EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000002211 (Gene tree)
Gene ID: 109528657
Gene Symbol: rbm10
Alias: si:ch73-205c16.2
Full Name: RNA-binding protein 10-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 18844 bases
Position: chrKV880338.1:4538480-4557323
Accession: 109528657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001279	zf-RanBP	PF00641.18	8.5e-08	1	1
ENSHCOP00000001279	RRM_1	PF00076.22	4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012439	-	939	XM_019890613	ENSHCOP00000001240	312 (aa)	XP_019746172	-
ENSHCOT00000012432	-	939	-	ENSHCOP00000001251	312 (aa)	-	-
ENSHCOT00000012416	-	654	-	ENSHCOP00000001256	217 (aa)	-	-
ENSHCOT00000012376	-	4105	XM_019891539	ENSHCOP00000001279	909 (aa)	XP_019747098	UPI00094E402D

Gene Model

Click here to download ENSHCOG00000002211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000002211	rbm10	74	43.615	ENSHCOG00000017110	rbm5	90	41.977
ENSHCOG00000002211	rbm10	78	39.895	ENSHCOG00000004536	-	81	40.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002211	rbm10	78	50.567	ENSG00000182872	RBM10	90	50.257	Homo_sapiens
ENSHCOG00000002211	rbm10	98	70.064	ENSAPOG00000018220	rbm10	98	70.494	Acanthochromis_polyacanthus
ENSHCOG00000002211	rbm10	78	49.244	ENSAMEG00000012961	RBM10	79	49.244	Ailuropoda_melanoleuca
ENSHCOG00000002211	rbm10	75	82.769	ENSACIG00000013859	rbm10	95	82.769	Amphilophus_citrinellus
ENSHCOG00000002211	rbm10	91	70.507	ENSAOCG00000022677	rbm10	98	70.737	Amphiprion_ocellaris
ENSHCOG00000002211	rbm10	98	70.386	ENSAPEG00000005675	rbm10	98	70.601	Amphiprion_percula
ENSHCOG00000002211	rbm10	100	69.885	ENSATEG00000023522	rbm10	98	70.204	Anabas_testudineus
ENSHCOG00000002211	rbm10	77	50.251	ENSACAG00000005527	RBM10	84	50.375	Anolis_carolinensis
ENSHCOG00000002211	rbm10	78	49.751	ENSANAG00000026392	-	90	49.305	Aotus_nancymaae
ENSHCOG00000002211	rbm10	77	43.671	ENSANAG00000033026	-	90	42.949	Aotus_nancymaae
ENSHCOG00000002211	rbm10	98	68.562	ENSACLG00000008773	rbm10	98	69.346	Astatotilapia_calliptera
ENSHCOG00000002211	rbm10	78	49.193	ENSBTAG00000002890	RBM10	90	48.861	Bos_taurus
ENSHCOG00000002211	rbm10	78	50.694	ENSCJAG00000012101	RBM10	82	50.256	Callithrix_jacchus
ENSHCOG00000002211	rbm10	79	46.494	ENSCAFG00000014863	RBM10	92	49.516	Canis_familiaris
ENSHCOG00000002211	rbm10	78	48.618	ENSCAFG00020021417	RBM10	78	48.790	Canis_lupus_dingo
ENSHCOG00000002211	rbm10	78	46.468	ENSCHIG00000000855	RBM10	90	46.096	Capra_hircus
ENSHCOG00000002211	rbm10	78	48.553	ENSTSYG00000030341	RBM10	93	48.387	Carlito_syrichta
ENSHCOG00000002211	rbm10	59	61.728	ENSCAPG00000013182	RBM10	80	61.022	Cavia_aperea
ENSHCOG00000002211	rbm10	78	50.884	ENSCPOG00000002939	RBM10	90	50.448	Cavia_porcellus
ENSHCOG00000002211	rbm10	78	49.501	ENSCCAG00000025788	RBM10	90	50.386	Cebus_capucinus
ENSHCOG00000002211	rbm10	78	50.567	ENSCATG00000018553	RBM10	93	48.787	Cercocebus_atys
ENSHCOG00000002211	rbm10	78	49.254	ENSCLAG00000001238	RBM10	90	49.936	Chinchilla_lanigera
ENSHCOG00000002211	rbm10	78	50.567	ENSCSAG00000013744	RBM10	79	50.694	Chlorocebus_sabaeus
ENSHCOG00000002211	rbm10	60	68.675	ENSCPBG00000000458	RBM10	73	68.675	Chrysemys_picta_bellii
ENSHCOG00000002211	rbm10	78	49.306	ENSCANG00000000359	RBM10	90	49.679	Colobus_angolensis_palliatus
ENSHCOG00000002211	rbm10	78	49.256	ENSCGRG00001017158	Rbm10	90	48.866	Cricetulus_griseus_chok1gshd
ENSHCOG00000002211	rbm10	78	49.256	ENSCGRG00000011339	Rbm10	90	48.866	Cricetulus_griseus_crigri
ENSHCOG00000002211	rbm10	98	66.011	ENSCVAG00000009548	rbm10	98	66.011	Cyprinodon_variegatus
ENSHCOG00000002211	rbm10	99	54.069	ENSDARG00000077400	rbm10	100	79.323	Danio_rerio
ENSHCOG00000002211	rbm10	55	60.156	ENSDNOG00000031259	RBM10	73	60.156	Dasypus_novemcinctus
ENSHCOG00000002211	rbm10	78	50.378	ENSDORG00000015022	Rbm10	90	49.936	Dipodomys_ordii
ENSHCOG00000002211	rbm10	73	46.433	ENSETEG00000003131	RBM10	79	46.299	Echinops_telfairi
ENSHCOG00000002211	rbm10	77	48.604	ENSEASG00005014310	RBM10	90	48.604	Equus_asinus_asinus
ENSHCOG00000002211	rbm10	78	50.000	ENSECAG00000000287	RBM10	90	49.559	Equus_caballus
ENSHCOG00000002211	rbm10	78	66.450	ENSELUG00000019845	rbm10	91	62.584	Esox_lucius
ENSHCOG00000002211	rbm10	78	50.441	ENSFCAG00000001395	RBM10	90	50.000	Felis_catus
ENSHCOG00000002211	rbm10	78	50.505	ENSFDAG00000002328	RBM10	90	50.064	Fukomys_damarensis
ENSHCOG00000002211	rbm10	99	65.405	ENSFHEG00000021050	rbm10	99	65.686	Fundulus_heteroclitus
ENSHCOG00000002211	rbm10	52	72.083	ENSGMOG00000011093	rbm10	100	72.083	Gadus_morhua
ENSHCOG00000002211	rbm10	52	75.764	ENSGACG00000009953	rbm10	100	77.236	Gasterosteus_aculeatus
ENSHCOG00000002211	rbm10	78	49.813	ENSGAGG00000001747	RBM10	85	51.072	Gopherus_agassizii
ENSHCOG00000002211	rbm10	78	50.567	ENSGGOG00000007869	RBM10	90	46.809	Gorilla_gorilla
ENSHCOG00000002211	rbm10	98	69.132	ENSHBUG00000000175	rbm10	98	69.346	Haplochromis_burtoni
ENSHCOG00000002211	rbm10	78	50.504	ENSHGLG00000000890	RBM10	90	50.064	Heterocephalus_glaber_female
ENSHCOG00000002211	rbm10	78	47.930	ENSHGLG00100001369	RBM10	90	47.754	Heterocephalus_glaber_male
ENSHCOG00000002211	rbm10	72	59.021	ENSIPUG00000014280	rbm10	90	60.153	Ictalurus_punctatus
ENSHCOG00000002211	rbm10	78	50.315	ENSSTOG00000014369	RBM10	90	50.064	Ictidomys_tridecemlineatus
ENSHCOG00000002211	rbm10	78	50.126	ENSJJAG00000014158	Rbm10	90	49.681	Jaculus_jaculus
ENSHCOG00000002211	rbm10	98	67.961	ENSKMAG00000019926	rbm10	98	67.961	Kryptolebias_marmoratus
ENSHCOG00000002211	rbm10	98	70.423	ENSLBEG00000007620	rbm10	98	70.423	Labrus_bergylta
ENSHCOG00000002211	rbm10	77	52.523	ENSLACG00000005251	RBM10	84	52.523	Latimeria_chalumnae
ENSHCOG00000002211	rbm10	72	64.928	ENSLOCG00000014304	rbm10	94	62.807	Lepisosteus_oculatus
ENSHCOG00000002211	rbm10	78	49.299	ENSLAFG00000002900	RBM10	90	48.214	Loxodonta_africana
ENSHCOG00000002211	rbm10	78	50.567	ENSMFAG00000032405	RBM10	90	50.257	Macaca_fascicularis
ENSHCOG00000002211	rbm10	78	50.441	ENSMMUG00000017423	RBM10	90	50.257	Macaca_mulatta
ENSHCOG00000002211	rbm10	78	50.567	ENSMNEG00000038904	RBM10	90	50.257	Macaca_nemestrina
ENSHCOG00000002211	rbm10	78	50.567	ENSMLEG00000042685	RBM10	90	50.257	Mandrillus_leucophaeus
ENSHCOG00000002211	rbm10	98	67.735	ENSMAMG00000008925	rbm10	98	68.590	Mastacembelus_armatus
ENSHCOG00000002211	rbm10	98	68.562	ENSMZEG00005027122	rbm10	98	69.239	Maylandia_zebra
ENSHCOG00000002211	rbm10	77	49.229	ENSMAUG00000011595	Rbm10	90	49.617	Mesocricetus_auratus
ENSHCOG00000002211	rbm10	78	50.315	ENSMICG00000016937	RBM10	93	49.191	Microcebus_murinus
ENSHCOG00000002211	rbm10	78	49.496	ENSMOCG00000022485	Rbm10	90	49.680	Microtus_ochrogaster
ENSHCOG00000002211	rbm10	74	52.401	ENSMODG00000010640	RBM10	81	52.186	Monodelphis_domestica
ENSHCOG00000002211	rbm10	98	70.224	ENSMALG00000011917	rbm10	98	70.438	Monopterus_albus
ENSHCOG00000002211	rbm10	78	49.317	MGP_CAROLIEiJ_G0032963	Rbm10	90	48.866	Mus_caroli
ENSHCOG00000002211	rbm10	78	49.256	ENSMUSG00000031060	Rbm10	90	48.805	Mus_musculus
ENSHCOG00000002211	rbm10	78	49.441	MGP_PahariEiJ_G0031506	Rbm10	90	48.992	Mus_pahari
ENSHCOG00000002211	rbm10	68	61.212	MGP_SPRETEiJ_G0034113	Rbm10	66	60.502	Mus_spretus
ENSHCOG00000002211	rbm10	78	48.492	ENSMPUG00000013129	RBM10	74	49.121	Mustela_putorius_furo
ENSHCOG00000002211	rbm10	78	50.188	ENSNGAG00000019664	Rbm10	90	50.257	Nannospalax_galili
ENSHCOG00000002211	rbm10	78	39.034	ENSNLEG00000003018	RBM10	90	39.050	Nomascus_leucogenys
ENSHCOG00000002211	rbm10	50	62.637	ENSMEUG00000009028	RBM10	58	62.637	Notamacropus_eugenii
ENSHCOG00000002211	rbm10	78	49.437	ENSODEG00000008955	RBM10	90	49.936	Octodon_degus
ENSHCOG00000002211	rbm10	98	68.777	ENSONIG00000012370	rbm10	99	69.507	Oreochromis_niloticus
ENSHCOG00000002211	rbm10	79	46.484	ENSOANG00000004552	RBM10	85	46.354	Ornithorhynchus_anatinus
ENSHCOG00000002211	rbm10	78	49.244	ENSOCUG00000006454	RBM10	84	49.370	Oryctolagus_cuniculus
ENSHCOG00000002211	rbm10	98	64.995	ENSORLG00000008657	rbm10	98	64.995	Oryzias_latipes
ENSHCOG00000002211	rbm10	98	64.617	ENSORLG00020004636	rbm10	98	64.617	Oryzias_latipes_hni
ENSHCOG00000002211	rbm10	98	64.885	ENSORLG00015021021	rbm10	98	64.885	Oryzias_latipes_hsok
ENSHCOG00000002211	rbm10	98	63.940	ENSOMEG00000014309	rbm10	98	63.910	Oryzias_melastigma
ENSHCOG00000002211	rbm10	78	51.010	ENSOGAG00000008550	RBM10	79	51.136	Otolemur_garnettii
ENSHCOG00000002211	rbm10	76	46.999	ENSOARG00000013674	RBM10	76	46.999	Ovis_aries
ENSHCOG00000002211	rbm10	78	49.937	ENSPPAG00000040583	RBM10	90	50.257	Pan_paniscus
ENSHCOG00000002211	rbm10	78	49.057	ENSPPRG00000023784	RBM10	90	48.597	Panthera_pardus
ENSHCOG00000002211	rbm10	60	65.328	ENSPTIG00000017219	RBM10	83	60.510	Panthera_tigris_altaica
ENSHCOG00000002211	rbm10	78	49.937	ENSPTRG00000021837	RBM10	90	48.615	Pan_troglodytes
ENSHCOG00000002211	rbm10	78	50.567	ENSPANG00000013608	RBM10	93	48.787	Papio_anubis
ENSHCOG00000002211	rbm10	97	54.309	ENSPKIG00000007372	rbm10	95	61.576	Paramormyrops_kingsleyae
ENSHCOG00000002211	rbm10	78	49.434	ENSPEMG00000012165	Rbm10	90	49.617	Peromyscus_maniculatus_bairdii
ENSHCOG00000002211	rbm10	78	49.250	ENSPCIG00000027962	RBM10	85	49.250	Phascolarctos_cinereus
ENSHCOG00000002211	rbm10	74	71.650	ENSPFOG00000005428	rbm10	92	72.214	Poecilia_formosa
ENSHCOG00000002211	rbm10	98	67.067	ENSPLAG00000013887	rbm10	98	67.067	Poecilia_latipinna
ENSHCOG00000002211	rbm10	98	67.394	ENSPMEG00000005032	rbm10	98	67.394	Poecilia_mexicana
ENSHCOG00000002211	rbm10	100	67.457	ENSPREG00000019319	rbm10	98	67.179	Poecilia_reticulata
ENSHCOG00000002211	rbm10	78	46.999	ENSPPYG00000020285	RBM10	83	46.784	Pongo_abelii
ENSHCOG00000002211	rbm10	78	44.095	ENSPCAG00000000239	RBM10	84	44.793	Procavia_capensis
ENSHCOG00000002211	rbm10	78	49.182	ENSPCOG00000023562	RBM10	93	45.895	Propithecus_coquereli
ENSHCOG00000002211	rbm10	54	43.490	ENSPVAG00000006787	RBM10	57	43.490	Pteropus_vampyrus
ENSHCOG00000002211	rbm10	98	68.455	ENSPNYG00000015230	rbm10	98	69.132	Pundamilia_nyererei
ENSHCOG00000002211	rbm10	95	54.664	ENSPNAG00000011074	rbm10	98	55.361	Pygocentrus_nattereri
ENSHCOG00000002211	rbm10	78	50.126	ENSRNOG00000008472	Rbm10	90	49.616	Rattus_norvegicus
ENSHCOG00000002211	rbm10	77	50.257	ENSRBIG00000040371	RBM10	90	50.257	Rhinopithecus_bieti
ENSHCOG00000002211	rbm10	78	48.500	ENSRROG00000043355	RBM10	90	48.846	Rhinopithecus_roxellana
ENSHCOG00000002211	rbm10	77	50.386	ENSSBOG00000022873	RBM10	90	50.386	Saimiri_boliviensis_boliviensis
ENSHCOG00000002211	rbm10	78	30.233	ENSSHAG00000007724	-	82	30.930	Sarcophilus_harrisii
ENSHCOG00000002211	rbm10	80	61.250	ENSSFOG00015010701	rbm10	79	61.519	Scleropages_formosus
ENSHCOG00000002211	rbm10	99	68.671	ENSSMAG00000006556	rbm10	98	68.483	Scophthalmus_maximus
ENSHCOG00000002211	rbm10	98	71.838	ENSSLDG00000001390	rbm10	98	71.838	Seriola_lalandi_dorsalis
ENSHCOG00000002211	rbm10	50	62.443	ENSSARG00000014122	RBM10	50	62.443	Sorex_araneus
ENSHCOG00000002211	rbm10	79	72.188	ENSSPAG00000004647	rbm10	90	72.340	Stegastes_partitus
ENSHCOG00000002211	rbm10	78	50.946	ENSSSCG00000012271	RBM10	90	50.512	Sus_scrofa
ENSHCOG00000002211	rbm10	100	64.533	ENSTRUG00000010215	rbm10	98	65.059	Takifugu_rubripes
ENSHCOG00000002211	rbm10	88	67.012	ENSTNIG00000015014	rbm10	90	68.531	Tetraodon_nigroviridis
ENSHCOG00000002211	rbm10	78	48.802	ENSTTRG00000013653	RBM10	84	48.802	Tursiops_truncatus
ENSHCOG00000002211	rbm10	77	45.817	ENSUAMG00000026047	RBM10	92	47.050	Ursus_americanus
ENSHCOG00000002211	rbm10	78	50.514	ENSVVUG00000014315	RBM10	84	50.514	Vulpes_vulpes