EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002107 (Gene tree)
Gene ID: 109510182
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 67537 bases
Position: chrKV880528.1:532909-600445
Accession: 109510182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001181	PPR	PF01535.20	1.3e-31	1	3
ENSHCOP00000001181	PPR	PF01535.20	1.3e-31	2	3
ENSHCOP00000001181	PPR	PF01535.20	1.3e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012539	-	4205	XM_019860325	ENSHCOP00000001181	1379 (aa)	XP_019715884	-

Gene Model

Click here to download ENSHCOG00000002107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002107's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002107	lrpprc	100	72.218	ENSAPOG00000016610	lrpprc	99	72.218	Acanthochromis_polyacanthus
ENSHCOG00000002107	lrpprc	96	49.851	ENSAMEG00000005852	LRPPRC	98	49.851	Ailuropoda_melanoleuca
ENSHCOG00000002107	lrpprc	100	69.326	ENSACIG00000009604	lrpprc	97	69.326	Amphilophus_citrinellus
ENSHCOG00000002107	lrpprc	100	72.994	ENSAOCG00000005886	lrpprc	97	72.994	Amphiprion_ocellaris
ENSHCOG00000002107	lrpprc	100	68.611	ENSAPEG00000002937	lrpprc	97	68.611	Amphiprion_percula
ENSHCOG00000002107	lrpprc	92	70.898	ENSATEG00000010555	lrpprc	95	71.941	Anabas_testudineus
ENSHCOG00000002107	lrpprc	95	55.019	ENSACAG00000029278	LRPPRC	96	54.668	Anolis_carolinensis
ENSHCOG00000002107	lrpprc	96	51.652	ENSANAG00000027440	LRPPRC	89	58.071	Aotus_nancymaae
ENSHCOG00000002107	lrpprc	96	66.592	ENSACLG00000023712	lrpprc	92	75.738	Astatotilapia_calliptera
ENSHCOG00000002107	lrpprc	96	51.276	ENSCJAG00000000794	LRPPRC	89	57.862	Callithrix_jacchus
ENSHCOG00000002107	lrpprc	96	51.502	ENSCHIG00000020173	LRPPRC	99	50.501	Capra_hircus
ENSHCOG00000002107	lrpprc	95	40.150	ENSCAPG00000013631	LRPPRC	97	40.150	Cavia_aperea
ENSHCOG00000002107	lrpprc	86	48.189	ENSCPOG00000000204	LRPPRC	97	48.189	Cavia_porcellus
ENSHCOG00000002107	lrpprc	100	50.072	ENSCCAG00000031900	LRPPRC	97	54.953	Cebus_capucinus
ENSHCOG00000002107	lrpprc	100	49.784	ENSCATG00000014187	LRPPRC	97	53.745	Cercocebus_atys
ENSHCOG00000002107	lrpprc	100	48.387	ENSCLAG00000005203	LRPPRC	99	48.387	Chinchilla_lanigera
ENSHCOG00000002107	lrpprc	96	51.165	ENSCSAG00000013233	LRPPRC	98	50.036	Chlorocebus_sabaeus
ENSHCOG00000002107	lrpprc	84	49.889	ENSCHOG00000003631	LRPPRC	82	49.889	Choloepus_hoffmanni
ENSHCOG00000002107	lrpprc	96	49.254	ENSCANG00000034961	LRPPRC	95	70.721	Colobus_angolensis_palliatus
ENSHCOG00000002107	lrpprc	100	48.884	ENSCGRG00001016261	Lrpprc	98	48.847	Cricetulus_griseus_chok1gshd
ENSHCOG00000002107	lrpprc	100	48.884	ENSCGRG00000004072	Lrpprc	98	48.847	Cricetulus_griseus_crigri
ENSHCOG00000002107	lrpprc	100	51.897	ENSCSEG00000003850	lrpprc	96	57.617	Cynoglossus_semilaevis
ENSHCOG00000002107	lrpprc	100	71.902	ENSCVAG00000012967	lrpprc	97	71.902	Cyprinodon_variegatus
ENSHCOG00000002107	lrpprc	100	57.143	ENSDARG00000043970	lrpprc	96	57.143	Danio_rerio
ENSHCOG00000002107	lrpprc	79	41.508	ENSDNOG00000032336	-	95	41.508	Dasypus_novemcinctus
ENSHCOG00000002107	lrpprc	100	50.179	ENSDNOG00000012594	-	98	50.179	Dasypus_novemcinctus
ENSHCOG00000002107	lrpprc	96	51.190	ENSDORG00000012233	Lrpprc	96	51.187	Dipodomys_ordii
ENSHCOG00000002107	lrpprc	95	50.643	ENSETEG00000006657	LRPPRC	98	49.245	Echinops_telfairi
ENSHCOG00000002107	lrpprc	89	42.641	ENSEEUG00000012340	LRPPRC	93	42.641	Erinaceus_europaeus
ENSHCOG00000002107	lrpprc	95	58.797	ENSELUG00000012803	lrpprc	97	58.797	Esox_lucius
ENSHCOG00000002107	lrpprc	100	50.863	ENSFCAG00000013468	LRPPRC	98	51.044	Felis_catus
ENSHCOG00000002107	lrpprc	94	48.889	ENSFALG00000012738	LRPPRC	98	48.889	Ficedula_albicollis
ENSHCOG00000002107	lrpprc	100	47.742	ENSFDAG00000015328	LRPPRC	98	47.742	Fukomys_damarensis
ENSHCOG00000002107	lrpprc	100	71.315	ENSFHEG00000019604	lrpprc	99	71.315	Fundulus_heteroclitus
ENSHCOG00000002107	lrpprc	100	62.509	ENSGMOG00000008337	lrpprc	97	62.509	Gadus_morhua
ENSHCOG00000002107	lrpprc	100	71.315	ENSGAFG00000001455	lrpprc	98	71.315	Gambusia_affinis
ENSHCOG00000002107	lrpprc	100	68.858	ENSGACG00000010679	lrpprc	97	71.222	Gasterosteus_aculeatus
ENSHCOG00000002107	lrpprc	100	73.882	ENSHBUG00000000393	lrpprc	95	73.882	Haplochromis_burtoni
ENSHCOG00000002107	lrpprc	100	47.674	ENSHGLG00000006123	LRPPRC	98	47.674	Heterocephalus_glaber_female
ENSHCOG00000002107	lrpprc	58	46.411	ENSHGLG00100005960	-	96	46.411	Heterocephalus_glaber_male
ENSHCOG00000002107	lrpprc	100	60.916	ENSIPUG00000009406	lrpprc	98	60.916	Ictalurus_punctatus
ENSHCOG00000002107	lrpprc	96	50.521	ENSSTOG00000011185	LRPPRC	95	50.521	Ictidomys_tridecemlineatus
ENSHCOG00000002107	lrpprc	96	49.587	ENSJJAG00000020475	Lrpprc	97	49.007	Jaculus_jaculus
ENSHCOG00000002107	lrpprc	99	62.023	ENSKMAG00000003287	lrpprc	84	62.023	Kryptolebias_marmoratus
ENSHCOG00000002107	lrpprc	100	63.075	ENSLBEG00000023225	lrpprc	96	71.401	Labrus_bergylta
ENSHCOG00000002107	lrpprc	100	56.553	ENSLACG00000014030	LRPPRC	99	56.553	Latimeria_chalumnae
ENSHCOG00000002107	lrpprc	100	61.064	ENSLOCG00000016390	lrpprc	96	61.064	Lepisosteus_oculatus
ENSHCOG00000002107	lrpprc	100	47.897	ENSLAFG00000008614	LRPPRC	98	47.969	Loxodonta_africana
ENSHCOG00000002107	lrpprc	96	50.788	ENSMFAG00000041560	LRPPRC	95	74.129	Macaca_fascicularis
ENSHCOG00000002107	lrpprc	96	49.962	ENSMMUG00000019841	LRPPRC	95	74.129	Macaca_mulatta
ENSHCOG00000002107	lrpprc	100	49.892	ENSMNEG00000031613	LRPPRC	97	53.558	Macaca_nemestrina
ENSHCOG00000002107	lrpprc	100	63.591	ENSMAMG00000021835	lrpprc	97	63.591	Mastacembelus_armatus
ENSHCOG00000002107	lrpprc	100	74.026	ENSMZEG00005027379	lrpprc	99	74.026	Maylandia_zebra
ENSHCOG00000002107	lrpprc	100	48.705	ENSMAUG00000012118	Lrpprc	98	48.668	Mesocricetus_auratus
ENSHCOG00000002107	lrpprc	100	50.611	ENSMICG00000010486	LRPPRC	97	54.664	Microcebus_murinus
ENSHCOG00000002107	lrpprc	100	49.748	ENSMOCG00000006048	Lrpprc	98	49.748	Microtus_ochrogaster
ENSHCOG00000002107	lrpprc	100	67.464	ENSMMOG00000007830	lrpprc	100	69.358	Mola_mola
ENSHCOG00000002107	lrpprc	95	50.604	ENSMODG00000000648	LRPPRC	98	50.604	Monodelphis_domestica
ENSHCOG00000002107	lrpprc	100	69.120	ENSMALG00000001271	lrpprc	97	69.120	Monopterus_albus
ENSHCOG00000002107	lrpprc	97	50.550	ENSMPUG00000011800	LRPPRC	100	51.967	Mustela_putorius_furo
ENSHCOG00000002107	lrpprc	97	50.625	ENSMLUG00000010575	LRPPRC	96	50.966	Myotis_lucifugus
ENSHCOG00000002107	lrpprc	100	49.462	ENSNGAG00000013069	Lrpprc	98	49.462	Nannospalax_galili
ENSHCOG00000002107	lrpprc	89	75.467	ENSNBRG00000013202	lrpprc	97	75.467	Neolamprologus_brichardi
ENSHCOG00000002107	lrpprc	100	49.177	ENSNLEG00000016782	LRPPRC	100	52.753	Nomascus_leucogenys
ENSHCOG00000002107	lrpprc	88	48.750	ENSOPRG00000016774	LRPPRC	90	45.368	Ochotona_princeps
ENSHCOG00000002107	lrpprc	97	49.082	ENSODEG00000011211	LRPPRC	96	49.219	Octodon_degus
ENSHCOG00000002107	lrpprc	100	74.026	ENSONIG00000000917	lrpprc	98	72.773	Oreochromis_niloticus
ENSHCOG00000002107	lrpprc	55	47.804	ENSOANG00000014670	-	100	47.804	Ornithorhynchus_anatinus
ENSHCOG00000002107	lrpprc	100	50.395	ENSOCUG00000015046	LRPPRC	93	50.611	Oryctolagus_cuniculus
ENSHCOG00000002107	lrpprc	100	66.691	ENSORLG00000004605	lrpprc	94	66.499	Oryzias_latipes
ENSHCOG00000002107	lrpprc	91	70.929	ENSORLG00020012536	lrpprc	98	70.436	Oryzias_latipes_hni
ENSHCOG00000002107	lrpprc	94	71.845	ENSORLG00015018270	lrpprc	96	71.845	Oryzias_latipes_hsok
ENSHCOG00000002107	lrpprc	96	51.128	ENSOGAG00000012798	LRPPRC	98	49.928	Otolemur_garnettii
ENSHCOG00000002107	lrpprc	95	51.545	ENSOARG00000006522	LRPPRC	98	50.501	Ovis_aries
ENSHCOG00000002107	lrpprc	100	48.244	ENSPPAG00000040876	LRPPRC	97	53.172	Pan_paniscus
ENSHCOG00000002107	lrpprc	100	50.755	ENSPPRG00000006578	LRPPRC	98	50.935	Panthera_pardus
ENSHCOG00000002107	lrpprc	96	51.955	ENSPTIG00000000933	LRPPRC	95	51.955	Panthera_tigris_altaica
ENSHCOG00000002107	lrpprc	100	49.174	ENSPTRG00000011880	LRPPRC	97	52.996	Pan_troglodytes
ENSHCOG00000002107	lrpprc	100	49.569	ENSPANG00000020731	LRPPRC	97	53.371	Papio_anubis
ENSHCOG00000002107	lrpprc	89	60.538	ENSPKIG00000022232	lrpprc	97	56.202	Paramormyrops_kingsleyae
ENSHCOG00000002107	lrpprc	60	53.892	ENSPSIG00000006830	-	97	54.096	Pelodiscus_sinensis
ENSHCOG00000002107	lrpprc	66	63.286	ENSPMGG00000016597	lrpprc	93	63.286	Periophthalmus_magnuspinnatus
ENSHCOG00000002107	lrpprc	93	45.965	ENSPMAG00000002147	lrpprc	99	45.888	Petromyzon_marinus
ENSHCOG00000002107	lrpprc	100	70.448	ENSPFOG00000011227	lrpprc	98	70.448	Poecilia_formosa
ENSHCOG00000002107	lrpprc	100	70.303	ENSPLAG00000004018	lrpprc	98	70.303	Poecilia_latipinna
ENSHCOG00000002107	lrpprc	100	70.376	ENSPMEG00000016425	lrpprc	98	70.376	Poecilia_mexicana
ENSHCOG00000002107	lrpprc	100	70.014	ENSPREG00000003662	lrpprc	98	70.014	Poecilia_reticulata
ENSHCOG00000002107	lrpprc	56	47.165	ENSPPYG00000029532	-	96	47.165	Pongo_abelii
ENSHCOG00000002107	lrpprc	80	53.309	ENSPCAG00000001430	LRPPRC	79	54.074	Procavia_capensis
ENSHCOG00000002107	lrpprc	100	48.058	ENSPVAG00000002007	LRPPRC	98	48.058	Pteropus_vampyrus
ENSHCOG00000002107	lrpprc	100	63.532	ENSPNYG00000000756	lrpprc	90	74.364	Pundamilia_nyererei
ENSHCOG00000002107	lrpprc	100	63.837	ENSPNAG00000002895	lrpprc	97	63.837	Pygocentrus_nattereri
ENSHCOG00000002107	lrpprc	95	50.608	ENSRNOG00000005877	Lrpprc	97	49.854	Rattus_norvegicus
ENSHCOG00000002107	lrpprc	100	48.782	ENSRBIG00000031552	LRPPRC	98	48.890	Rhinopithecus_bieti
ENSHCOG00000002107	lrpprc	99	50.757	ENSSBOG00000011807	LRPPRC	97	55.514	Saimiri_boliviensis_boliviensis
ENSHCOG00000002107	lrpprc	95	49.962	ENSSHAG00000018725	LRPPRC	97	49.962	Sarcophilus_harrisii
ENSHCOG00000002107	lrpprc	100	54.958	ENSSFOG00015001042	lrpprc	97	54.958	Scleropages_formosus
ENSHCOG00000002107	lrpprc	100	72.182	ENSSDUG00000019062	lrpprc	97	72.182	Seriola_dumerili
ENSHCOG00000002107	lrpprc	100	66.667	ENSSLDG00000023028	lrpprc	97	59.438	Seriola_lalandi_dorsalis
ENSHCOG00000002107	lrpprc	88	49.389	ENSSARG00000000426	LRPPRC	99	49.389	Sorex_araneus
ENSHCOG00000002107	lrpprc	100	63.915	ENSSPAG00000000162	lrpprc	97	63.915	Stegastes_partitus
ENSHCOG00000002107	lrpprc	96	50.852	ENSSSCG00000008452	LRPPRC	96	50.852	Sus_scrofa
ENSHCOG00000002107	lrpprc	93	47.836	ENSTGUG00000003759	LRPPRC	99	47.836	Taeniopygia_guttata
ENSHCOG00000002107	lrpprc	93	68.779	ENSTRUG00000008409	lrpprc	96	68.667	Takifugu_rubripes
ENSHCOG00000002107	lrpprc	100	67.583	ENSTNIG00000007470	lrpprc	97	68.608	Tetraodon_nigroviridis
ENSHCOG00000002107	lrpprc	96	50.112	ENSTTRG00000006403	LRPPRC	95	50.112	Tursiops_truncatus
ENSHCOG00000002107	lrpprc	95	48.558	ENSVPAG00000008993	LRPPRC	97	48.558	Vicugna_pacos
ENSHCOG00000002107	lrpprc	100	55.014	ENSXETG00000009296	lrpprc	97	55.014	Xenopus_tropicalis
ENSHCOG00000002107	lrpprc	100	63.682	ENSXCOG00000013343	lrpprc	97	65.709	Xiphophorus_couchianus
ENSHCOG00000002107	lrpprc	100	70.354	ENSXMAG00000018108	lrpprc	98	70.354	Xiphophorus_maculatus