EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002018 (Gene tree)
Gene ID: 109513745
Gene Symbol: sgf29
Alias: ccdc101|zgc:103544
Full Name: SAGA complex associated factor 29
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 43372 bases
Position: chrKV879869.1:1424130-1467501
Accession: 109513745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001115	DUF1325	PF07039.11	8e-40	1	1
ENSHCOP00000001117	DUF1325	PF07039.11	8e-40	1	1
ENSHCOP00000017882	DUF1325	PF07039.11	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012640	-	1923	-	ENSHCOP00000001117	290 (aa)	-	UPI00094EADE4
ENSHCOT00000012656	-	2692	-	ENSHCOP00000017882	315 (aa)	-	-
ENSHCOT00000012646	-	2087	XM_019866375	ENSHCOP00000001115	290 (aa)	XP_019721934	UPI00094EADE4

Gene Model

Click here to download ENSHCOG00000002018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002018	sgf29	100	91.379	ENSG00000176476	SGF29	99	91.379	Homo_sapiens
ENSHCOG00000002018	sgf29	100	96.897	ENSAPOG00000007072	sgf29	100	96.897	Acanthochromis_polyacanthus
ENSHCOG00000002018	sgf29	100	88.966	ENSAMEG00000015388	SGF29	99	88.966	Ailuropoda_melanoleuca
ENSHCOG00000002018	sgf29	86	95.582	ENSACIG00000024432	sgf29	100	95.582	Amphilophus_citrinellus
ENSHCOG00000002018	sgf29	100	96.552	ENSAOCG00000013494	sgf29	100	96.552	Amphiprion_ocellaris
ENSHCOG00000002018	sgf29	87	96.032	ENSAPEG00000007284	sgf29	93	96.032	Amphiprion_percula
ENSHCOG00000002018	sgf29	100	96.552	ENSATEG00000017566	sgf29	100	96.552	Anabas_testudineus
ENSHCOG00000002018	sgf29	100	90.690	ENSACAG00000006595	SGF29	99	90.690	Anolis_carolinensis
ENSHCOG00000002018	sgf29	100	91.379	ENSANAG00000037641	-	99	91.379	Aotus_nancymaae
ENSHCOG00000002018	sgf29	99	78.201	ENSANAG00000023337	-	92	78.201	Aotus_nancymaae
ENSHCOG00000002018	sgf29	97	74.113	ENSANAG00000032813	-	93	82.979	Aotus_nancymaae
ENSHCOG00000002018	sgf29	100	94.828	ENSACLG00000016730	sgf29	100	94.828	Astatotilapia_calliptera
ENSHCOG00000002018	sgf29	100	92.905	ENSAMXG00000003395	sgf29	99	92.905	Astyanax_mexicanus
ENSHCOG00000002018	sgf29	100	91.724	ENSBTAG00000016883	SGF29	99	91.724	Bos_taurus
ENSHCOG00000002018	sgf29	79	38.158	WBGene00021205	Y17G9B.8	89	38.158	Caenorhabditis_elegans
ENSHCOG00000002018	sgf29	100	91.379	ENSCJAG00000006577	SGF29	99	91.379	Callithrix_jacchus
ENSHCOG00000002018	sgf29	96	91.756	ENSCAFG00000017127	SGF29	91	91.756	Canis_familiaris
ENSHCOG00000002018	sgf29	96	91.756	ENSCAFG00020017597	SGF29	91	91.756	Canis_lupus_dingo
ENSHCOG00000002018	sgf29	100	91.724	ENSCHIG00000015325	SGF29	99	91.724	Capra_hircus
ENSHCOG00000002018	sgf29	100	92.069	ENSTSYG00000025878	-	99	92.069	Carlito_syrichta
ENSHCOG00000002018	sgf29	85	90.650	ENSTSYG00000003314	-	97	90.650	Carlito_syrichta
ENSHCOG00000002018	sgf29	84	80.162	ENSCAPG00000000732	SGF29	96	80.162	Cavia_aperea
ENSHCOG00000002018	sgf29	100	90.690	ENSCPOG00000027037	SGF29	99	90.690	Cavia_porcellus
ENSHCOG00000002018	sgf29	99	69.550	ENSCCAG00000027313	-	66	69.550	Cebus_capucinus
ENSHCOG00000002018	sgf29	100	91.379	ENSCCAG00000027359	-	99	91.379	Cebus_capucinus
ENSHCOG00000002018	sgf29	100	91.379	ENSCATG00000034020	SGF29	99	91.379	Cercocebus_atys
ENSHCOG00000002018	sgf29	100	91.379	ENSCLAG00000011510	SGF29	99	91.379	Chinchilla_lanigera
ENSHCOG00000002018	sgf29	100	86.824	ENSCSAG00000006259	SGF29	99	86.824	Chlorocebus_sabaeus
ENSHCOG00000002018	sgf29	65	87.234	ENSCHOG00000013831	-	80	87.234	Choloepus_hoffmanni
ENSHCOG00000002018	sgf29	100	91.379	ENSCPBG00000012638	SGF29	84	91.379	Chrysemys_picta_bellii
ENSHCOG00000002018	sgf29	99	61.538	ENSCING00000012953	-	98	61.538	Ciona_intestinalis
ENSHCOG00000002018	sgf29	71	57.005	ENSCSAVG00000007328	-	86	57.005	Ciona_savignyi
ENSHCOG00000002018	sgf29	85	90.244	ENSCANG00000039654	SGF29	99	90.244	Colobus_angolensis_palliatus
ENSHCOG00000002018	sgf29	100	91.724	ENSCGRG00001016730	-	99	91.724	Cricetulus_griseus_chok1gshd
ENSHCOG00000002018	sgf29	100	86.942	ENSCGRG00001014941	-	99	86.942	Cricetulus_griseus_chok1gshd
ENSHCOG00000002018	sgf29	100	91.379	ENSCGRG00000003808	Sgf29	99	91.379	Cricetulus_griseus_crigri
ENSHCOG00000002018	sgf29	83	95.021	ENSCSEG00000010575	sgf29	87	93.878	Cynoglossus_semilaevis
ENSHCOG00000002018	sgf29	100	95.862	ENSCVAG00000014381	sgf29	100	95.862	Cyprinodon_variegatus
ENSHCOG00000002018	sgf29	100	95.172	ENSDARG00000002339	sgf29	99	95.172	Danio_rerio
ENSHCOG00000002018	sgf29	100	91.724	ENSDNOG00000048338	SGF29	99	91.724	Dasypus_novemcinctus
ENSHCOG00000002018	sgf29	100	91.379	ENSDORG00000007002	Sgf29	99	91.379	Dipodomys_ordii
ENSHCOG00000002018	sgf29	99	48.958	FBgn0050390	Sgf29	94	48.958	Drosophila_melanogaster
ENSHCOG00000002018	sgf29	99	80.277	ENSEBUG00000008631	sgf29	97	80.277	Eptatretus_burgeri
ENSHCOG00000002018	sgf29	93	92.565	ENSEASG00005014751	SGF29	91	92.565	Equus_asinus_asinus
ENSHCOG00000002018	sgf29	100	91.724	ENSECAG00000011445	SGF29	94	91.724	Equus_caballus
ENSHCOG00000002018	sgf29	92	92.537	ENSEEUG00000008521	SGF29	100	92.537	Erinaceus_europaeus
ENSHCOG00000002018	sgf29	100	95.172	ENSELUG00000023888	sgf29	100	95.172	Esox_lucius
ENSHCOG00000002018	sgf29	100	91.724	ENSFCAG00000012297	SGF29	99	91.724	Felis_catus
ENSHCOG00000002018	sgf29	100	91.724	ENSFDAG00000012928	SGF29	99	91.724	Fukomys_damarensis
ENSHCOG00000002018	sgf29	87	96.429	ENSFHEG00000022427	sgf29	93	96.429	Fundulus_heteroclitus
ENSHCOG00000002018	sgf29	100	93.814	ENSGMOG00000000328	sgf29	100	93.814	Gadus_morhua
ENSHCOG00000002018	sgf29	100	90.000	ENSGALG00000020590	SGF29	99	90.000	Gallus_gallus
ENSHCOG00000002018	sgf29	100	95.862	ENSGAFG00000020626	sgf29	100	95.862	Gambusia_affinis
ENSHCOG00000002018	sgf29	100	93.448	ENSGACG00000015001	sgf29	100	93.448	Gasterosteus_aculeatus
ENSHCOG00000002018	sgf29	100	91.034	ENSGAGG00000012655	SGF29	99	91.034	Gopherus_agassizii
ENSHCOG00000002018	sgf29	100	90.690	ENSGGOG00000000807	-	99	90.690	Gorilla_gorilla
ENSHCOG00000002018	sgf29	81	80.085	ENSHBUG00000013677	sgf29	94	80.085	Haplochromis_burtoni
ENSHCOG00000002018	sgf29	100	91.379	ENSHGLG00000014468	SGF29	99	91.379	Heterocephalus_glaber_female
ENSHCOG00000002018	sgf29	100	91.379	ENSHGLG00100000132	SGF29	99	91.379	Heterocephalus_glaber_male
ENSHCOG00000002018	sgf29	100	95.862	ENSIPUG00000001851	sgf29	99	95.862	Ictalurus_punctatus
ENSHCOG00000002018	sgf29	100	91.724	ENSSTOG00000013258	SGF29	99	91.724	Ictidomys_tridecemlineatus
ENSHCOG00000002018	sgf29	100	91.724	ENSJJAG00000009013	Sgf29	99	91.724	Jaculus_jaculus
ENSHCOG00000002018	sgf29	100	94.138	ENSKMAG00000004341	sgf29	99	94.138	Kryptolebias_marmoratus
ENSHCOG00000002018	sgf29	86	95.200	ENSLBEG00000006754	sgf29	100	95.200	Labrus_bergylta
ENSHCOG00000002018	sgf29	84	77.778	ENSLACG00000005336	SGF29	99	77.778	Latimeria_chalumnae
ENSHCOG00000002018	sgf29	100	91.724	ENSLAFG00000028439	SGF29	99	91.724	Loxodonta_africana
ENSHCOG00000002018	sgf29	100	91.379	ENSMFAG00000038040	SGF29	99	91.379	Macaca_fascicularis
ENSHCOG00000002018	sgf29	100	91.379	ENSMMUG00000011370	SGF29	99	91.379	Macaca_mulatta
ENSHCOG00000002018	sgf29	100	91.034	ENSMNEG00000043534	SGF29	99	91.349	Macaca_nemestrina
ENSHCOG00000002018	sgf29	100	91.379	ENSMLEG00000031039	SGF29	99	91.379	Mandrillus_leucophaeus
ENSHCOG00000002018	sgf29	100	96.207	ENSMAMG00000017907	sgf29	100	96.207	Mastacembelus_armatus
ENSHCOG00000002018	sgf29	100	94.828	ENSMZEG00005002947	sgf29	100	94.828	Maylandia_zebra
ENSHCOG00000002018	sgf29	100	94.828	ENSMZEG00005001194	sgf29	100	94.828	Maylandia_zebra
ENSHCOG00000002018	sgf29	100	90.000	ENSMGAG00000012201	SGF29	99	90.000	Meleagris_gallopavo
ENSHCOG00000002018	sgf29	100	91.724	ENSMAUG00000011063	Sgf29	99	91.724	Mesocricetus_auratus
ENSHCOG00000002018	sgf29	100	92.069	ENSMICG00000009973	SGF29	99	92.069	Microcebus_murinus
ENSHCOG00000002018	sgf29	100	91.724	ENSMOCG00000021358	Sgf29	99	91.724	Microtus_ochrogaster
ENSHCOG00000002018	sgf29	86	92.490	ENSMMOG00000012706	sgf29	100	92.490	Mola_mola
ENSHCOG00000002018	sgf29	100	91.379	ENSMODG00000015642	SGF29	99	91.379	Monodelphis_domestica
ENSHCOG00000002018	sgf29	100	96.552	ENSMALG00000000231	sgf29	96	96.552	Monopterus_albus
ENSHCOG00000002018	sgf29	100	91.034	MGP_CAROLIEiJ_G0030456	Sgf29	99	91.034	Mus_caroli
ENSHCOG00000002018	sgf29	100	91.034	ENSMUSG00000030714	Sgf29	99	91.034	Mus_musculus
ENSHCOG00000002018	sgf29	100	91.034	MGP_PahariEiJ_G0013666	Sgf29	99	91.034	Mus_pahari
ENSHCOG00000002018	sgf29	100	91.034	MGP_SPRETEiJ_G0031570	Sgf29	99	91.034	Mus_spretus
ENSHCOG00000002018	sgf29	100	91.724	ENSMPUG00000012669	SGF29	99	91.724	Mustela_putorius_furo
ENSHCOG00000002018	sgf29	100	91.724	ENSMLUG00000022554	SGF29	99	91.724	Myotis_lucifugus
ENSHCOG00000002018	sgf29	100	91.379	ENSNGAG00000022634	Sgf29	99	91.379	Nannospalax_galili
ENSHCOG00000002018	sgf29	86	95.181	ENSNBRG00000020775	sgf29	100	95.181	Neolamprologus_brichardi
ENSHCOG00000002018	sgf29	99	80.969	ENSNLEG00000001604	SGF29	99	80.969	Nomascus_leucogenys
ENSHCOG00000002018	sgf29	76	94.667	ENSMEUG00000006221	SGF29	75	94.667	Notamacropus_eugenii
ENSHCOG00000002018	sgf29	100	92.069	ENSOPRG00000009316	SGF29	99	92.069	Ochotona_princeps
ENSHCOG00000002018	sgf29	100	90.690	ENSODEG00000013702	SGF29	99	90.690	Octodon_degus
ENSHCOG00000002018	sgf29	100	95.172	ENSONIG00000009377	sgf29	99	95.172	Oreochromis_niloticus
ENSHCOG00000002018	sgf29	68	92.424	ENSOANG00000009696	SGF29	100	92.424	Ornithorhynchus_anatinus
ENSHCOG00000002018	sgf29	84	72.131	ENSOCUG00000021684	-	100	72.131	Oryctolagus_cuniculus
ENSHCOG00000002018	sgf29	93	92.222	ENSOCUG00000025361	-	100	92.222	Oryctolagus_cuniculus
ENSHCOG00000002018	sgf29	100	94.483	ENSORLG00000027873	sgf29	100	94.483	Oryzias_latipes
ENSHCOG00000002018	sgf29	100	94.483	ENSORLG00020020976	-	100	94.483	Oryzias_latipes_hni
ENSHCOG00000002018	sgf29	100	94.483	ENSORLG00015011795	sgf29	100	94.483	Oryzias_latipes_hsok
ENSHCOG00000002018	sgf29	100	94.828	ENSOMEG00000020118	sgf29	100	94.828	Oryzias_melastigma
ENSHCOG00000002018	sgf29	100	85.862	ENSOGAG00000015794	-	99	85.862	Otolemur_garnettii
ENSHCOG00000002018	sgf29	99	62.718	ENSOGAG00000034571	-	98	62.718	Otolemur_garnettii
ENSHCOG00000002018	sgf29	100	91.724	ENSOARG00000003226	SGF29	99	91.724	Ovis_aries
ENSHCOG00000002018	sgf29	96	91.367	ENSPPAG00000039380	SGF29	98	91.736	Pan_paniscus
ENSHCOG00000002018	sgf29	100	91.724	ENSPPRG00000006831	SGF29	99	91.724	Panthera_pardus
ENSHCOG00000002018	sgf29	100	91.724	ENSPTIG00000014381	SGF29	99	91.724	Panthera_tigris_altaica
ENSHCOG00000002018	sgf29	100	68.966	ENSPTRG00000007925	SGF29	99	69.257	Pan_troglodytes
ENSHCOG00000002018	sgf29	100	91.379	ENSPANG00000019684	SGF29	99	91.379	Papio_anubis
ENSHCOG00000002018	sgf29	100	90.690	ENSPKIG00000018503	sgf29	99	90.690	Paramormyrops_kingsleyae
ENSHCOG00000002018	sgf29	100	88.276	ENSPMGG00000006683	sgf29	99	88.276	Periophthalmus_magnuspinnatus
ENSHCOG00000002018	sgf29	100	91.724	ENSPCIG00000025200	SGF29	99	91.724	Phascolarctos_cinereus
ENSHCOG00000002018	sgf29	100	96.207	ENSPFOG00000010035	sgf29	99	96.207	Poecilia_formosa
ENSHCOG00000002018	sgf29	100	96.207	ENSPLAG00000000559	sgf29	100	96.207	Poecilia_latipinna
ENSHCOG00000002018	sgf29	100	96.207	ENSPMEG00000007026	sgf29	100	96.207	Poecilia_mexicana
ENSHCOG00000002018	sgf29	100	96.552	ENSPREG00000011868	sgf29	100	96.552	Poecilia_reticulata
ENSHCOG00000002018	sgf29	100	91.379	ENSPPYG00000007233	SGF29	99	91.379	Pongo_abelii
ENSHCOG00000002018	sgf29	100	92.069	ENSPCOG00000028233	SGF29	99	92.069	Propithecus_coquereli
ENSHCOG00000002018	sgf29	87	94.444	ENSPNYG00000012353	sgf29	100	95.181	Pundamilia_nyererei
ENSHCOG00000002018	sgf29	86	95.984	ENSPNAG00000014651	sgf29	100	95.984	Pygocentrus_nattereri
ENSHCOG00000002018	sgf29	100	91.379	ENSRNOG00000019245	Sgf29	99	91.379	Rattus_norvegicus
ENSHCOG00000002018	sgf29	100	91.379	ENSRBIG00000041003	SGF29	99	91.379	Rhinopithecus_bieti
ENSHCOG00000002018	sgf29	100	91.379	ENSRROG00000044894	SGF29	99	91.379	Rhinopithecus_roxellana
ENSHCOG00000002018	sgf29	92	92.105	ENSSBOG00000008004	SGF29	100	92.369	Saimiri_boliviensis_boliviensis
ENSHCOG00000002018	sgf29	100	91.724	ENSSHAG00000011279	-	99	91.724	Sarcophilus_harrisii
ENSHCOG00000002018	sgf29	82	62.869	ENSSHAG00000002930	-	100	62.869	Sarcophilus_harrisii
ENSHCOG00000002018	sgf29	100	87.931	ENSSFOG00015001254	sgf29	99	87.931	Scleropages_formosus
ENSHCOG00000002018	sgf29	100	96.552	ENSSMAG00000016613	sgf29	100	96.552	Scophthalmus_maximus
ENSHCOG00000002018	sgf29	100	96.552	ENSSDUG00000005977	sgf29	100	96.552	Seriola_dumerili
ENSHCOG00000002018	sgf29	100	96.552	ENSSLDG00000012446	sgf29	100	96.552	Seriola_lalandi_dorsalis
ENSHCOG00000002018	sgf29	100	91.379	ENSSPUG00000010121	SGF29	99	91.379	Sphenodon_punctatus
ENSHCOG00000002018	sgf29	100	96.552	ENSSPAG00000018994	sgf29	100	96.552	Stegastes_partitus
ENSHCOG00000002018	sgf29	100	91.724	ENSSSCG00000022778	SGF29	99	91.724	Sus_scrofa
ENSHCOG00000002018	sgf29	97	94.681	ENSTNIG00000006496	SGF29	100	94.681	Tetraodon_nigroviridis
ENSHCOG00000002018	sgf29	100	96.897	ENSTNIG00000001984	sgf29	99	96.897	Tetraodon_nigroviridis
ENSHCOG00000002018	sgf29	97	90.426	ENSUAMG00000010172	SGF29	85	92.565	Ursus_americanus
ENSHCOG00000002018	sgf29	89	91.860	ENSUMAG00000010966	SGF29	79	91.860	Ursus_maritimus
ENSHCOG00000002018	sgf29	100	92.069	ENSXETG00000033185	sgf29	99	92.069	Xenopus_tropicalis
ENSHCOG00000002018	sgf29	99	96.181	ENSXCOG00000011501	sgf29	99	96.181	Xiphophorus_couchianus
ENSHCOG00000002018	sgf29	100	96.207	ENSXMAG00000010932	sgf29	100	96.207	Xiphophorus_maculatus