EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002048 (Gene tree)
Gene ID: 109521735
Gene Symbol: stn1
Alias: obfc1|zgc:64174
Full Name: STN1%2C CST complex subunit
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 7620 bases
Position: chrKV880113.1:841045-848664
Accession: 109521735
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017909	tRNA_anti-codon	PF01336.25	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012605	-	2040	XM_019879765	ENSHCOP00000017909	360 (aa)	XP_019735324	UPI00094E0E41

Gene Model

Click here to download ENSHCOG00000002048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002048's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002048	stn1	98	41.144	ENSG00000107960	STN1	98	41.144	Homo_sapiens
ENSHCOG00000002048	stn1	98	40.164	ENSAMEG00000017971	STN1	96	40.164	Ailuropoda_melanoleuca
ENSHCOG00000002048	stn1	98	43.017	ENSAPLG00000006661	STN1	98	43.017	Anas_platyrhynchos
ENSHCOG00000002048	stn1	98	41.620	ENSACAG00000004954	STN1	97	41.620	Anolis_carolinensis
ENSHCOG00000002048	stn1	98	40.548	ENSANAG00000038147	STN1	98	40.548	Aotus_nancymaae
ENSHCOG00000002048	stn1	98	40.108	ENSBTAG00000015019	STN1	98	40.108	Bos_taurus
ENSHCOG00000002048	stn1	98	40.548	ENSCJAG00000040388	STN1	98	40.548	Callithrix_jacchus
ENSHCOG00000002048	stn1	98	38.965	ENSCAFG00000010483	STN1	98	38.965	Canis_familiaris
ENSHCOG00000002048	stn1	98	38.017	ENSCAFG00020010650	STN1	98	38.017	Canis_lupus_dingo
ENSHCOG00000002048	stn1	98	36.723	ENSCHIG00000003253	-	95	36.723	Capra_hircus
ENSHCOG00000002048	stn1	98	39.566	ENSCHIG00000019425	-	98	39.566	Capra_hircus
ENSHCOG00000002048	stn1	88	37.994	ENSCAPG00000016278	STN1	100	37.994	Cavia_aperea
ENSHCOG00000002048	stn1	98	41.096	ENSCPOG00000006273	STN1	96	41.096	Cavia_porcellus
ENSHCOG00000002048	stn1	98	40.548	ENSCCAG00000020507	STN1	98	41.370	Cebus_capucinus
ENSHCOG00000002048	stn1	98	40.599	ENSCATG00000043103	STN1	98	40.599	Cercocebus_atys
ENSHCOG00000002048	stn1	98	40.548	ENSCLAG00000001617	STN1	96	40.548	Chinchilla_lanigera
ENSHCOG00000002048	stn1	98	40.162	ENSCSAG00000005318	STN1	98	40.162	Chlorocebus_sabaeus
ENSHCOG00000002048	stn1	98	42.308	ENSCPBG00000024481	STN1	97	42.308	Chrysemys_picta_bellii
ENSHCOG00000002048	stn1	98	41.417	ENSCANG00000029004	STN1	98	41.417	Colobus_angolensis_palliatus
ENSHCOG00000002048	stn1	98	40.845	ENSCGRG00001023175	Stn1	95	40.845	Cricetulus_griseus_chok1gshd
ENSHCOG00000002048	stn1	98	41.576	ENSCGRG00000004324	Stn1	96	41.576	Cricetulus_griseus_crigri
ENSHCOG00000002048	stn1	98	55.402	ENSDARG00000007734	stn1	97	55.402	Danio_rerio
ENSHCOG00000002048	stn1	83	37.618	ENSDNOG00000011022	STN1	96	37.618	Dasypus_novemcinctus
ENSHCOG00000002048	stn1	97	40.390	ENSDORG00000005994	Stn1	98	40.934	Dipodomys_ordii
ENSHCOG00000002048	stn1	98	38.441	ENSETEG00000013967	STN1	98	38.441	Echinops_telfairi
ENSHCOG00000002048	stn1	98	40.710	ENSEASG00005015134	STN1	98	40.710	Equus_asinus_asinus
ENSHCOG00000002048	stn1	98	40.164	ENSECAG00000023477	STN1	98	40.164	Equus_caballus
ENSHCOG00000002048	stn1	97	40.055	ENSFCAG00000030378	STN1	98	40.599	Felis_catus
ENSHCOG00000002048	stn1	98	44.110	ENSFALG00000008791	STN1	97	44.110	Ficedula_albicollis
ENSHCOG00000002048	stn1	98	38.108	ENSFDAG00000007528	STN1	96	38.108	Fukomys_damarensis
ENSHCOG00000002048	stn1	98	44.044	ENSGALG00000008304	STN1	98	44.044	Gallus_gallus
ENSHCOG00000002048	stn1	78	41.156	ENSGAGG00000003673	STN1	88	41.156	Gopherus_agassizii
ENSHCOG00000002048	stn1	98	40.872	ENSGGOG00000008979	STN1	98	40.872	Gorilla_gorilla
ENSHCOG00000002048	stn1	98	39.178	ENSHGLG00000002775	OBFC1	96	39.178	Heterocephalus_glaber_female
ENSHCOG00000002048	stn1	98	39.178	ENSHGLG00100012701	STN1	96	39.178	Heterocephalus_glaber_male
ENSHCOG00000002048	stn1	98	39.946	ENSSTOG00000011905	STN1	96	40.483	Ictidomys_tridecemlineatus
ENSHCOG00000002048	stn1	97	39.833	ENSJJAG00000020389	Stn1	95	39.833	Jaculus_jaculus
ENSHCOG00000002048	stn1	98	39.510	ENSLACG00000012381	STN1	98	39.510	Latimeria_chalumnae
ENSHCOG00000002048	stn1	98	41.160	ENSLAFG00000004232	STN1	96	41.370	Loxodonta_africana
ENSHCOG00000002048	stn1	98	40.599	ENSMFAG00000041817	STN1	98	40.599	Macaca_fascicularis
ENSHCOG00000002048	stn1	98	40.599	ENSMMUG00000015323	STN1	98	40.599	Macaca_mulatta
ENSHCOG00000002048	stn1	98	40.599	ENSMNEG00000031906	STN1	98	40.599	Macaca_nemestrina
ENSHCOG00000002048	stn1	98	40.599	ENSMLEG00000040619	STN1	98	40.599	Mandrillus_leucophaeus
ENSHCOG00000002048	stn1	98	42.149	ENSMGAG00000010550	STN1	96	42.149	Meleagris_gallopavo
ENSHCOG00000002048	stn1	98	42.507	ENSMAUG00000015671	Stn1	96	42.507	Mesocricetus_auratus
ENSHCOG00000002048	stn1	98	39.011	ENSMICG00000012547	STN1	98	41.398	Microcebus_murinus
ENSHCOG00000002048	stn1	98	39.086	ENSMOCG00000009637	Stn1	96	39.086	Microtus_ochrogaster
ENSHCOG00000002048	stn1	98	39.894	ENSMODG00000011003	STN1	98	39.894	Monodelphis_domestica
ENSHCOG00000002048	stn1	98	41.033	MGP_CAROLIEiJ_G0023057	Stn1	96	41.033	Mus_caroli
ENSHCOG00000002048	stn1	98	41.081	ENSMUSG00000042694	Stn1	96	41.081	Mus_musculus
ENSHCOG00000002048	stn1	98	41.257	MGP_PahariEiJ_G0014547	Stn1	96	41.257	Mus_pahari
ENSHCOG00000002048	stn1	98	40.811	MGP_SPRETEiJ_G0023978	Stn1	96	40.811	Mus_spretus
ENSHCOG00000002048	stn1	98	38.736	ENSMPUG00000016800	STN1	98	38.736	Mustela_putorius_furo
ENSHCOG00000002048	stn1	98	39.674	ENSMLUG00000002037	STN1	96	39.674	Myotis_lucifugus
ENSHCOG00000002048	stn1	98	42.432	ENSNGAG00000023986	Stn1	96	42.432	Nannospalax_galili
ENSHCOG00000002048	stn1	98	40.437	ENSNLEG00000015282	STN1	98	40.437	Nomascus_leucogenys
ENSHCOG00000002048	stn1	98	39.730	ENSOPRG00000010707	STN1	98	39.730	Ochotona_princeps
ENSHCOG00000002048	stn1	99	39.566	ENSODEG00000007270	STN1	96	39.566	Octodon_degus
ENSHCOG00000002048	stn1	98	41.962	ENSOANG00000001628	STN1	98	41.962	Ornithorhynchus_anatinus
ENSHCOG00000002048	stn1	98	40.659	ENSOCUG00000003028	STN1	96	41.484	Oryctolagus_cuniculus
ENSHCOG00000002048	stn1	99	69.274	ENSORLG00000002353	stn1	99	69.577	Oryzias_latipes
ENSHCOG00000002048	stn1	99	69.188	ENSORLG00020012935	stn1	99	69.188	Oryzias_latipes_hni
ENSHCOG00000002048	stn1	99	68.715	ENSORLG00015012154	stn1	99	68.715	Oryzias_latipes_hsok
ENSHCOG00000002048	stn1	98	39.189	ENSOGAG00000008722	STN1	96	39.189	Otolemur_garnettii
ENSHCOG00000002048	stn1	98	40.054	ENSOARG00000004883	STN1	96	40.054	Ovis_aries
ENSHCOG00000002048	stn1	98	40.872	ENSPPAG00000030947	STN1	98	40.872	Pan_paniscus
ENSHCOG00000002048	stn1	97	40.608	ENSPPRG00000010476	STN1	98	41.144	Panthera_pardus
ENSHCOG00000002048	stn1	97	40.110	ENSPTIG00000017333	STN1	98	41.192	Panthera_tigris_altaica
ENSHCOG00000002048	stn1	98	40.872	ENSPTRG00000002919	STN1	98	40.872	Pan_troglodytes
ENSHCOG00000002048	stn1	98	40.599	ENSPANG00000020926	STN1	98	40.599	Papio_anubis
ENSHCOG00000002048	stn1	99	55.313	ENSPKIG00000000721	stn1	97	55.313	Paramormyrops_kingsleyae
ENSHCOG00000002048	stn1	98	42.276	ENSPSIG00000010802	STN1	97	42.276	Pelodiscus_sinensis
ENSHCOG00000002048	stn1	98	40.921	ENSPEMG00000013944	Stn1	96	40.921	Peromyscus_maniculatus_bairdii
ENSHCOG00000002048	stn1	98	41.622	ENSPCIG00000024497	STN1	98	41.622	Phascolarctos_cinereus
ENSHCOG00000002048	stn1	98	40.327	ENSPPYG00000002628	STN1	98	40.327	Pongo_abelii
ENSHCOG00000002048	stn1	98	41.209	ENSPCOG00000017648	STN1	98	41.209	Propithecus_coquereli
ENSHCOG00000002048	stn1	98	40.379	ENSPVAG00000004187	STN1	98	40.379	Pteropus_vampyrus
ENSHCOG00000002048	stn1	98	39.037	ENSRNOG00000020376	Stn1	96	39.037	Rattus_norvegicus
ENSHCOG00000002048	stn1	98	40.872	ENSRBIG00000039819	STN1	98	40.872	Rhinopithecus_bieti
ENSHCOG00000002048	stn1	98	40.872	ENSRROG00000013903	STN1	98	40.872	Rhinopithecus_roxellana
ENSHCOG00000002048	stn1	98	40.548	ENSSBOG00000031516	STN1	98	40.548	Saimiri_boliviensis_boliviensis
ENSHCOG00000002048	stn1	99	41.734	ENSSHAG00000017550	STN1	98	41.734	Sarcophilus_harrisii
ENSHCOG00000002048	stn1	98	57.260	ENSSFOG00015004107	stn1	98	57.260	Scleropages_formosus
ENSHCOG00000002048	stn1	98	39.891	ENSSSCG00000010605	STN1	83	39.891	Sus_scrofa
ENSHCOG00000002048	stn1	98	40.420	ENSTGUG00000010354	STN1	98	40.420	Taeniopygia_guttata
ENSHCOG00000002048	stn1	99	65.363	ENSTNIG00000014162	stn1	97	65.363	Tetraodon_nigroviridis
ENSHCOG00000002048	stn1	66	50.000	ENSTBEG00000000659	STN1	63	50.000	Tupaia_belangeri
ENSHCOG00000002048	stn1	98	39.178	ENSTTRG00000003375	STN1	98	39.178	Tursiops_truncatus
ENSHCOG00000002048	stn1	98	39.444	ENSUMAG00000023647	STN1	97	39.444	Ursus_maritimus
ENSHCOG00000002048	stn1	98	40.379	ENSVPAG00000002530	STN1	98	40.379	Vicugna_pacos
ENSHCOG00000002048	stn1	98	37.838	ENSVVUG00000004636	-	58	37.838	Vulpes_vulpes
ENSHCOG00000002048	stn1	97	38.719	ENSXETG00000011402	STN1	98	38.504	Xenopus_tropicalis