EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002041 (Gene tree)
Gene ID: 109519781
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC109519781
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5018 bases
Position: chrKV880079.1:833417-838434
Accession: 109519781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017899	zf-CCCH	PF00642.24	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012613	-	4851	XM_019876513	ENSHCOP00000017899	241 (aa)	XP_019732072	UPI00094E1587

Gene Model

Click here to download ENSHCOG00000002041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002041's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002041	si:ch211-113e8.11	99	55.212	ENSAPOG00000010990	si:ch211-113e8.11	99	55.985	Acanthochromis_polyacanthus
ENSHCOG00000002041	si:ch211-113e8.11	81	56.784	ENSACIG00000011566	si:ch211-113e8.11	95	58.794	Amphilophus_citrinellus
ENSHCOG00000002041	si:ch211-113e8.11	99	56.202	ENSAOCG00000022156	si:ch211-113e8.11	99	56.977	Amphiprion_ocellaris
ENSHCOG00000002041	si:ch211-113e8.11	99	55.814	ENSAPEG00000018284	si:ch211-113e8.11	99	56.589	Amphiprion_percula
ENSHCOG00000002041	si:ch211-113e8.11	99	56.574	ENSATEG00000018391	si:ch211-113e8.11	99	54.980	Anabas_testudineus
ENSHCOG00000002041	si:ch211-113e8.11	99	55.833	ENSACLG00000017011	si:ch211-113e8.11	99	56.846	Astatotilapia_calliptera
ENSHCOG00000002041	si:ch211-113e8.11	97	43.529	ENSAMXG00000000733	si:ch211-113e8.11	97	43.922	Astyanax_mexicanus
ENSHCOG00000002041	si:ch211-113e8.11	99	53.077	ENSCSEG00000004538	si:ch211-113e8.11	99	53.077	Cynoglossus_semilaevis
ENSHCOG00000002041	si:ch211-113e8.11	99	50.201	ENSCVAG00000020156	si:ch211-113e8.11	99	52.209	Cyprinodon_variegatus
ENSHCOG00000002041	si:ch211-113e8.11	96	42.500	ENSDARG00000076585	si:ch211-113e8.11	99	45.228	Danio_rerio
ENSHCOG00000002041	si:ch211-113e8.11	62	31.646	FBgn0259728	CG42382	92	30.256	Drosophila_melanogaster
ENSHCOG00000002041	si:ch211-113e8.11	99	46.947	ENSELUG00000001130	si:ch211-113e8.11	99	47.710	Esox_lucius
ENSHCOG00000002041	si:ch211-113e8.11	99	53.909	ENSFHEG00000007870	si:ch211-113e8.11	99	52.893	Fundulus_heteroclitus
ENSHCOG00000002041	si:ch211-113e8.11	99	54.618	ENSGAFG00000020570	si:ch211-113e8.11	99	54.217	Gambusia_affinis
ENSHCOG00000002041	si:ch211-113e8.11	99	54.472	ENSHBUG00000003552	si:ch211-113e8.11	99	54.472	Haplochromis_burtoni
ENSHCOG00000002041	si:ch211-113e8.11	95	48.101	ENSIPUG00000002260	si:ch211-113e8.11	93	48.101	Ictalurus_punctatus
ENSHCOG00000002041	si:ch211-113e8.11	99	51.012	ENSKMAG00000000086	si:ch211-113e8.11	99	51.613	Kryptolebias_marmoratus
ENSHCOG00000002041	si:ch211-113e8.11	99	50.000	ENSLBEG00000008353	si:ch211-113e8.11	99	52.060	Labrus_bergylta
ENSHCOG00000002041	si:ch211-113e8.11	61	46.622	ENSLACG00000004304	si:ch211-113e8.11	74	43.919	Latimeria_chalumnae
ENSHCOG00000002041	si:ch211-113e8.11	85	54.978	ENSMAMG00000019098	si:ch211-113e8.11	90	56.579	Mastacembelus_armatus
ENSHCOG00000002041	si:ch211-113e8.11	99	55.000	ENSMZEG00005023658	si:ch211-113e8.11	99	55.967	Maylandia_zebra
ENSHCOG00000002041	si:ch211-113e8.11	68	63.690	ENSMMOG00000007254	si:ch211-113e8.11	99	50.820	Mola_mola
ENSHCOG00000002041	si:ch211-113e8.11	99	50.936	ENSMALG00000005110	si:ch211-113e8.11	99	53.612	Monopterus_albus
ENSHCOG00000002041	si:ch211-113e8.11	99	55.417	ENSNBRG00000015060	si:ch211-113e8.11	99	56.432	Neolamprologus_brichardi
ENSHCOG00000002041	si:ch211-113e8.11	99	45.635	ENSORLG00000023699	si:ch211-113e8.11	99	47.347	Oryzias_latipes
ENSHCOG00000002041	si:ch211-113e8.11	99	45.635	ENSORLG00020022094	si:ch211-113e8.11	99	47.967	Oryzias_latipes_hni
ENSHCOG00000002041	si:ch211-113e8.11	99	46.032	ENSORLG00015002588	si:ch211-113e8.11	99	47.347	Oryzias_latipes_hsok
ENSHCOG00000002041	si:ch211-113e8.11	99	50.388	ENSOMEG00000010624	si:ch211-113e8.11	99	49.416	Oryzias_melastigma
ENSHCOG00000002041	si:ch211-113e8.11	56	54.225	ENSPKIG00000023576	si:ch211-113e8.11	95	43.265	Paramormyrops_kingsleyae
ENSHCOG00000002041	si:ch211-113e8.11	96	49.569	ENSPMGG00000018547	si:ch211-113e8.11	98	48.707	Periophthalmus_magnuspinnatus
ENSHCOG00000002041	si:ch211-113e8.11	98	55.556	ENSPFOG00000007950	si:ch211-113e8.11	100	54.098	Poecilia_formosa
ENSHCOG00000002041	si:ch211-113e8.11	99	55.645	ENSPLAG00000002081	si:ch211-113e8.11	99	54.618	Poecilia_latipinna
ENSHCOG00000002041	si:ch211-113e8.11	99	55.242	ENSPMEG00000017505	si:ch211-113e8.11	99	54.618	Poecilia_mexicana
ENSHCOG00000002041	si:ch211-113e8.11	99	57.085	ENSPREG00000008530	si:ch211-113e8.11	99	56.557	Poecilia_reticulata
ENSHCOG00000002041	si:ch211-113e8.11	99	55.417	ENSPNYG00000022856	si:ch211-113e8.11	99	56.432	Pundamilia_nyererei
ENSHCOG00000002041	si:ch211-113e8.11	98	42.857	ENSPNAG00000013782	si:ch211-113e8.11	99	42.460	Pygocentrus_nattereri
ENSHCOG00000002041	si:ch211-113e8.11	97	44.958	ENSSFOG00015000959	si:ch211-113e8.11	97	44.958	Scleropages_formosus
ENSHCOG00000002041	si:ch211-113e8.11	99	52.290	ENSSMAG00000009732	si:ch211-113e8.11	99	56.175	Scophthalmus_maximus
ENSHCOG00000002041	si:ch211-113e8.11	99	54.615	ENSSDUG00000000112	si:ch211-113e8.11	99	55.859	Seriola_dumerili
ENSHCOG00000002041	si:ch211-113e8.11	99	54.231	ENSSLDG00000003287	si:ch211-113e8.11	99	55.469	Seriola_lalandi_dorsalis
ENSHCOG00000002041	si:ch211-113e8.11	99	56.371	ENSSPAG00000001375	si:ch211-113e8.11	99	56.371	Stegastes_partitus
ENSHCOG00000002041	si:ch211-113e8.11	99	49.206	ENSTRUG00000023898	si:ch211-113e8.11	99	50.598	Takifugu_rubripes
ENSHCOG00000002041	si:ch211-113e8.11	99	54.582	ENSXMAG00000024104	si:ch211-113e8.11	99	54.618	Xiphophorus_maculatus