EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002094 (Gene tree)
Gene ID: 109513334
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5220 bases
Position: chrKV879858.1:141251-146470
Accession: 109513334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001178	AD	PF09793.9	5.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012544	-	1192	XM_019865696	ENSHCOP00000001178	196 (aa)	XP_019721255	UPI00094EB98C

Gene Model

Click here to download ENSHCOG00000002094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002094	lsm12b	100	84.184	ENSG00000161654	LSM12	100	84.184	Homo_sapiens
ENSHCOG00000002094	lsm12b	100	96.429	ENSAPOG00000007907	lsm12b	100	96.429	Acanthochromis_polyacanthus
ENSHCOG00000002094	lsm12b	100	82.412	ENSAMEG00000018321	LSM12	100	82.412	Ailuropoda_melanoleuca
ENSHCOG00000002094	lsm12b	100	93.878	ENSACIG00000008538	lsm12b	100	93.878	Amphilophus_citrinellus
ENSHCOG00000002094	lsm12b	100	95.918	ENSAOCG00000021847	lsm12b	88	95.918	Amphiprion_ocellaris
ENSHCOG00000002094	lsm12b	100	95.918	ENSAPEG00000002252	lsm12b	100	95.918	Amphiprion_percula
ENSHCOG00000002094	lsm12b	100	94.388	ENSATEG00000005705	lsm12b	100	94.388	Anabas_testudineus
ENSHCOG00000002094	lsm12b	100	83.163	ENSACAG00000004618	LSM12	100	83.163	Anolis_carolinensis
ENSHCOG00000002094	lsm12b	100	84.184	ENSANAG00000029011	LSM12	100	84.184	Aotus_nancymaae
ENSHCOG00000002094	lsm12b	100	94.388	ENSACLG00000026332	lsm12b	100	94.388	Astatotilapia_calliptera
ENSHCOG00000002094	lsm12b	100	92.347	ENSAMXG00000032952	lsm12b	100	92.347	Astyanax_mexicanus
ENSHCOG00000002094	lsm12b	100	85.204	ENSAMXG00000036117	lsm12a	91	85.204	Astyanax_mexicanus
ENSHCOG00000002094	lsm12b	100	84.184	ENSBTAG00000016252	LSM12	100	84.184	Bos_taurus
ENSHCOG00000002094	lsm12b	100	84.184	ENSCJAG00000048480	LSM12	100	84.184	Callithrix_jacchus
ENSHCOG00000002094	lsm12b	100	84.184	ENSCAFG00000014379	LSM12	92	84.184	Canis_familiaris
ENSHCOG00000002094	lsm12b	100	84.184	ENSCAFG00020012173	LSM12	100	84.184	Canis_lupus_dingo
ENSHCOG00000002094	lsm12b	100	84.184	ENSCHIG00000018175	LSM12	100	84.184	Capra_hircus
ENSHCOG00000002094	lsm12b	100	84.184	ENSTSYG00000036361	LSM12	100	84.184	Carlito_syrichta
ENSHCOG00000002094	lsm12b	83	79.630	ENSCAPG00000009647	LSM12	89	79.630	Cavia_aperea
ENSHCOG00000002094	lsm12b	100	83.163	ENSCPOG00000012860	LSM12	100	83.163	Cavia_porcellus
ENSHCOG00000002094	lsm12b	100	84.184	ENSCCAG00000032905	LSM12	100	84.184	Cebus_capucinus
ENSHCOG00000002094	lsm12b	100	84.184	ENSCATG00000030577	-	100	84.184	Cercocebus_atys
ENSHCOG00000002094	lsm12b	100	83.673	ENSCLAG00000015759	LSM12	100	83.673	Chinchilla_lanigera
ENSHCOG00000002094	lsm12b	100	84.694	ENSCSAG00000003486	LSM12	100	84.694	Chlorocebus_sabaeus
ENSHCOG00000002094	lsm12b	56	83.486	ENSCHOG00000001198	LSM12	100	83.486	Choloepus_hoffmanni
ENSHCOG00000002094	lsm12b	100	84.694	ENSCPBG00000027105	LSM12	100	84.694	Chrysemys_picta_bellii
ENSHCOG00000002094	lsm12b	100	84.184	ENSCANG00000043328	LSM12	100	84.184	Colobus_angolensis_palliatus
ENSHCOG00000002094	lsm12b	100	84.184	ENSCGRG00001002094	Lsm12	100	84.184	Cricetulus_griseus_chok1gshd
ENSHCOG00000002094	lsm12b	86	77.976	ENSCGRG00000004316	Lsm12	95	77.976	Cricetulus_griseus_crigri
ENSHCOG00000002094	lsm12b	100	95.408	ENSCSEG00000008434	lsm12b	100	95.408	Cynoglossus_semilaevis
ENSHCOG00000002094	lsm12b	100	95.408	ENSCVAG00000008755	lsm12b	100	95.408	Cyprinodon_variegatus
ENSHCOG00000002094	lsm12b	100	93.367	ENSDARG00000109510	lsm12b	100	93.367	Danio_rerio
ENSHCOG00000002094	lsm12b	100	88.776	ENSDARG00000028848	lsm12a	100	88.776	Danio_rerio
ENSHCOG00000002094	lsm12b	100	84.184	ENSDNOG00000002418	LSM12	91	84.184	Dasypus_novemcinctus
ENSHCOG00000002094	lsm12b	100	84.184	ENSDORG00000016381	Lsm12	100	84.184	Dipodomys_ordii
ENSHCOG00000002094	lsm12b	83	34.940	FBgn0030364	Lsm12	76	34.940	Drosophila_melanogaster
ENSHCOG00000002094	lsm12b	100	83.673	ENSETEG00000008374	LSM12	100	83.673	Echinops_telfairi
ENSHCOG00000002094	lsm12b	89	75.287	ENSETEG00000011012	-	99	75.287	Echinops_telfairi
ENSHCOG00000002094	lsm12b	85	66.467	ENSEBUG00000016299	lsm12a	92	66.467	Eptatretus_burgeri
ENSHCOG00000002094	lsm12b	100	84.184	ENSEASG00005010155	LSM12	100	84.184	Equus_asinus_asinus
ENSHCOG00000002094	lsm12b	100	84.184	ENSECAG00000009071	LSM12	100	84.184	Equus_caballus
ENSHCOG00000002094	lsm12b	78	83.660	ENSEEUG00000002419	-	100	83.660	Erinaceus_europaeus
ENSHCOG00000002094	lsm12b	100	91.327	ENSELUG00000000256	-	100	91.327	Esox_lucius
ENSHCOG00000002094	lsm12b	100	93.878	ENSELUG00000015538	lsm12b	100	89.286	Esox_lucius
ENSHCOG00000002094	lsm12b	100	84.184	ENSFCAG00000037021	LSM12	100	84.184	Felis_catus
ENSHCOG00000002094	lsm12b	92	71.111	ENSFDAG00000008954	LSM12	99	71.111	Fukomys_damarensis
ENSHCOG00000002094	lsm12b	100	95.408	ENSFHEG00000019913	lsm12b	100	95.408	Fundulus_heteroclitus
ENSHCOG00000002094	lsm12b	81	95.570	ENSGMOG00000015449	lsm12b	100	95.570	Gadus_morhua
ENSHCOG00000002094	lsm12b	78	84.314	ENSGALG00000039803	LSM12	100	84.314	Gallus_gallus
ENSHCOG00000002094	lsm12b	100	94.898	ENSGAFG00000011829	lsm12b	100	94.898	Gambusia_affinis
ENSHCOG00000002094	lsm12b	81	94.937	ENSGACG00000003428	lsm12b	100	94.937	Gasterosteus_aculeatus
ENSHCOG00000002094	lsm12b	100	83.673	ENSGAGG00000021965	LSM12	100	83.673	Gopherus_agassizii
ENSHCOG00000002094	lsm12b	100	84.184	ENSGGOG00000010589	-	100	84.184	Gorilla_gorilla
ENSHCOG00000002094	lsm12b	85	93.413	ENSHBUG00000007667	lsm12b	74	93.413	Haplochromis_burtoni
ENSHCOG00000002094	lsm12b	100	84.184	ENSHGLG00000011411	LSM12	100	84.184	Heterocephalus_glaber_female
ENSHCOG00000002094	lsm12b	90	72.928	ENSHGLG00100000241	LSM12	96	72.928	Heterocephalus_glaber_male
ENSHCOG00000002094	lsm12b	99	81.443	ENSIPUG00000008936	lsm12a	99	81.443	Ictalurus_punctatus
ENSHCOG00000002094	lsm12b	100	91.837	ENSIPUG00000014800	lsm12	100	91.837	Ictalurus_punctatus
ENSHCOG00000002094	lsm12b	100	84.184	ENSSTOG00000007403	LSM12	100	84.184	Ictidomys_tridecemlineatus
ENSHCOG00000002094	lsm12b	96	75.789	ENSJJAG00000011793	-	100	75.789	Jaculus_jaculus
ENSHCOG00000002094	lsm12b	80	71.698	ENSJJAG00000014652	-	95	71.698	Jaculus_jaculus
ENSHCOG00000002094	lsm12b	100	83.163	ENSJJAG00000004364	-	100	83.163	Jaculus_jaculus
ENSHCOG00000002094	lsm12b	85	94.012	ENSKMAG00000007704	lsm12b	56	94.012	Kryptolebias_marmoratus
ENSHCOG00000002094	lsm12b	100	96.429	ENSLBEG00000027999	lsm12b	100	96.429	Labrus_bergylta
ENSHCOG00000002094	lsm12b	100	86.224	ENSLACG00000015981	LSM12	100	86.224	Latimeria_chalumnae
ENSHCOG00000002094	lsm12b	100	89.796	ENSLOCG00000013079	lsm12b	99	89.796	Lepisosteus_oculatus
ENSHCOG00000002094	lsm12b	100	84.184	ENSLAFG00000005202	LSM12	100	84.184	Loxodonta_africana
ENSHCOG00000002094	lsm12b	100	84.184	ENSMFAG00000031376	LSM12	100	84.184	Macaca_fascicularis
ENSHCOG00000002094	lsm12b	65	72.414	ENSMMUG00000042106	-	100	72.414	Macaca_mulatta
ENSHCOG00000002094	lsm12b	65	72.414	ENSMMUG00000038408	-	100	72.414	Macaca_mulatta
ENSHCOG00000002094	lsm12b	100	84.184	ENSMMUG00000006804	LSM12	100	84.184	Macaca_mulatta
ENSHCOG00000002094	lsm12b	100	84.184	ENSMNEG00000030594	-	100	84.184	Macaca_nemestrina
ENSHCOG00000002094	lsm12b	100	84.184	ENSMLEG00000039934	LSM12	100	84.184	Mandrillus_leucophaeus
ENSHCOG00000002094	lsm12b	100	95.408	ENSMAMG00000004279	lsm12b	100	95.408	Mastacembelus_armatus
ENSHCOG00000002094	lsm12b	100	94.388	ENSMZEG00005005754	lsm12b	100	94.388	Maylandia_zebra
ENSHCOG00000002094	lsm12b	100	84.694	ENSMICG00000037219	LSM12	100	84.694	Microcebus_murinus
ENSHCOG00000002094	lsm12b	100	72.449	ENSMOCG00000017015	-	86	72.449	Microtus_ochrogaster
ENSHCOG00000002094	lsm12b	100	84.184	ENSMOCG00000019878	-	100	84.184	Microtus_ochrogaster
ENSHCOG00000002094	lsm12b	100	95.408	ENSMMOG00000020848	lsm12b	100	95.408	Mola_mola
ENSHCOG00000002094	lsm12b	100	95.408	ENSMALG00000007578	lsm12b	100	95.408	Monopterus_albus
ENSHCOG00000002094	lsm12b	100	83.673	MGP_CAROLIEiJ_G0017241	Lsm12	100	83.673	Mus_caroli
ENSHCOG00000002094	lsm12b	100	84.184	ENSMUSG00000020922	Lsm12	100	84.184	Mus_musculus
ENSHCOG00000002094	lsm12b	100	77.465	MGP_PahariEiJ_G0018371	Lsm12	100	83.636	Mus_pahari
ENSHCOG00000002094	lsm12b	100	83.673	MGP_SPRETEiJ_G0018084	Lsm12	100	83.673	Mus_spretus
ENSHCOG00000002094	lsm12b	100	84.694	ENSMLUG00000006391	LSM12	100	84.694	Myotis_lucifugus
ENSHCOG00000002094	lsm12b	100	57.635	ENSNGAG00000015429	-	100	57.635	Nannospalax_galili
ENSHCOG00000002094	lsm12b	100	84.184	ENSNGAG00000001870	Lsm12	100	84.184	Nannospalax_galili
ENSHCOG00000002094	lsm12b	100	94.388	ENSNBRG00000006266	lsm12b	100	94.388	Neolamprologus_brichardi
ENSHCOG00000002094	lsm12b	100	84.184	ENSNLEG00000005580	-	100	84.184	Nomascus_leucogenys
ENSHCOG00000002094	lsm12b	85	83.735	ENSMEUG00000007501	-	100	83.735	Notamacropus_eugenii
ENSHCOG00000002094	lsm12b	100	84.184	ENSOPRG00000008552	LSM12	100	84.184	Ochotona_princeps
ENSHCOG00000002094	lsm12b	99	84.021	ENSODEG00000017998	-	99	84.021	Octodon_degus
ENSHCOG00000002094	lsm12b	100	77.041	ENSODEG00000007886	-	74	77.041	Octodon_degus
ENSHCOG00000002094	lsm12b	100	94.388	ENSONIG00000007933	lsm12b	100	94.388	Oreochromis_niloticus
ENSHCOG00000002094	lsm12b	99	79.487	ENSOCUG00000021254	-	100	79.487	Oryctolagus_cuniculus
ENSHCOG00000002094	lsm12b	100	82.412	ENSOCUG00000008566	-	100	82.412	Oryctolagus_cuniculus
ENSHCOG00000002094	lsm12b	99	77.949	ENSOCUG00000024823	-	100	77.949	Oryctolagus_cuniculus
ENSHCOG00000002094	lsm12b	99	78.462	ENSOCUG00000027889	-	100	78.462	Oryctolagus_cuniculus
ENSHCOG00000002094	lsm12b	100	95.408	ENSORLG00000011310	lsm12b	100	95.408	Oryzias_latipes
ENSHCOG00000002094	lsm12b	100	95.408	ENSORLG00020002060	lsm12b	92	95.408	Oryzias_latipes_hni
ENSHCOG00000002094	lsm12b	100	95.408	ENSORLG00015001647	lsm12b	92	95.408	Oryzias_latipes_hsok
ENSHCOG00000002094	lsm12b	100	95.408	ENSOMEG00000006184	lsm12b	92	95.408	Oryzias_melastigma
ENSHCOG00000002094	lsm12b	100	84.694	ENSOGAG00000010489	LSM12	100	84.694	Otolemur_garnettii
ENSHCOG00000002094	lsm12b	100	81.188	ENSOARG00000006589	LSM12	100	81.188	Ovis_aries
ENSHCOG00000002094	lsm12b	100	74.490	ENSPPAG00000034974	-	100	74.490	Pan_paniscus
ENSHCOG00000002094	lsm12b	100	84.184	ENSPPRG00000023420	LSM12	100	84.184	Panthera_pardus
ENSHCOG00000002094	lsm12b	78	83.660	ENSPTIG00000012704	-	82	83.660	Panthera_tigris_altaica
ENSHCOG00000002094	lsm12b	72	81.818	ENSPTIG00000014850	-	100	81.818	Panthera_tigris_altaica
ENSHCOG00000002094	lsm12b	100	84.184	ENSPTRG00000009261	LSM12	100	84.184	Pan_troglodytes
ENSHCOG00000002094	lsm12b	100	84.184	ENSPANG00000021315	-	100	84.184	Papio_anubis
ENSHCOG00000002094	lsm12b	100	83.163	ENSPKIG00000017932	-	100	83.163	Paramormyrops_kingsleyae
ENSHCOG00000002094	lsm12b	100	93.878	ENSPKIG00000021058	lsm12b	100	93.878	Paramormyrops_kingsleyae
ENSHCOG00000002094	lsm12b	100	94.388	ENSPMGG00000021344	lsm12b	100	94.388	Periophthalmus_magnuspinnatus
ENSHCOG00000002094	lsm12b	100	84.184	ENSPEMG00000012199	Lsm12	100	84.184	Peromyscus_maniculatus_bairdii
ENSHCOG00000002094	lsm12b	89	68.000	ENSPMAG00000005461	lsm12a	99	68.000	Petromyzon_marinus
ENSHCOG00000002094	lsm12b	100	84.184	ENSPCIG00000020244	LSM12	100	84.184	Phascolarctos_cinereus
ENSHCOG00000002094	lsm12b	100	94.898	ENSPFOG00000015930	lsm12b	100	94.898	Poecilia_formosa
ENSHCOG00000002094	lsm12b	100	94.898	ENSPLAG00000021089	lsm12b	100	94.898	Poecilia_latipinna
ENSHCOG00000002094	lsm12b	100	94.898	ENSPMEG00000012961	lsm12b	100	94.898	Poecilia_mexicana
ENSHCOG00000002094	lsm12b	87	95.322	ENSPREG00000010236	lsm12b	95	95.322	Poecilia_reticulata
ENSHCOG00000002094	lsm12b	100	84.184	ENSPPYG00000008344	LSM12	100	84.184	Pongo_abelii
ENSHCOG00000002094	lsm12b	81	84.277	ENSPCAG00000008790	LSM12	100	84.277	Procavia_capensis
ENSHCOG00000002094	lsm12b	100	84.184	ENSPCOG00000027951	LSM12	100	84.184	Propithecus_coquereli
ENSHCOG00000002094	lsm12b	100	83.673	ENSPVAG00000013706	LSM12	100	83.673	Pteropus_vampyrus
ENSHCOG00000002094	lsm12b	100	94.388	ENSPNYG00000003386	lsm12b	100	94.388	Pundamilia_nyererei
ENSHCOG00000002094	lsm12b	100	91.837	ENSPNAG00000004186	lsm12b	100	91.837	Pygocentrus_nattereri
ENSHCOG00000002094	lsm12b	100	84.694	ENSPNAG00000018435	lsm12a	100	84.694	Pygocentrus_nattereri
ENSHCOG00000002094	lsm12b	100	84.184	ENSRNOG00000020894	Lsm12	100	84.184	Rattus_norvegicus
ENSHCOG00000002094	lsm12b	100	84.184	ENSRBIG00000027910	LSM12	100	84.184	Rhinopithecus_bieti
ENSHCOG00000002094	lsm12b	97	52.880	ENSRROG00000000537	-	97	52.880	Rhinopithecus_roxellana
ENSHCOG00000002094	lsm12b	100	84.184	ENSRROG00000045530	-	100	84.184	Rhinopithecus_roxellana
ENSHCOG00000002094	lsm12b	100	84.184	ENSSBOG00000025310	LSM12	100	84.184	Saimiri_boliviensis_boliviensis
ENSHCOG00000002094	lsm12b	81	82.278	ENSSHAG00000014914	LSM12	100	82.278	Sarcophilus_harrisii
ENSHCOG00000002094	lsm12b	100	91.837	ENSSFOG00015009612	lsm12	100	91.837	Scleropages_formosus
ENSHCOG00000002094	lsm12b	100	94.388	ENSSFOG00015020392	lsm12a	100	94.388	Scleropages_formosus
ENSHCOG00000002094	lsm12b	100	95.408	ENSSMAG00000008089	lsm12b	100	95.408	Scophthalmus_maximus
ENSHCOG00000002094	lsm12b	100	95.408	ENSSDUG00000012711	lsm12b	100	95.408	Seriola_dumerili
ENSHCOG00000002094	lsm12b	100	95.408	ENSSLDG00000007404	lsm12b	100	95.408	Seriola_lalandi_dorsalis
ENSHCOG00000002094	lsm12b	78	83.007	ENSSARG00000005537	LSM12	100	83.007	Sorex_araneus
ENSHCOG00000002094	lsm12b	100	84.694	ENSSPUG00000011984	LSM12	100	84.694	Sphenodon_punctatus
ENSHCOG00000002094	lsm12b	100	95.918	ENSSPAG00000017058	lsm12b	100	95.918	Stegastes_partitus
ENSHCOG00000002094	lsm12b	100	84.184	ENSSSCG00000032394	LSM12	100	84.184	Sus_scrofa
ENSHCOG00000002094	lsm12b	100	94.388	ENSTRUG00000007121	lsm12b	100	94.388	Takifugu_rubripes
ENSHCOG00000002094	lsm12b	100	95.408	ENSTNIG00000014436	lsm12b	100	95.408	Tetraodon_nigroviridis
ENSHCOG00000002094	lsm12b	100	81.633	ENSTBEG00000012392	-	100	81.633	Tupaia_belangeri
ENSHCOG00000002094	lsm12b	100	83.673	ENSTBEG00000012523	-	100	83.673	Tupaia_belangeri
ENSHCOG00000002094	lsm12b	100	84.184	ENSTTRG00000010433	LSM12	100	84.184	Tursiops_truncatus
ENSHCOG00000002094	lsm12b	100	84.184	ENSUAMG00000006313	LSM12	100	84.184	Ursus_americanus
ENSHCOG00000002094	lsm12b	81	81.013	ENSUMAG00000012987	LSM12	90	81.013	Ursus_maritimus
ENSHCOG00000002094	lsm12b	100	79.592	ENSVPAG00000011145	LSM12	100	79.592	Vicugna_pacos
ENSHCOG00000002094	lsm12b	100	84.184	ENSVVUG00000017581	LSM12	100	84.184	Vulpes_vulpes
ENSHCOG00000002094	lsm12b	82	59.375	ENSXETG00000003371	lsm12	77	59.375	Xenopus_tropicalis
ENSHCOG00000002094	lsm12b	100	94.898	ENSXCOG00000003994	lsm12b	100	94.898	Xiphophorus_couchianus
ENSHCOG00000002094	lsm12b	100	94.898	ENSXMAG00000020950	lsm12b	100	94.898	Xiphophorus_maculatus