EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000002074 (Gene tree)
Gene ID
109519779
Gene Symbol
rbm47
Alias
si:ch211-241e15.2|wu:fj94a03
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Plus strand
Length
29632 bases
Position
chrKV880079.1:795839-825470
Accession
109519779
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000001157RRM_1PF00076.221.2e-4013
ENSHCOP00000001157RRM_1PF00076.221.2e-4023
ENSHCOP00000001157RRM_1PF00076.221.2e-4033
ENSHCOP00000017908RRM_1PF00076.221.6e-4013
ENSHCOP00000017908RRM_1PF00076.221.6e-4023
ENSHCOP00000017908RRM_1PF00076.221.6e-4033
ENSHCOP00000001145RRM_1PF00076.221.8e-4013
ENSHCOP00000001145RRM_1PF00076.221.8e-4023
ENSHCOP00000001145RRM_1PF00076.221.8e-4033
ENSHCOP00000001152RRM_1PF00076.221.8e-4013
ENSHCOP00000001152RRM_1PF00076.221.8e-4023
ENSHCOP00000001152RRM_1PF00076.221.8e-4033
ENSHCOP00000001168RRM_1PF00076.221.8e-4013
ENSHCOP00000001168RRM_1PF00076.221.8e-4023
ENSHCOP00000001168RRM_1PF00076.221.8e-4033
ENSHCOP00000017903RRM_1PF00076.221.8e-4013
ENSHCOP00000017903RRM_1PF00076.221.8e-4023
ENSHCOP00000017903RRM_1PF00076.221.8e-4033
ENSHCOP00000017902RRM_1PF00076.221.9e-4013
ENSHCOP00000017902RRM_1PF00076.221.9e-4023
ENSHCOP00000017902RRM_1PF00076.221.9e-4033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000012604-5288-ENSHCOP00000017908573 (aa)--
ENSHCOT00000012579-4876XM_019876512ENSHCOP00000001157534 (aa)XP_019732071UPI00094E018F
ENSHCOT00000012596-5312XM_019876506ENSHCOP00000001145581 (aa)XP_019732065UPI00094F137E
ENSHCOT00000012568-5017XM_019876502ENSHCOP00000001168581 (aa)XP_019732061UPI00094F137E
ENSHCOT00000012584-4974XM_019876500ENSHCOP00000001152581 (aa)XP_019732059UPI00094F137E
ENSHCOT00000012589-4915XM_019876505ENSHCOP00000017903581 (aa)XP_019732064UPI00094F137E
ENSHCOT00000012608-1773XM_019876508ENSHCOP00000017902590 (aa)XP_019732067-
Gene Model
Click here to download ENSHCOG00000002074's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002074's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000002074rbm475752.258ENSHCOG00000008764syncrip7745.368
ENSHCOG00000002074rbm475654.125ENSHCOG00000012998rbm468452.665
ENSHCOG00000002074rbm478147.670ENSHCOG00000017669a1cf9049.283
ENSHCOG00000002074rbm475654.426ENSHCOG00000001582hnrnpr6846.539
ENSHCOG00000002074rbm475654.485ENSHCOG00000014547syncripl7845.688
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000002074rbm479981.746ENSG00000163694RBM4710084.932Homo_sapiens
ENSHCOG00000002074rbm479995.887ENSAPOG00000011062rbm479995.887Acanthochromis_polyacanthus
ENSHCOG00000002074rbm479385.634ENSAMEG00000009672RBM479976.246Ailuropoda_melanoleuca
ENSHCOG00000002074rbm479992.230ENSACIG00000011531rbm479992.399Amphilophus_citrinellus
ENSHCOG00000002074rbm479995.887ENSAOCG00000022245rbm479995.887Amphiprion_ocellaris
ENSHCOG00000002074rbm479995.887ENSAPEG00000018304rbm479995.887Amphiprion_percula
ENSHCOG00000002074rbm479995.373ENSATEG00000018400rbm479995.373Anabas_testudineus
ENSHCOG00000002074rbm479976.254ENSAPLG00000013974RBM479975.920Anas_platyrhynchos
ENSHCOG00000002074rbm479979.284ENSACAG00000011833RBM479975.541Anolis_carolinensis
ENSHCOG00000002074rbm479982.540ENSANAG00000029440RBM479584.309Aotus_nancymaae
ENSHCOG00000002074rbm479993.573ENSACLG00000016902rbm479993.573Astatotilapia_calliptera
ENSHCOG00000002074rbm479981.848ENSAMXG00000021794rbm479980.890Astyanax_mexicanus
ENSHCOG00000002074rbm479978.316ENSBTAG00000002356RBM479976.884Bos_taurus
ENSHCOG00000002074rbm479982.540ENSCJAG00000019385RBM479584.574Callithrix_jacchus
ENSHCOG00000002074rbm479380.965ENSCAFG00000015898RBM479976.007Canis_familiaris
ENSHCOG00000002074rbm478278.732ENSCAFG00020010558RBM479476.739Canis_lupus_dingo
ENSHCOG00000002074rbm479978.316ENSCHIG00000026214RBM479976.884Capra_hircus
ENSHCOG00000002074rbm478388.128ENSTSYG00000033612RBM479288.128Carlito_syrichta
ENSHCOG00000002074rbm479972.564ENSCAPG00000008426RBM479971.644Cavia_aperea
ENSHCOG00000002074rbm479982.058ENSCPOG00000014100RBM479977.387Cavia_porcellus
ENSHCOG00000002074rbm479955.630ENSCCAG00000024397-9954.622Cebus_capucinus
ENSHCOG00000002074rbm479984.043ENSCCAG00000030129-9584.043Cebus_capucinus
ENSHCOG00000002074rbm479981.746ENSCATG00000042064RBM479584.309Cercocebus_atys
ENSHCOG00000002074rbm479982.058ENSCLAG00000001684RBM4710081.875Chinchilla_lanigera
ENSHCOG00000002074rbm479385.876ENSCSAG00000017060RBM479976.628Chlorocebus_sabaeus
ENSHCOG00000002074rbm478975.281ENSCHOG00000011731RBM478876.906Choloepus_hoffmanni
ENSHCOG00000002074rbm479982.653ENSCPBG00000013831RBM479978.094Chrysemys_picta_bellii
ENSHCOG00000002074rbm479981.481ENSCANG00000019997RBM479584.043Colobus_angolensis_palliatus
ENSHCOG00000002074rbm479981.746ENSCGRG00001000623-9974.875Cricetulus_griseus_chok1gshd
ENSHCOG00000002074rbm479976.781ENSCGRG00001020102-9970.240Cricetulus_griseus_chok1gshd
ENSHCOG00000002074rbm479978.934ENSCGRG00000007762-10079.375Cricetulus_griseus_crigri
ENSHCOG00000002074rbm479976.517ENSCGRG00000014760-9772.798Cricetulus_griseus_crigri
ENSHCOG00000002074rbm479989.207ENSCSEG00000004545rbm479989.207Cynoglossus_semilaevis
ENSHCOG00000002074rbm479992.802ENSCVAG00000020144rbm479990.488Cyprinodon_variegatus
ENSHCOG00000002074rbm479985.934ENSDARG00000061985rbm479985.934Danio_rerio
ENSHCOG00000002074rbm479383.708ENSDNOG00000046854RBM479976.728Dasypus_novemcinctus
ENSHCOG00000002074rbm479980.253ENSDORG00000010144Rbm479976.285Dipodomys_ordii
ENSHCOG00000002074rbm479382.402ENSETEG00000009194RBM479976.000Echinops_telfairi
ENSHCOG00000002074rbm479174.855ENSEBUG00000011912rbm478774.855Eptatretus_burgeri
ENSHCOG00000002074rbm479383.427ENSEASG00005008443RBM479976.884Equus_asinus_asinus
ENSHCOG00000002074rbm479383.427ENSECAG00000004400RBM479976.884Equus_caballus
ENSHCOG00000002074rbm477582.759ENSEEUG00000001194RBM477584.483Erinaceus_europaeus
ENSHCOG00000002074rbm479987.817ENSELUG00000006148rbm479986.111Esox_lucius
ENSHCOG00000002074rbm479385.634ENSFCAG00000012399RBM479977.609Felis_catus
ENSHCOG00000002074rbm479981.378ENSFALG00000002861RBM479979.097Ficedula_albicollis
ENSHCOG00000002074rbm479979.540ENSFDAG00000016326RBM479976.094Fukomys_damarensis
ENSHCOG00000002074rbm479992.031ENSFHEG00000007938rbm479988.663Fundulus_heteroclitus
ENSHCOG00000002074rbm479988.071ENSGMOG00000014802rbm479987.626Gadus_morhua
ENSHCOG00000002074rbm477381.633ENSGALG00000014267RBM479984.921Gallus_gallus
ENSHCOG00000002074rbm477388.432ENSGAFG00000020571rbm479890.957Gambusia_affinis
ENSHCOG00000002074rbm479989.681ENSGACG00000016223rbm479989.691Gasterosteus_aculeatus
ENSHCOG00000002074rbm479982.653ENSGAGG00000020051RBM479978.261Gopherus_agassizii
ENSHCOG00000002074rbm479981.746ENSGGOG00000001367RBM479584.309Gorilla_gorilla
ENSHCOG00000002074rbm479993.573ENSHBUG00000003520rbm479993.573Haplochromis_burtoni
ENSHCOG00000002074rbm479959.074ENSHGLG00000016914RBM4710080.625Heterocephalus_glaber_female
ENSHCOG00000002074rbm479982.804ENSHGLG00100014028-10080.625Heterocephalus_glaber_male
ENSHCOG00000002074rbm479968.235ENSHGLG00100003071-9968.289Heterocephalus_glaber_male
ENSHCOG00000002074rbm479986.375ENSIPUG00000004743rbm479986.375Ictalurus_punctatus
ENSHCOG00000002074rbm479383.662ENSSTOG00000004727RBM4710079.375Ictidomys_tridecemlineatus
ENSHCOG00000002074rbm479386.479ENSJJAG00000013823Rbm479975.833Jaculus_jaculus
ENSHCOG00000002074rbm479993.077ENSKMAG00000000084rbm479993.077Kryptolebias_marmoratus
ENSHCOG00000002074rbm479994.330ENSLBEG00000008436rbm479992.542Labrus_bergylta
ENSHCOG00000002074rbm479387.640ENSLACG00000007196RBM479977.946Latimeria_chalumnae
ENSHCOG00000002074rbm479982.631ENSLOCG00000012966rbm479581.926Lepisosteus_oculatus
ENSHCOG00000002074rbm479979.284ENSLAFG00000011998RBM479975.960Loxodonta_africana
ENSHCOG00000002074rbm479981.746ENSMFAG00000037967RBM479584.309Macaca_fascicularis
ENSHCOG00000002074rbm479385.876ENSMMUG00000012036RBM4710083.077Macaca_mulatta
ENSHCOG00000002074rbm479981.481ENSMNEG00000040774RBM479584.043Macaca_nemestrina
ENSHCOG00000002074rbm479982.650ENSMLEG00000041432RBM479985.489Mandrillus_leucophaeus
ENSHCOG00000002074rbm479994.859ENSMAMG00000019143rbm479993.271Mastacembelus_armatus
ENSHCOG00000002074rbm479993.573ENSMZEG00005023659rbm479993.573Maylandia_zebra
ENSHCOG00000002074rbm479981.633ENSMGAG00000012226RBM479977.333Meleagris_gallopavo
ENSHCOG00000002074rbm479981.794ENSMAUG00000006493Rbm4710080.000Mesocricetus_auratus
ENSHCOG00000002074rbm479977.719ENSMICG00000026417RBM479974.958Microcebus_murinus
ENSHCOG00000002074rbm479981.746ENSMOCG00000021170Rbm4710079.375Microtus_ochrogaster
ENSHCOG00000002074rbm479991.514ENSMMOG00000007260rbm479991.514Mola_mola
ENSHCOG00000002074rbm479975.366ENSMODG00000020561-9972.635Monodelphis_domestica
ENSHCOG00000002074rbm479982.609ENSMODG00000007003RBM479977.258Monodelphis_domestica
ENSHCOG00000002074rbm475877.044ENSMODG00000015426-9877.044Monodelphis_domestica
ENSHCOG00000002074rbm479994.087ENSMALG00000005167rbm479991.963Monopterus_albus
ENSHCOG00000002074rbm479981.481MGP_CAROLIEiJ_G0027258Rbm4710079.375Mus_caroli
ENSHCOG00000002074rbm479981.481ENSMUSG00000070780Rbm4710079.375Mus_musculus
ENSHCOG00000002074rbm479981.481MGP_PahariEiJ_G0017040Rbm4710079.375Mus_pahari
ENSHCOG00000002074rbm479981.481MGP_SPRETEiJ_G0028253Rbm4710079.375Mus_spretus
ENSHCOG00000002074rbm479385.352ENSMPUG00000006177RBM479476.294Mustela_putorius_furo
ENSHCOG00000002074rbm479979.389ENSMLUG00000000889RBM479976.678Myotis_lucifugus
ENSHCOG00000002074rbm479979.847ENSNGAG00000003325Rbm479974.875Nannospalax_galili
ENSHCOG00000002074rbm479994.087ENSNBRG00000015092rbm479990.656Neolamprologus_brichardi
ENSHCOG00000002074rbm479981.746ENSNLEG00000017151RBM479584.309Nomascus_leucogenys
ENSHCOG00000002074rbm476688.136ENSMEUG00000009516-9881.235Notamacropus_eugenii
ENSHCOG00000002074rbm478686.250ENSOPRG00000016507-7586.250Ochotona_princeps
ENSHCOG00000002074rbm479384.225ENSODEG00000004873RBM479977.517Octodon_degus
ENSHCOG00000002074rbm479990.594ENSONIG00000009061rbm479990.759Oreochromis_niloticus
ENSHCOG00000002074rbm479981.841ENSOANG00000008978RBM479982.609Ornithorhynchus_anatinus
ENSHCOG00000002074rbm479979.337ENSOCUG00000012034RBM479976.923Oryctolagus_cuniculus
ENSHCOG00000002074rbm479992.308ENSORLG00000005847rbm479992.308Oryzias_latipes
ENSHCOG00000002074rbm479992.308ENSORLG00020005154rbm479992.308Oryzias_latipes_hni
ENSHCOG00000002074rbm479992.308ENSORLG00015000066rbm479992.308Oryzias_latipes_hsok
ENSHCOG00000002074rbm479992.031ENSOMEG00000010730rbm479992.031Oryzias_melastigma
ENSHCOG00000002074rbm479970.034ENSOGAG00000025193-9971.212Otolemur_garnettii
ENSHCOG00000002074rbm479385.352ENSOGAG00000029367-9976.127Otolemur_garnettii
ENSHCOG00000002074rbm479967.347ENSOARG00000012711RBM479969.012Ovis_aries
ENSHCOG00000002074rbm479385.876ENSPPAG00000029763RBM479584.309Pan_paniscus
ENSHCOG00000002074rbm479980.052ENSPPRG00000012873RBM479984.085Panthera_pardus
ENSHCOG00000002074rbm478575.649ENSPTIG00000017046RBM479976.048Panthera_tigris_altaica
ENSHCOG00000002074rbm479981.746ENSPTRG00000016006RBM479584.309Pan_troglodytes
ENSHCOG00000002074rbm479981.746ENSPANG00000005980RBM479584.309Papio_anubis
ENSHCOG00000002074rbm479581.239ENSPKIG00000005037rbm479977.462Paramormyrops_kingsleyae
ENSHCOG00000002074rbm479979.592ENSPKIG00000013431RBM479779.035Paramormyrops_kingsleyae
ENSHCOG00000002074rbm478882.398ENSPSIG00000017516RBM479779.661Pelodiscus_sinensis
ENSHCOG00000002074rbm479592.540ENSPMGG00000018540rbm479990.832Periophthalmus_magnuspinnatus
ENSHCOG00000002074rbm479981.481ENSPEMG00000011088Rbm479975.333Peromyscus_maniculatus_bairdii
ENSHCOG00000002074rbm479991.003ENSPFOG00000007997rbm479991.003Poecilia_formosa
ENSHCOG00000002074rbm479990.746ENSPLAG00000002072rbm479990.746Poecilia_latipinna
ENSHCOG00000002074rbm479990.746ENSPMEG00000017492rbm479990.746Poecilia_mexicana
ENSHCOG00000002074rbm479991.003ENSPREG00000008456rbm479991.003Poecilia_reticulata
ENSHCOG00000002074rbm479375.070ENSPPYG00000014688RBM479768.229Pongo_abelii
ENSHCOG00000002074rbm478879.188ENSPCAG00000011879RBM478083.333Procavia_capensis
ENSHCOG00000002074rbm479583.003ENSPCOG00000023451RBM479975.758Propithecus_coquereli
ENSHCOG00000002074rbm479383.754ENSPVAG00000003812RBM479975.793Pteropus_vampyrus
ENSHCOG00000002074rbm479993.573ENSPNYG00000022868rbm479990.033Pundamilia_nyererei
ENSHCOG00000002074rbm479982.043ENSPNAG00000007940rbm479981.518Pygocentrus_nattereri
ENSHCOG00000002074rbm479979.442ENSRNOG00000002408Rbm479976.254Rattus_norvegicus
ENSHCOG00000002074rbm479981.481ENSRBIG00000039601RBM479584.043Rhinopithecus_bieti
ENSHCOG00000002074rbm479981.481ENSRROG00000044696RBM479584.043Rhinopithecus_roxellana
ENSHCOG00000002074rbm479974.281ENSSBOG00000028475RBM4710080.658Saimiri_boliviensis_boliviensis
ENSHCOG00000002074rbm479982.609ENSSHAG00000017576RBM479982.609Sarcophilus_harrisii
ENSHCOG00000002074rbm479978.239ENSSFOG00015012445rbm479977.741Scleropages_formosus
ENSHCOG00000002074rbm479978.378ENSSFOG00015024101RBM479977.534Scleropages_formosus
ENSHCOG00000002074rbm479993.059ENSSMAG00000009744rbm479991.028Scophthalmus_maximus
ENSHCOG00000002074rbm479994.148ENSSDUG00000022684rbm479992.386Seriola_dumerili
ENSHCOG00000002074rbm479993.893ENSSLDG00000003109rbm479993.401Seriola_lalandi_dorsalis
ENSHCOG00000002074rbm478579.601ENSSARG00000001735RBM477581.818Sorex_araneus
ENSHCOG00000002074rbm479983.333ENSSPUG00000007515RBM479977.066Sphenodon_punctatus
ENSHCOG00000002074rbm479995.887ENSSPAG00000001257rbm479995.887Stegastes_partitus
ENSHCOG00000002074rbm479979.474ENSSSCG00000008796RBM479976.717Sus_scrofa
ENSHCOG00000002074rbm479981.122ENSTGUG00000008705RBM479978.224Taeniopygia_guttata
ENSHCOG00000002074rbm479988.625ENSTRUG00000014050rbm479988.625Takifugu_rubripes
ENSHCOG00000002074rbm479989.351ENSTNIG00000006127rbm479989.351Tetraodon_nigroviridis
ENSHCOG00000002074rbm478184.746ENSTBEG00000001607RBM477681.915Tupaia_belangeri
ENSHCOG00000002074rbm479383.708ENSTTRG00000002839RBM479976.936Tursiops_truncatus
ENSHCOG00000002074rbm479385.634ENSUAMG00000021346RBM479976.461Ursus_americanus
ENSHCOG00000002074rbm475084.800ENSVPAG00000000641-5679.592Vicugna_pacos
ENSHCOG00000002074rbm479381.501ENSVVUG00000014774RBM479975.966Vulpes_vulpes
ENSHCOG00000002074rbm479980.964ENSXETG00000012802rbm479975.544Xenopus_tropicalis
ENSHCOG00000002074rbm479986.778ENSXCOG00000000780rbm479991.200Xiphophorus_couchianus
ENSHCOG00000002074rbm479991.517ENSXMAG00000009874rbm479991.517Xiphophorus_maculatus

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