	zgc:163098	77	52.149	ENSTSYG00000008889	U2SURP	71	45.875	Carlito_syrichta
ENSHCOG00000001838	zgc:163098	77	52.149	ENSCCAG00000032530	U2SURP	69	48.754	Cebus_capucinus
ENSHCOG00000001838	zgc:163098	85	68.272	ENSDARG00000078911	zgc:163098	95	69.318	Danio_rerio
ENSHCOG00000001838	zgc:163098	81	53.867	ENSDARG00000061490	u2surp	81	53.017	Danio_rerio
ENSHCOG00000001838	zgc:163098	64	45.367	ENSDORG00000005201	-	73	45.367	Dipodomys_ordii
ENSHCOG00000001838	zgc:163098	77	52.436	ENSGALG00000002612	U2SURP	62	49.110	Gallus_gallus
ENSHCOG00000001838	zgc:163098	84	69.789	ENSGAFG00000003687	-	100	70.997	Gambusia_affinis
ENSHCOG00000001838	zgc:163098	77	52.299	ENSGGOG00000005563	U2SURP	66	48.754	Gorilla_gorilla
ENSHCOG00000001838	zgc:163098	77	52.149	ENSMMUG00000002775	U2SURP	66	48.754	Macaca_mulatta
ENSHCOG00000001838	zgc:163098	60	47.719	ENSMAUG00000009255	-	66	47.719	Mesocricetus_auratus
ENSHCOG00000001838	zgc:163098	77	51.275	MGP_CAROLIEiJ_G0032530	-	66	47.719	Mus_caroli
ENSHCOG00000001838	zgc:163098	77	51.275	ENSMUSG00000032407	U2surp	66	47.719	Mus_musculus
ENSHCOG00000001838	zgc:163098	77	51.275	MGP_PahariEiJ_G0015398	U2surp	66	47.719	Mus_pahari
ENSHCOG00000001838	zgc:163098	77	51.275	MGP_SPRETEiJ_G0033672	U2surp	66	47.719	Mus_spretus
ENSHCOG00000001838	zgc:163098	81	48.108	ENSNBRG00000017162	u2surp	85	47.319	Neolamprologus_brichardi
ENSHCOG00000001838	zgc:163098	88	50.750	ENSOMEG00000004962	u2surp	92	53.097	Oryzias_melastigma
ENSHCOG00000001838	zgc:163098	60	48.754	ENSPPAG00000027945	-	69	48.754	Pan_paniscus
ENSHCOG00000001838	zgc:163098	77	52.149	ENSPTRG00000015489	U2SURP	66	48.754	Pan_troglodytes
ENSHCOG00000001838	zgc:163098	81	54.360	ENSPMGG00000001808	u2surp	87	55.763	Periophthalmus_magnuspinnatus
ENSHCOG00000001838	zgc:163098	67	83.544	ENSPMGG00000008623	zgc:163098	100	83.544	Periophthalmus_magnuspinnatus
ENSHCOG00000001838	zgc:163098	85	67.898	ENSSFOG00015004962	zgc:163098	84	67.302	Scleropages_formosus
ENSHCOG00000001838	zgc:163098	85	76.045	ENSSLDG00000020364	zgc:163098	98	75.900	Seriola_lalandi_dorsalis
ENSHCOG00000001838	zgc:163098	77	52.149	ENSUAMG00000028259	U2SURP	71	48.754	Ursus_americanus