EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002084 (Gene tree)
Gene ID: 109513723
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 9975 bases
Position: chrKV879869.1:1391187-1401161
Accession: 109513723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001153	IBN_N	PF03810.19	3.4e-11	1	1
ENSHCOP00000001140	IBN_N	PF03810.19	4.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012585	-	3664	XM_019866337	ENSHCOP00000001153	876 (aa)	XP_019721896	UPI00094F1C1B
ENSHCOT00000012591	-	2667	-	ENSHCOP00000001140	888 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000002084's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002084	kpnb1	100	90.868	ENSG00000108424	KPNB1	100	93.333	Homo_sapiens
ENSHCOG00000002084	kpnb1	100	95.205	ENSAPOG00000020572	kpnb1	100	95.205	Acanthochromis_polyacanthus
ENSHCOG00000002084	kpnb1	96	91.114	ENSAMEG00000004613	KPNB1	100	91.114	Ailuropoda_melanoleuca
ENSHCOG00000002084	kpnb1	98	95.210	ENSACIG00000023130	kpnb1	99	95.210	Amphilophus_citrinellus
ENSHCOG00000002084	kpnb1	100	95.205	ENSAOCG00000007048	kpnb1	100	95.205	Amphiprion_ocellaris
ENSHCOG00000002084	kpnb1	100	95.205	ENSAPEG00000008270	kpnb1	100	95.205	Amphiprion_percula
ENSHCOG00000002084	kpnb1	100	94.635	ENSATEG00000015139	kpnb1	100	94.635	Anabas_testudineus
ENSHCOG00000002084	kpnb1	96	90.651	ENSAPLG00000010177	KPNB1	96	90.651	Anas_platyrhynchos
ENSHCOG00000002084	kpnb1	100	91.096	ENSACAG00000007097	KPNB1	100	91.096	Anolis_carolinensis
ENSHCOG00000002084	kpnb1	100	88.128	ENSANAG00000024932	-	99	88.128	Aotus_nancymaae
ENSHCOG00000002084	kpnb1	100	95.091	ENSACLG00000015070	kpnb1	100	95.091	Astatotilapia_calliptera
ENSHCOG00000002084	kpnb1	100	94.521	ENSAMXG00000041903	kpnb1	100	94.521	Astyanax_mexicanus
ENSHCOG00000002084	kpnb1	100	91.210	ENSBTAG00000006586	KPNB1	100	91.210	Bos_taurus
ENSHCOG00000002084	kpnb1	99	47.782	WBGene00002075	imb-1	98	47.782	Caenorhabditis_elegans
ENSHCOG00000002084	kpnb1	100	90.868	ENSCJAG00000007834	KPNB1	100	90.868	Callithrix_jacchus
ENSHCOG00000002084	kpnb1	100	91.210	ENSCAFG00000016678	KPNB1	100	91.210	Canis_familiaris
ENSHCOG00000002084	kpnb1	100	91.210	ENSCAFG00020023205	KPNB1	100	91.210	Canis_lupus_dingo
ENSHCOG00000002084	kpnb1	100	91.210	ENSCHIG00000014896	KPNB1	100	91.210	Capra_hircus
ENSHCOG00000002084	kpnb1	100	89.498	ENSTSYG00000014472	KPNB1	99	89.498	Carlito_syrichta
ENSHCOG00000002084	kpnb1	96	91.340	ENSCAPG00000014185	KPNB1	100	91.340	Cavia_aperea
ENSHCOG00000002084	kpnb1	100	91.210	ENSCPOG00000006566	KPNB1	100	91.210	Cavia_porcellus
ENSHCOG00000002084	kpnb1	100	84.738	ENSCCAG00000029263	-	99	84.738	Cebus_capucinus
ENSHCOG00000002084	kpnb1	100	69.803	ENSCCAG00000018551	-	100	69.803	Cebus_capucinus
ENSHCOG00000002084	kpnb1	100	90.868	ENSCATG00000037124	KPNB1	100	90.868	Cercocebus_atys
ENSHCOG00000002084	kpnb1	100	91.096	ENSCLAG00000017091	KPNB1	100	91.096	Chinchilla_lanigera
ENSHCOG00000002084	kpnb1	100	90.868	ENSCSAG00000002605	KPNB1	100	90.868	Chlorocebus_sabaeus
ENSHCOG00000002084	kpnb1	73	84.906	ENSCHOG00000010604	KPNB1	73	84.906	Choloepus_hoffmanni
ENSHCOG00000002084	kpnb1	99	91.541	ENSCPBG00000027423	KPNB1	94	91.541	Chrysemys_picta_bellii
ENSHCOG00000002084	kpnb1	99	63.398	ENSCING00000004639	-	99	63.398	Ciona_intestinalis
ENSHCOG00000002084	kpnb1	100	60.791	ENSCSAVG00000008624	-	100	60.791	Ciona_savignyi
ENSHCOG00000002084	kpnb1	96	89.826	ENSCANG00000013489	KPNB1	100	89.049	Colobus_angolensis_palliatus
ENSHCOG00000002084	kpnb1	100	91.324	ENSCGRG00001016042	Kpnb1	100	91.324	Cricetulus_griseus_chok1gshd
ENSHCOG00000002084	kpnb1	96	91.459	ENSCGRG00000013910	Kpnb1	100	91.459	Cricetulus_griseus_crigri
ENSHCOG00000002084	kpnb1	97	92.019	ENSCSEG00000007991	kpnb1	100	92.019	Cynoglossus_semilaevis
ENSHCOG00000002084	kpnb1	100	93.493	ENSDARG00000104889	kpnb1	100	93.493	Danio_rerio
ENSHCOG00000002084	kpnb1	99	61.073	FBgn0262743	Fs(2)Ket	99	61.073	Drosophila_melanogaster
ENSHCOG00000002084	kpnb1	99	79.769	ENSEBUG00000013869	kpnb1	99	79.769	Eptatretus_burgeri
ENSHCOG00000002084	kpnb1	100	91.210	ENSEASG00005000805	KPNB1	100	91.210	Equus_asinus_asinus
ENSHCOG00000002084	kpnb1	100	91.210	ENSECAG00000014560	KPNB1	100	91.210	Equus_caballus
ENSHCOG00000002084	kpnb1	85	90.452	ENSEEUG00000005046	KPNB1	88	90.452	Erinaceus_europaeus
ENSHCOG00000002084	kpnb1	100	94.863	ENSELUG00000015847	kpnb1	100	94.863	Esox_lucius
ENSHCOG00000002084	kpnb1	100	91.210	ENSFCAG00000023994	KPNB1	100	91.210	Felis_catus
ENSHCOG00000002084	kpnb1	96	91.578	ENSFDAG00000019923	KPNB1	100	91.578	Fukomys_damarensis
ENSHCOG00000002084	kpnb1	100	94.406	ENSFHEG00000020199	kpnb1	100	94.406	Fundulus_heteroclitus
ENSHCOG00000002084	kpnb1	100	89.498	ENSGMOG00000011607	kpnb1	99	89.498	Gadus_morhua
ENSHCOG00000002084	kpnb1	100	91.096	ENSGALG00000036962	KPNB1	100	91.096	Gallus_gallus
ENSHCOG00000002084	kpnb1	100	94.406	ENSGAFG00000000783	kpnb1	100	94.406	Gambusia_affinis
ENSHCOG00000002084	kpnb1	100	90.795	ENSGACG00000014765	kpnb1	100	90.795	Gasterosteus_aculeatus
ENSHCOG00000002084	kpnb1	96	90.963	ENSGAGG00000023737	KPNB1	92	90.963	Gopherus_agassizii
ENSHCOG00000002084	kpnb1	100	90.868	ENSGGOG00000008089	KPNB1	100	90.868	Gorilla_gorilla
ENSHCOG00000002084	kpnb1	100	95.091	ENSHBUG00000016826	kpnb1	100	95.091	Haplochromis_burtoni
ENSHCOG00000002084	kpnb1	100	91.438	ENSHGLG00000014138	KPNB1	100	91.438	Heterocephalus_glaber_female
ENSHCOG00000002084	kpnb1	96	91.578	ENSHGLG00100006572	KPNB1	100	91.578	Heterocephalus_glaber_male
ENSHCOG00000002084	kpnb1	99	89.919	ENSIPUG00000012402	kpnb1	95	89.919	Ictalurus_punctatus
ENSHCOG00000002084	kpnb1	100	91.438	ENSSTOG00000007896	KPNB1	100	91.438	Ictidomys_tridecemlineatus
ENSHCOG00000002084	kpnb1	100	91.096	ENSJJAG00000010909	Kpnb1	100	91.096	Jaculus_jaculus
ENSHCOG00000002084	kpnb1	100	94.064	ENSKMAG00000001547	kpnb1	100	94.064	Kryptolebias_marmoratus
ENSHCOG00000002084	kpnb1	99	94.348	ENSLBEG00000025794	kpnb1	99	92.515	Labrus_bergylta
ENSHCOG00000002084	kpnb1	88	91.051	ENSLACG00000017620	KPNB1	99	91.051	Latimeria_chalumnae
ENSHCOG00000002084	kpnb1	100	94.064	ENSLOCG00000013753	kpnb1	100	94.064	Lepisosteus_oculatus
ENSHCOG00000002084	kpnb1	100	86.530	ENSLAFG00000001328	KPNB1	100	86.530	Loxodonta_africana
ENSHCOG00000002084	kpnb1	99	88.545	ENSMFAG00000030197	KPNB1	100	90.985	Macaca_fascicularis
ENSHCOG00000002084	kpnb1	99	89.371	ENSMMUG00000019760	KPNB1	99	89.371	Macaca_mulatta
ENSHCOG00000002084	kpnb1	100	90.868	ENSMNEG00000040927	KPNB1	100	90.868	Macaca_nemestrina
ENSHCOG00000002084	kpnb1	100	88.584	ENSMLEG00000038185	KPNB1	99	88.584	Mandrillus_leucophaeus
ENSHCOG00000002084	kpnb1	100	95.091	ENSMAMG00000011036	kpnb1	100	95.091	Mastacembelus_armatus
ENSHCOG00000002084	kpnb1	100	95.091	ENSMZEG00005004564	kpnb1	100	95.091	Maylandia_zebra
ENSHCOG00000002084	kpnb1	55	90.683	ENSMGAG00000002770	-	100	90.683	Meleagris_gallopavo
ENSHCOG00000002084	kpnb1	100	91.324	ENSMAUG00000006211	Kpnb1	100	91.324	Mesocricetus_auratus
ENSHCOG00000002084	kpnb1	100	91.210	ENSMICG00000012059	KPNB1	84	91.210	Microcebus_murinus
ENSHCOG00000002084	kpnb1	100	91.324	ENSMOCG00000003683	Kpnb1	100	91.324	Microtus_ochrogaster
ENSHCOG00000002084	kpnb1	100	91.553	ENSMODG00000012505	KPNB1	100	91.553	Monodelphis_domestica
ENSHCOG00000002084	kpnb1	100	95.091	ENSMALG00000000863	kpnb1	100	95.091	Monopterus_albus
ENSHCOG00000002084	kpnb1	94	91.727	MGP_CAROLIEiJ_G0017050	Kpnb1	100	91.727	Mus_caroli
ENSHCOG00000002084	kpnb1	100	91.324	ENSMUSG00000001440	Kpnb1	100	91.324	Mus_musculus
ENSHCOG00000002084	kpnb1	100	90.194	ENSMPUG00000015220	KPNB1	100	90.194	Mustela_putorius_furo
ENSHCOG00000002084	kpnb1	100	85.893	ENSMLUG00000014522	KPNB1	100	85.893	Myotis_lucifugus
ENSHCOG00000002084	kpnb1	96	91.459	ENSNGAG00000017610	Kpnb1	100	91.459	Nannospalax_galili
ENSHCOG00000002084	kpnb1	100	95.091	ENSNBRG00000019305	kpnb1	100	95.091	Neolamprologus_brichardi
ENSHCOG00000002084	kpnb1	100	90.868	ENSNLEG00000001446	KPNB1	100	90.868	Nomascus_leucogenys
ENSHCOG00000002084	kpnb1	100	86.301	ENSMEUG00000014284	KPNB1	100	86.301	Notamacropus_eugenii
ENSHCOG00000002084	kpnb1	100	91.096	ENSODEG00000017287	KPNB1	100	91.096	Octodon_degus
ENSHCOG00000002084	kpnb1	100	95.205	ENSONIG00000009269	kpnb1	100	95.205	Oreochromis_niloticus
ENSHCOG00000002084	kpnb1	100	91.096	ENSOCUG00000015425	KPNB1	100	91.096	Oryctolagus_cuniculus
ENSHCOG00000002084	kpnb1	100	94.863	ENSORLG00000019936	kpnb1	100	94.863	Oryzias_latipes
ENSHCOG00000002084	kpnb1	100	94.863	ENSORLG00020021181	kpnb1	100	94.863	Oryzias_latipes_hni
ENSHCOG00000002084	kpnb1	100	94.749	ENSORLG00015012177	kpnb1	100	94.749	Oryzias_latipes_hsok
ENSHCOG00000002084	kpnb1	100	94.863	ENSOMEG00000021022	kpnb1	100	94.863	Oryzias_melastigma
ENSHCOG00000002084	kpnb1	100	91.096	ENSOGAG00000006153	KPNB1	100	91.096	Otolemur_garnettii
ENSHCOG00000002084	kpnb1	97	90.515	ENSOARG00000008469	KPNB1	99	90.515	Ovis_aries
ENSHCOG00000002084	kpnb1	100	90.868	ENSPPAG00000028842	KPNB1	100	90.868	Pan_paniscus
ENSHCOG00000002084	kpnb1	97	91.027	ENSPPRG00000022879	KPNB1	97	91.027	Panthera_pardus
ENSHCOG00000002084	kpnb1	97	91.027	ENSPTIG00000006870	KPNB1	97	91.027	Panthera_tigris_altaica
ENSHCOG00000002084	kpnb1	100	90.868	ENSPTRG00000009333	KPNB1	100	90.868	Pan_troglodytes
ENSHCOG00000002084	kpnb1	100	90.868	ENSPANG00000022099	KPNB1	100	90.868	Papio_anubis
ENSHCOG00000002084	kpnb1	100	93.607	ENSPKIG00000017563	kpnb1	100	93.607	Paramormyrops_kingsleyae
ENSHCOG00000002084	kpnb1	96	91.578	ENSPSIG00000009775	KPNB1	100	91.578	Pelodiscus_sinensis
ENSHCOG00000002084	kpnb1	100	87.913	ENSPMGG00000001041	kpnb1	93	87.913	Periophthalmus_magnuspinnatus
ENSHCOG00000002084	kpnb1	100	91.324	ENSPEMG00000017783	Kpnb1	100	91.324	Peromyscus_maniculatus_bairdii
ENSHCOG00000002084	kpnb1	99	83.144	ENSPMAG00000007117	kpnb1	99	83.144	Petromyzon_marinus
ENSHCOG00000002084	kpnb1	100	91.667	ENSPCIG00000001034	KPNB1	100	91.667	Phascolarctos_cinereus
ENSHCOG00000002084	kpnb1	100	94.406	ENSPFOG00000009014	kpnb1	100	94.406	Poecilia_formosa
ENSHCOG00000002084	kpnb1	100	94.406	ENSPLAG00000010922	kpnb1	100	94.406	Poecilia_latipinna
ENSHCOG00000002084	kpnb1	100	94.406	ENSPREG00000012268	kpnb1	100	94.406	Poecilia_reticulata
ENSHCOG00000002084	kpnb1	100	90.411	ENSPPYG00000025935	KPNB1	100	90.411	Pongo_abelii
ENSHCOG00000002084	kpnb1	75	76.667	ENSPCAG00000002526	KPNB1	78	76.667	Procavia_capensis
ENSHCOG00000002084	kpnb1	100	91.210	ENSPCOG00000026259	KPNB1	100	91.210	Propithecus_coquereli
ENSHCOG00000002084	kpnb1	100	90.753	ENSPVAG00000004910	KPNB1	100	90.753	Pteropus_vampyrus
ENSHCOG00000002084	kpnb1	100	90.830	ENSPNYG00000017703	kpnb1	96	95.026	Pundamilia_nyererei
ENSHCOG00000002084	kpnb1	99	86.369	ENSPNAG00000024047	kpnb1	98	86.483	Pygocentrus_nattereri
ENSHCOG00000002084	kpnb1	100	91.324	ENSRNOG00000009275	Kpnb1	100	91.324	Rattus_norvegicus
ENSHCOG00000002084	kpnb1	100	90.753	ENSRBIG00000002254	KPNB1	99	90.753	Rhinopithecus_bieti
ENSHCOG00000002084	kpnb1	99	90.416	ENSRROG00000030419	KPNB1	99	90.416	Rhinopithecus_roxellana
ENSHCOG00000002084	kpnb1	99	34.016	YLR347C	KAP95	99	34.016	Saccharomyces_cerevisiae
ENSHCOG00000002084	kpnb1	100	90.868	ENSSBOG00000030025	KPNB1	94	90.868	Saimiri_boliviensis_boliviensis
ENSHCOG00000002084	kpnb1	96	91.499	ENSSHAG00000018214	KPNB1	100	91.499	Sarcophilus_harrisii
ENSHCOG00000002084	kpnb1	100	94.292	ENSSFOG00015020000	kpnb1	100	94.292	Scleropages_formosus
ENSHCOG00000002084	kpnb1	100	95.320	ENSSDUG00000016218	kpnb1	100	95.320	Seriola_dumerili
ENSHCOG00000002084	kpnb1	98	95.338	ENSSLDG00000021549	kpnb1	97	95.338	Seriola_lalandi_dorsalis
ENSHCOG00000002084	kpnb1	100	90.868	ENSSPUG00000017799	KPNB1	100	90.868	Sphenodon_punctatus
ENSHCOG00000002084	kpnb1	100	95.091	ENSSPAG00000019346	kpnb1	100	95.091	Stegastes_partitus
ENSHCOG00000002084	kpnb1	100	91.210	ENSSSCG00000017514	KPNB1	100	91.210	Sus_scrofa
ENSHCOG00000002084	kpnb1	96	86.002	ENSTGUG00000003387	KPNB1	100	86.002	Taeniopygia_guttata
ENSHCOG00000002084	kpnb1	100	92.123	ENSTRUG00000000542	kpnb1	100	92.123	Takifugu_rubripes
ENSHCOG00000002084	kpnb1	100	93.265	ENSTNIG00000006494	kpnb1	100	93.265	Tetraodon_nigroviridis
ENSHCOG00000002084	kpnb1	96	91.222	ENSTTRG00000004682	KPNB1	100	91.222	Tursiops_truncatus
ENSHCOG00000002084	kpnb1	100	91.210	ENSUAMG00000025344	KPNB1	99	91.210	Ursus_americanus
ENSHCOG00000002084	kpnb1	98	90.116	ENSUMAG00000016471	KPNB1	98	90.116	Ursus_maritimus
ENSHCOG00000002084	kpnb1	100	77.626	ENSVPAG00000003675	KPNB1	100	77.626	Vicugna_pacos
ENSHCOG00000002084	kpnb1	100	91.210	ENSVVUG00000003085	KPNB1	100	91.210	Vulpes_vulpes
ENSHCOG00000002084	kpnb1	100	90.639	ENSXETG00000014717	kpnb1	100	90.639	Xenopus_tropicalis
ENSHCOG00000002084	kpnb1	100	94.292	ENSXMAG00000018792	kpnb1	100	94.292	Xiphophorus_maculatus