EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000001863 (Gene tree)
Gene ID
-
Gene Symbol
RBFOX3 (1 of many)
Alias
rbfox3
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
31494 bases
Position
chrKV879858.1:349217-380710
Accession
27097
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000000962Fox-1_CPF12414.82.4e-2112
ENSHCOP00000000962Fox-1_CPF12414.82.4e-2122
ENSHCOP00000000962RRM_1PF00076.221.9e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000012904RBFOX3 (1 of many)-201930-ENSHCOP00000000962309 (aa)--
Gene Model
Click here to download ENSHCOG00000001863's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000001863's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000001863RBFOX38949.853ENSHCOG00000005662-7249.857
ENSHCOG00000001863RBFOX39067.638ENSHCOG00000007444RBFOX37867.550
ENSHCOG00000001863RBFOX39362.461ENSHCOG00000016419rbfox19262.461
ENSHCOG00000001863RBFOX36460.484ENSHCOG00000016102rbfox26056.631
ENSHCOG00000001863RBFOX36465.106ENSHCOG00000020771rbfox1l8254.605
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000001863RBFOX38089.655ENSG00000167281RBFOX310070.253Homo_sapiens
ENSHCOG00000001863RBFOX39374.448ENSAPOG00000021630rbfox3b8574.038Acanthochromis_polyacanthus
ENSHCOG00000001863RBFOX38975.085ENSAPOG00000015658-8277.491Acanthochromis_polyacanthus
ENSHCOG00000001863RBFOX38864.375ENSAMEG00000014170RBFOX38566.071Ailuropoda_melanoleuca
ENSHCOG00000001863RBFOX39378.548ENSACIG00000010817rbfox3b10077.558Amphilophus_citrinellus
ENSHCOG00000001863RBFOX39468.882ENSACIG00000003768-8772.816Amphilophus_citrinellus
ENSHCOG00000001863RBFOX39082.653ENSAOCG00000010786-8583.172Amphiprion_ocellaris
ENSHCOG00000001863RBFOX39274.841ENSAOCG00000012358rbfox3b8574.038Amphiprion_ocellaris
ENSHCOG00000001863RBFOX38778.033ENSAPEG00000015891-8378.750Amphiprion_percula
ENSHCOG00000001863RBFOX39379.592ENSAPEG00000019081rbfox3b8579.522Amphiprion_percula
ENSHCOG00000001863RBFOX39369.452ENSATEG00000019945rbfox3b10068.588Anabas_testudineus
ENSHCOG00000001863RBFOX39074.183ENSATEG00000023101-9875.078Anabas_testudineus
ENSHCOG00000001863RBFOX38869.667ENSACAG00000016093RBFOX38770.064Anolis_carolinensis
ENSHCOG00000001863RBFOX38190.000ENSANAG00000023457RBFOX310069.649Aotus_nancymaae
ENSHCOG00000001863RBFOX39374.841ENSACLG00000020011rbfox3b10074.920Astatotilapia_calliptera
ENSHCOG00000001863RBFOX39279.618ENSACLG00000025552-8679.618Astatotilapia_calliptera
ENSHCOG00000001863RBFOX39272.381ENSAMXG00000042841rbfox3b8971.429Astyanax_mexicanus
ENSHCOG00000001863RBFOX38974.267ENSAMXG00000037246rbfox3a9075.828Astyanax_mexicanus
ENSHCOG00000001863RBFOX38089.655ENSBTAG00000006280RBFOX36478.423Bos_taurus
ENSHCOG00000001863RBFOX38190.000ENSCJAG00000009563RBFOX37888.636Callithrix_jacchus
ENSHCOG00000001863RBFOX37372.510ENSCAFG00000005547RBFOX38676.230Canis_familiaris
ENSHCOG00000001863RBFOX38190.000ENSCAFG00020008126RBFOX37685.106Canis_lupus_dingo
ENSHCOG00000001863RBFOX38190.000ENSCHIG00000009124RBFOX37685.106Capra_hircus
ENSHCOG00000001863RBFOX38089.655ENSTSYG00000029617RBFOX37890.909Carlito_syrichta
ENSHCOG00000001863RBFOX38584.783ENSCPOG00000021703RBFOX37880.435Cavia_porcellus
ENSHCOG00000001863RBFOX38190.000ENSCCAG00000028450RBFOX310069.649Cebus_capucinus
ENSHCOG00000001863RBFOX38088.889ENSCATG00000018349RBFOX310070.253Cercocebus_atys
ENSHCOG00000001863RBFOX38588.636ENSCLAG00000006449RBFOX37888.636Chinchilla_lanigera
ENSHCOG00000001863RBFOX38767.003ENSCSAG00000002355RBFOX310070.253Chlorocebus_sabaeus
ENSHCOG00000001863RBFOX38869.435ENSCPBG00000010904RBFOX310070.794Chrysemys_picta_bellii
ENSHCOG00000001863RBFOX38190.000ENSCANG00000043120RBFOX310070.253Colobus_angolensis_palliatus
ENSHCOG00000001863RBFOX38082.759ENSCGRG00001019476Rbfox37882.222Cricetulus_griseus_chok1gshd
ENSHCOG00000001863RBFOX38082.759ENSCGRG00000003268Rbfox37882.222Cricetulus_griseus_crigri
ENSHCOG00000001863RBFOX39380.263ENSCSEG00000015567RBFOX39080.564Cynoglossus_semilaevis
ENSHCOG00000001863RBFOX39361.514ENSCSEG00000020606RBFOX38761.538Cynoglossus_semilaevis
ENSHCOG00000001863RBFOX39274.841ENSCVAG00000006882rbfox3b8574.038Cyprinodon_variegatus
ENSHCOG00000001863RBFOX38775.166ENSDARG00000010083rbfox3a9176.821Danio_rerio
ENSHCOG00000001863RBFOX39469.205ENSDARG00000074310rbfox3b9369.338Danio_rerio
ENSHCOG00000001863RBFOX37089.655ENSDNOG00000039391RBFOX35688.636Dasypus_novemcinctus
ENSHCOG00000001863RBFOX38586.364ENSDORG00000005352Rbfox37581.818Dipodomys_ordii
ENSHCOG00000001863RBFOX37658.065ENSEBUG00000013559RBFOX36359.825Eptatretus_burgeri
ENSHCOG00000001863RBFOX39360.725ENSEBUG00000002129RBFOX39362.538Eptatretus_burgeri
ENSHCOG00000001863RBFOX38767.219ENSEASG00005005059RBFOX310070.978Equus_asinus_asinus
ENSHCOG00000001863RBFOX38866.997ENSECAG00000023811RBFOX310070.662Equus_caballus
ENSHCOG00000001863RBFOX37681.250ENSEEUG00000013974RBFOX36882.979Erinaceus_europaeus
ENSHCOG00000001863RBFOX39374.132ENSELUG00000017963rbfox3b10064.650Esox_lucius
ENSHCOG00000001863RBFOX35173.418ENSELUG00000009807-5068.000Esox_lucius
ENSHCOG00000001863RBFOX38082.759ENSFCAG00000002555RBFOX310069.329Felis_catus
ENSHCOG00000001863RBFOX38755.490ENSFALG00000012288RBFOX38556.447Ficedula_albicollis
ENSHCOG00000001863RBFOX38584.783ENSFDAG00000007489RBFOX37780.435Fukomys_damarensis
ENSHCOG00000001863RBFOX39265.924ENSFHEG00000008550rbfox3b10065.064Fundulus_heteroclitus
ENSHCOG00000001863RBFOX39285.106ENSGMOG00000019304-7485.106Gadus_morhua
ENSHCOG00000001863RBFOX38868.771ENSGALG00000032889RBFOX38771.111Gallus_gallus
ENSHCOG00000001863RBFOX39375.578ENSGAFG00000005025rbfox3b8377.083Gambusia_affinis
ENSHCOG00000001863RBFOX38691.489ENSGACG00000002138-7691.489Gasterosteus_aculeatus
ENSHCOG00000001863RBFOX38869.435ENSGAGG00000020025RBFOX310070.794Gopherus_agassizii
ENSHCOG00000001863RBFOX38190.000ENSGGOG00000012546RBFOX310070.253Gorilla_gorilla
ENSHCOG00000001863RBFOX39378.864ENSHBUG00000023098-9178.864Haplochromis_burtoni
ENSHCOG00000001863RBFOX39374.841ENSHBUG00000018099rbfox3b8575.081Haplochromis_burtoni
ENSHCOG00000001863RBFOX38581.250ENSHGLG00000008679RBFOX37979.167Heterocephalus_glaber_female
ENSHCOG00000001863RBFOX38575.000ENSHGLG00100014739RBFOX37182.759Heterocephalus_glaber_male
ENSHCOG00000001863RBFOX39362.952ENSIPUG00000021966rbfox3b8975.732Ictalurus_punctatus
ENSHCOG00000001863RBFOX38974.823ENSIPUG00000012010rbfox3a9074.172Ictalurus_punctatus
ENSHCOG00000001863RBFOX38861.806ENSSTOG00000026817RBFOX310063.333Ictidomys_tridecemlineatus
ENSHCOG00000001863RBFOX38089.655ENSJJAG00000014167Rbfox37888.636Jaculus_jaculus
ENSHCOG00000001863RBFOX39874.214ENSKMAG00000006726rbfox3b8875.472Kryptolebias_marmoratus
ENSHCOG00000001863RBFOX38780.602ENSLBEG00000022508-8681.210Labrus_bergylta
ENSHCOG00000001863RBFOX39378.878ENSLBEG00000004030rbfox3b10077.888Labrus_bergylta
ENSHCOG00000001863RBFOX38865.758ENSLACG00000018409-8866.762Latimeria_chalumnae
ENSHCOG00000001863RBFOX38776.333ENSLOCG00000012267rbfox3a9578.413Lepisosteus_oculatus
ENSHCOG00000001863RBFOX38184.375ENSLAFG00000016623RBFOX37687.234Loxodonta_africana
ENSHCOG00000001863RBFOX38089.655ENSMFAG00000002247RBFOX37888.636Macaca_fascicularis
ENSHCOG00000001863RBFOX38089.655ENSMMUG00000023028RBFOX310070.253Macaca_mulatta
ENSHCOG00000001863RBFOX38085.185ENSMNEG00000041147RBFOX310069.937Macaca_nemestrina
ENSHCOG00000001863RBFOX38183.333ENSMLEG00000025686RBFOX310070.253Mandrillus_leucophaeus
ENSHCOG00000001863RBFOX39377.419ENSMAMG00000020600-9378.154Mastacembelus_armatus
ENSHCOG00000001863RBFOX39375.503ENSMAMG00000019810rbfox3b10074.832Mastacembelus_armatus
ENSHCOG00000001863RBFOX39374.841ENSMZEG00005000781rbfox3b8575.081Maylandia_zebra
ENSHCOG00000001863RBFOX310065.982ENSMZEG00005003055-8766.366Maylandia_zebra
ENSHCOG00000001863RBFOX36175.773ENSMGAG00000005600RBFOX37375.773Meleagris_gallopavo
ENSHCOG00000001863RBFOX38581.818ENSMAUG00000013543Rbfox37881.818Mesocricetus_auratus
ENSHCOG00000001863RBFOX38590.000ENSMICG00000014898RBFOX39669.103Microcebus_murinus
ENSHCOG00000001863RBFOX38082.759ENSMOCG00000015373Rbfox37886.364Microtus_ochrogaster
ENSHCOG00000001863RBFOX39474.183ENSMMOG00000020193rbfox3b8574.183Mola_mola
ENSHCOG00000001863RBFOX38767.224ENSMODG00000002089RBFOX38769.841Monodelphis_domestica
ENSHCOG00000001863RBFOX39272.293ENSMALG00000020407rbfox3b8572.756Monopterus_albus
ENSHCOG00000001863RBFOX39381.908ENSMALG00000018270-9781.908Monopterus_albus
ENSHCOG00000001863RBFOX38082.759MGP_CAROLIEiJ_G0017487Rbfox38392.562Mus_caroli
ENSHCOG00000001863RBFOX38586.364ENSMUSG00000025576Rbfox38392.562Mus_musculus
ENSHCOG00000001863RBFOX38086.207MGP_PahariEiJ_G0018614Rbfox38393.388Mus_pahari
ENSHCOG00000001863RBFOX38086.207MGP_SPRETEiJ_G0018331Rbfox38392.562Mus_spretus
ENSHCOG00000001863RBFOX38961.290ENSMPUG00000012319RBFOX39263.202Mustela_putorius_furo
ENSHCOG00000001863RBFOX38086.207ENSNGAG00000018006Rbfox37888.636Nannospalax_galili
ENSHCOG00000001863RBFOX39879.935ENSNBRG00000022885-9179.935Neolamprologus_brichardi
ENSHCOG00000001863RBFOX39378.157ENSNBRG00000010102rbfox3b8477.740Neolamprologus_brichardi
ENSHCOG00000001863RBFOX39355.973ENSNLEG00000000153-9358.065Nomascus_leucogenys
ENSHCOG00000001863RBFOX38581.818ENSMEUG00000004218-7888.636Notamacropus_eugenii
ENSHCOG00000001863RBFOX36671.084ENSOPRG00000016279-6772.376Ochotona_princeps
ENSHCOG00000001863RBFOX38683.333ENSODEG00000009433RBFOX310070.886Octodon_degus
ENSHCOG00000001863RBFOX39279.618ENSONIG00000007282-9279.618Oreochromis_niloticus
ENSHCOG00000001863RBFOX39275.159ENSONIG00000009549rbfox3b7590.909Oreochromis_niloticus
ENSHCOG00000001863RBFOX35682.759ENSOCUG00000014217RBFOX35181.818Oryctolagus_cuniculus
ENSHCOG00000001863RBFOX39374.921ENSORLG00000000905rbfox3b6873.333Oryzias_latipes
ENSHCOG00000001863RBFOX39374.921ENSORLG00020018030rbfox3b8573.482Oryzias_latipes_hni
ENSHCOG00000001863RBFOX39374.603ENSORLG00015009200rbfox3b10069.625Oryzias_latipes_hsok
ENSHCOG00000001863RBFOX37676.744ENSOMEG00000014677rbfox3b7669.421Oryzias_melastigma
ENSHCOG00000001863RBFOX38766.330ENSOGAG00000029595RBFOX38469.010Otolemur_garnettii
ENSHCOG00000001863RBFOX35392.000ENSOARG00000002908RBFOX36958.736Ovis_aries
ENSHCOG00000001863RBFOX37177.333ENSPPAG00000025383RBFOX38377.178Pan_paniscus
ENSHCOG00000001863RBFOX38082.759ENSPPRG00000007819RBFOX38084.091Panthera_pardus
ENSHCOG00000001863RBFOX38190.000ENSPTRG00000009727RBFOX310070.253Pan_troglodytes
ENSHCOG00000001863RBFOX38088.889ENSPANG00000019837RBFOX310070.253Papio_anubis
ENSHCOG00000001863RBFOX39359.295ENSPKIG00000022633-8659.295Paramormyrops_kingsleyae
ENSHCOG00000001863RBFOX39376.052ENSPKIG00000010299rbfox3a8676.543Paramormyrops_kingsleyae
ENSHCOG00000001863RBFOX37779.583ENSPMGG00000008000rbfox3b7581.250Periophthalmus_magnuspinnatus
ENSHCOG00000001863RBFOX38082.759ENSPEMG00000010500Rbfox37886.364Peromyscus_maniculatus_bairdii
ENSHCOG00000001863RBFOX35059.067ENSPMAG00000008689rbfox3b9463.731Petromyzon_marinus
ENSHCOG00000001863RBFOX38582.222ENSPCIG00000005766RBFOX37888.636Phascolarctos_cinereus
ENSHCOG00000001863RBFOX39282.979ENSPFOG00000018294rbfox3b7190.909Poecilia_formosa
ENSHCOG00000001863RBFOX37284.188ENSPLAG00000000481rbfox3b7682.906Poecilia_latipinna
ENSHCOG00000001863RBFOX39265.605ENSPMEG00000022997rbfox3b10064.744Poecilia_mexicana
ENSHCOG00000001863RBFOX39375.079ENSPREG00000012886rbfox3b9074.441Poecilia_reticulata
ENSHCOG00000001863RBFOX37169.027ENSPPYG00000008704RBFOX36970.124Pongo_abelii
ENSHCOG00000001863RBFOX38082.759ENSPCAG00000001401RBFOX37886.364Procavia_capensis
ENSHCOG00000001863RBFOX38590.000ENSPCOG00000012689RBFOX37588.636Propithecus_coquereli
ENSHCOG00000001863RBFOX38082.759ENSPVAG00000015243RBFOX37982.222Pteropus_vampyrus
ENSHCOG00000001863RBFOX39483.498ENSPNYG00000009079-8483.498Pundamilia_nyererei
ENSHCOG00000001863RBFOX39378.157ENSPNYG00000010414rbfox3b8477.740Pundamilia_nyererei
ENSHCOG00000001863RBFOX39565.677ENSPNAG00000018173rbfox3b9365.017Pygocentrus_nattereri
ENSHCOG00000001863RBFOX38293.750ENSPNAG00000002889rbfox3a8176.159Pygocentrus_nattereri
ENSHCOG00000001863RBFOX38278.788ENSRNOG00000003386Rbfox310070.978Rattus_norvegicus
ENSHCOG00000001863RBFOX38088.889ENSRBIG00000040449RBFOX38673.597Rhinopithecus_bieti
ENSHCOG00000001863RBFOX38088.889ENSRROG00000000766RBFOX310070.253Rhinopithecus_roxellana
ENSHCOG00000001863RBFOX38089.655ENSSBOG00000031591RBFOX310069.649Saimiri_boliviensis_boliviensis
ENSHCOG00000001863RBFOX38862.575ENSSHAG00000016076RBFOX310060.317Sarcophilus_harrisii
ENSHCOG00000001863RBFOX38975.410ENSSFOG00015023260rbfox3a8578.413Scleropages_formosus
ENSHCOG00000001863RBFOX38864.214ENSSFOG00015004716RBFOX38965.079Scleropages_formosus
ENSHCOG00000001863RBFOX39370.958ENSSMAG00000012618rbfox3b7570.517Scophthalmus_maximus
ENSHCOG00000001863RBFOX39276.677ENSSMAG00000019052-10076.677Scophthalmus_maximus
ENSHCOG00000001863RBFOX38986.429ENSSDUG00000015801-8486.780Seriola_dumerili
ENSHCOG00000001863RBFOX39265.924ENSSDUG00000023183rbfox3b10065.064Seriola_dumerili
ENSHCOG00000001863RBFOX39275.159ENSSLDG00000000149rbfox3b8574.359Seriola_lalandi_dorsalis
ENSHCOG00000001863RBFOX38983.103ENSSLDG00000016098-9179.141Seriola_lalandi_dorsalis
ENSHCOG00000001863RBFOX38869.667ENSSPUG00000011733RBFOX39970.662Sphenodon_punctatus
ENSHCOG00000001863RBFOX37971.852ENSSPAG00000004898-7081.435Stegastes_partitus
ENSHCOG00000001863RBFOX39373.267ENSSPAG00000017571rbfox3b8472.277Stegastes_partitus
ENSHCOG00000001863RBFOX37281.818ENSSSCG00000039498RBFOX37387.234Sus_scrofa
ENSHCOG00000001863RBFOX39370.159ENSTRUG00000004894rbfox3b9168.615Takifugu_rubripes
ENSHCOG00000001863RBFOX39565.254ENSTNIG00000011278rbfox3b8864.489Tetraodon_nigroviridis
ENSHCOG00000001863RBFOX38089.655ENSTTRG00000003676RBFOX37888.636Tursiops_truncatus
ENSHCOG00000001863RBFOX38768.667ENSUAMG00000004668RBFOX310070.253Ursus_americanus
ENSHCOG00000001863RBFOX38089.655ENSVVUG00000017864RBFOX310070.570Vulpes_vulpes
ENSHCOG00000001863RBFOX37589.655ENSXETG00000020236rbfox38557.988Xenopus_tropicalis
ENSHCOG00000001863RBFOX39277.926ENSXCOG00000018262rbfox3b10076.923Xiphophorus_couchianus
ENSHCOG00000001863RBFOX39374.763ENSXMAG00000012939rbfox3b8574.359Xiphophorus_maculatus

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